FFCP PHASE1:Hg19::chr8:19171196..19171216,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63898 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26102 | |||
|TSSclassifier=strong | |||
|UniProt=B4DDR1 | |||
|association_with_transcript=0bp_to_ENST00000518040,uc003wzb.2,uc011kym.1_5end | |||
|cluster_id=chr8:19171196..19171216,+ | |||
|description=CAGE_peak_1_at_SH2D4A_5end | |||
|id=chr8:19171196..19171216,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.19e-20!180;CL:0000057!1.24e-17!75;CL:0002620!4.56e-11!23;CL:0000680!4.14e-10!57;CL:0000056!4.14e-10!57;CL:0000355!4.14e-10!57;CL:0000192!6.45e-10!42;CL:0000514!6.45e-10!42;CL:0000187!7.31e-10!54;CL:0000359!7.47e-09!32;CL:0000183!4.88e-08!59;CL:0000393!1.12e-07!60;CL:0000211!1.12e-07!60;CL:0000077!1.14e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.46e-11;23!CL:0000359;1.68e-08;32!CL:0000192;3.62e-08;43!CL:0000077;9.95e-08;19!CL:0000057;5.72e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.79e-19,76;CL:0002620,9.75e-12,23;CL:0000680,1.64e-10,58;CL:0000056,1.64e-10,58;CL:0000355,1.64e-10,58;CL:0000192,3.00e-10,43;CL:0000514,3.00e-10,43;CL:0000187,3.05e-10,55;CL:0000359,4.89e-09,32;CL:0000077,8.50e-08,19;CL:0000393,1.72e-07,61;CL:0000211,1.72e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;3.62e-08;43 | |||
|ontology_enrichment_disease=DOID:305!3.46e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.85e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.12e-16!238;UBERON:0009142!1.12e-16!238;UBERON:0004119!5.23e-16!169;UBERON:0000925!5.23e-16!169;UBERON:0006595!5.23e-16!169;UBERON:0000475!1.29e-15!365;UBERON:0002100!2.22e-15!216;UBERON:0000481!4.14e-15!347;UBERON:0001007!1.08e-14!155;UBERON:0001555!1.08e-14!155;UBERON:0007026!1.08e-14!155;UBERON:0003102!3.72e-14!95;UBERON:0005256!7.68e-14!143;UBERON:0000077!6.15e-12!130;UBERON:0001048!1.13e-11!168;UBERON:0000914!1.94e-11!83;UBERON:0002329!1.94e-11!83;UBERON:0003077!1.94e-11!83;UBERON:0003059!1.94e-11!83;UBERON:0007282!1.94e-11!83;UBERON:0009618!1.94e-11!83;UBERON:0007285!1.94e-11!83;UBERON:0004921!5.72e-11!129;UBERON:0004185!5.72e-11!129;UBERON:0004290!3.13e-10!70;UBERON:0000062!3.76e-10!511;UBERON:0000486!4.05e-10!82;UBERON:0000468!6.68e-10!659;UBERON:0004923!1.34e-09!57;UBERON:0002385!2.37e-09!63;UBERON:0001015!2.37e-09!63;UBERON:0000383!2.37e-09!63;UBERON:0001134!4.26e-09!61;UBERON:0002036!4.26e-09!61;UBERON:0003082!4.26e-09!61;UBERON:0000467!4.27e-09!625;UBERON:0000480!5.16e-09!626;UBERON:0002097!2.60e-08!40;UBERON:0002199!4.56e-08!45;UBERON:0002416!4.56e-08!45;UBERON:0005156!1.40e-07!59;UBERON:0000990!1.40e-07!59;UBERON:0000490!1.91e-07!138;UBERON:0001041!2.52e-07!98;UBERON:0000926!6.32e-07!448;UBERON:0004120!6.32e-07!448;UBERON:0006603!6.32e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.43e-15,160;UBERON:0000925,2.43e-15,160;UBERON:0006595,2.43e-15,160;UBERON:0002100,5.39e-14,199;UBERON:0005256,5.95e-14,122;UBERON:0001007,7.10e-14,145;UBERON:0001555,7.10e-14,145;UBERON:0007026,7.10e-14,145;UBERON:0003102,8.61e-14,99;UBERON:0002329,1.31e-10,71;UBERON:0003059,1.31e-10,71;UBERON:0007282,1.31e-10,71;UBERON:0004290,1.31e-10,71;UBERON:0009618,1.31e-10,71;UBERON:0007524,1.99e-10,73;UBERON:0000486,2.00e-10,83;UBERON:0004923,2.69e-10,66;UBERON:0003077,3.73e-10,72;UBERON:0007285,3.73e-10,72;UBERON:0004921,3.80e-10,118;UBERON:0003104,4.46e-10,160;UBERON:0009142,4.46e-10,160;UBERON:0002385,1.14e-09,64;UBERON:0001015,1.14e-09,64;UBERON:0000383,1.14e-09,64;UBERON:0001048,1.66e-09,160;UBERON:0001134,2.14e-09,62;UBERON:0002036,2.14e-09,62;UBERON:0003082,2.14e-09,62;UBERON:0007503,1.21e-08,78;UBERON:0002097,1.71e-08,41;UBERON:0000490,1.86e-08,148;UBERON:0002199,2.25e-08,46;UBERON:0002416,2.25e-08,46;UBERON:0005156,3.20e-07,59;UBERON:0000990,3.20e-07,59 | |||
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| |||
|short_description=p1@SH2D4A | |||
}} |
Latest revision as of 07:09, 17 September 2015
Short description: | p1@SH2D4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SH2D4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000518040, uc003wzb.2, uc011kym.1_5end |
EntrezGene: | SH2D4A |
HGNC: | 26102 |
UniProt: | B4DDR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.79e-19 | 76 |
skin fibroblast | 9.75e-12 | 23 |
muscle precursor cell | 1.64e-10 | 58 |
myoblast | 1.64e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.64e-10 | 58 |
smooth muscle cell | 3.00e-10 | 43 |
smooth muscle myoblast | 3.00e-10 | 43 |
muscle cell | 3.05e-10 | 55 |
vascular associated smooth muscle cell | 4.89e-09 | 32 |
mesothelial cell | 8.50e-08 | 19 |
electrically responsive cell | 1.72e-07 | 61 |
electrically active cell | 1.72e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.85e-07 | 106 |