FFCP PHASE1:Hg19::chr4:20255123..20255132,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9353 | |EntrezGene=9353 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11086 | |HGNC=11086 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-54bp_to_ENST00000504154_5end | |association_with_transcript=-54bp_to_ENST00000504154_5end | ||
|cluster_id=chr4:20255123..20255132,+ | |||
|description=CAGE_peak_8_at_SLIT2_5end | |description=CAGE_peak_8_at_SLIT2_5end | ||
|id=chr4:20255123..20255132,+ | |id=chr4:20255123..20255132,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.39e-66;1!UBERON:0010122;5.04e-34;2!UBERON:0007297;5.04e-34;2!UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!6.10e-15!41;UBERON:0001890!6.10e-15!41;UBERON:0006240!6.10e-15!41;UBERON:0001893!6.16e-15!34;UBERON:0007023!1.18e-14!115;UBERON:0003080!1.84e-14!42;UBERON:0002791!1.29e-13!33;UBERON:0001869!9.88e-13!32;UBERON:0002020!1.25e-11!34;UBERON:0003528!1.25e-11!34;UBERON:0001049!1.80e-11!57;UBERON:0005068!1.80e-11!57;UBERON:0006241!1.80e-11!57;UBERON:0007135!1.80e-11!57;UBERON:0000955!2.07e-11!69;UBERON:0006238!2.07e-11!69;UBERON:0002616!6.83e-11!59;UBERON:0003056!1.79e-10!61;UBERON:0001017!1.80e-10!82;UBERON:0001950!5.02e-10!20;UBERON:0002346!5.61e-10!90;UBERON:0000073!8.43e-10!94;UBERON:0001016!8.43e-10!94;UBERON:0005743!1.12e-09!86;UBERON:0000369!2.81e-09!4;UBERON:0002435!2.81e-09!4;UBERON:0000204!2.81e-09!4;UBERON:0010082!2.81e-09!4;UBERON:0000200!4.04e-09!6;UBERON:0002619!6.30e-09!22;UBERON:0003075!7.28e-09!86;UBERON:0007284!7.28e-09!86;UBERON:0002420!5.61e-08!9;UBERON:0007245!5.61e-08!9;UBERON:0010009!5.61e-08!9;UBERON:0010011!5.61e-08!9;UBERON:0000454!5.61e-08!9;UBERON:0000956!1.32e-07!25;UBERON:0000203!1.32e-07!25;UBERON:0009663!1.35e-07!7;UBERON:0005383!3.14e-07!3;UBERON:0005382!3.14e-07!3 | |ontology_enrichment_uberon=UBERON:0002780!6.10e-15!41;UBERON:0001890!6.10e-15!41;UBERON:0006240!6.10e-15!41;UBERON:0001893!6.16e-15!34;UBERON:0007023!1.18e-14!115;UBERON:0003080!1.84e-14!42;UBERON:0002791!1.29e-13!33;UBERON:0001869!9.88e-13!32;UBERON:0002020!1.25e-11!34;UBERON:0003528!1.25e-11!34;UBERON:0001049!1.80e-11!57;UBERON:0005068!1.80e-11!57;UBERON:0006241!1.80e-11!57;UBERON:0007135!1.80e-11!57;UBERON:0000955!2.07e-11!69;UBERON:0006238!2.07e-11!69;UBERON:0002616!6.83e-11!59;UBERON:0003056!1.79e-10!61;UBERON:0001017!1.80e-10!82;UBERON:0001950!5.02e-10!20;UBERON:0002346!5.61e-10!90;UBERON:0000073!8.43e-10!94;UBERON:0001016!8.43e-10!94;UBERON:0005743!1.12e-09!86;UBERON:0000369!2.81e-09!4;UBERON:0002435!2.81e-09!4;UBERON:0000204!2.81e-09!4;UBERON:0010082!2.81e-09!4;UBERON:0000200!4.04e-09!6;UBERON:0002619!6.30e-09!22;UBERON:0003075!7.28e-09!86;UBERON:0007284!7.28e-09!86;UBERON:0002420!5.61e-08!9;UBERON:0007245!5.61e-08!9;UBERON:0010009!5.61e-08!9;UBERON:0010011!5.61e-08!9;UBERON:0000454!5.61e-08!9;UBERON:0000956!1.32e-07!25;UBERON:0000203!1.32e-07!25;UBERON:0009663!1.35e-07!7;UBERON:0005383!3.14e-07!3;UBERON:0005382!3.14e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.39e-66;1!UBERON:0006868;2.39e-66;1!UBERON:0001873;5.04e-34;2!UBERON:0006947;3.27e-23;3!UBERON:0005383;3.27e-23;3!UBERON:0004054;3.27e-23;3!UBERON:0005382;3.27e-23;3!UBERON:0000369;8.69e-18;4!UBERON:0002435;8.69e-18;4!UBERON:0005904;8.69e-18;4!UBERON:0000204;8.69e-18;4!UBERON:0009663;8.99e-11;7!UBERON:0000473;1.35e-09;8!UBERON:0002420;1.12e-08;9!UBERON:0000125;1.12e-08;9!UBERON:0007245;1.12e-08;9!UBERON:0002308;1.12e-08;9!UBERON:0010009;1.12e-08;9!UBERON:0010011;1.12e-08;9!UBERON:0000454;1.12e-08;9!UBERON:0000058;6.13e-08;10!UBERON:0003135;2.47e-07;11!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | |||
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| ||
|short_description=p8@SLIT2 | |short_description=p8@SLIT2 | ||
}} | }} |
Latest revision as of 07:18, 17 September 2015
Short description: | p8@SLIT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLIT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENST00000504154_5end |
EntrezGene: | SLIT2 |
HGNC: | 11086 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 4.66e-66 | 1 |
seminal fluid secreting gland | 4.66e-66 | 1 |
caudate nucleus | 3.61e-34 | 2 |
future caudate nucleus | 3.61e-34 | 2 |
caudate-putamen | 2.62e-23 | 3 |
dorsal striatum | 2.62e-23 | 3 |
male genital duct | 4.09e-23 | 3 |
internal male genitalia | 4.09e-23 | 3 |
corpus striatum | 7.35e-18 | 4 |
striatum | 7.35e-18 | 4 |
ventral part of telencephalon | 7.35e-18 | 4 |
future corpus striatum | 7.35e-18 | 4 |
duct of male reproductive system | 1.03e-17 | 4 |
telencephalic nucleus | 8.16e-11 | 7 |
testis | 1.47e-09 | 8 |
basal ganglion | 1.04e-08 | 9 |
neural nucleus | 1.04e-08 | 9 |
nuclear complex of neuraxis | 1.04e-08 | 9 |
nucleus of brain | 1.04e-08 | 9 |
aggregate regional part of brain | 1.04e-08 | 9 |
collection of basal ganglia | 1.04e-08 | 9 |
cerebral subcortex | 1.04e-08 | 9 |
mesonephros | 1.21e-08 | 9 |
pronephros | 1.21e-08 | 9 |
nephrogenic cord | 1.21e-08 | 9 |
pronephric mesoderm | 1.21e-08 | 9 |
rostral part of nephrogenic cord | 1.21e-08 | 9 |
presumptive pronephric mesoderm | 1.21e-08 | 9 |
male reproductive organ | 2.63e-07 | 11 |
urogenital ridge | 2.63e-07 | 11 |
sex gland | 8.38e-07 | 12 |
male reproductive gland | 8.38e-07 | 12 |
intraembryonic coelom | 8.38e-07 | 12 |