FFCP PHASE1:Hg19::chr10:14372834..14372846,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55691 | |EntrezGene=55691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25491 | |HGNC=25491 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2Q2 | |UniProt=Q9P2Q2 | ||
|association_with_transcript=19bp_to_NM_018027,uc001ims.2,uc009xjf.1_5end | |association_with_transcript=19bp_to_NM_018027,uc001ims.2,uc009xjf.1_5end | ||
|cluster_id=chr10:14372834..14372846,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_12_at_FRMD4A_5end | |description=CAGE_peak_12_at_FRMD4A_5end | ||
|id=chr10:14372834..14372846,- | |id=chr10:14372834..14372846,- | ||
|ontology_enrichment_celltype=CL:0000077!5.12e-07!19 | |ontology_enrichment_celltype=CL:0000077!5.12e-07!19 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.47e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!9.93e-67!34;UBERON:0001869!1.79e-66!32;UBERON:0002619!2.29e-65!22;UBERON:0002791!1.19e-63!33;UBERON:0002020!1.04e-61!34;UBERON:0003528!1.04e-61!34;UBERON:0001950!1.69e-59!20;UBERON:0002780!3.49e-58!41;UBERON:0001890!3.49e-58!41;UBERON:0006240!3.49e-58!41;UBERON:0000956!4.33e-57!25;UBERON:0000203!4.33e-57!25;UBERON:0003080!1.22e-56!42;UBERON:0001049!2.34e-55!57;UBERON:0005068!2.34e-55!57;UBERON:0006241!2.34e-55!57;UBERON:0007135!2.34e-55!57;UBERON:0001017!7.03e-51!82;UBERON:0005743!1.14e-50!86;UBERON:0002616!4.79e-50!59;UBERON:0000955!1.38e-46!69;UBERON:0006238!1.38e-46!69;UBERON:0000073!5.70e-45!94;UBERON:0001016!5.70e-45!94;UBERON:0003056!3.77e-42!61;UBERON:0003075!1.21e-40!86;UBERON:0007284!1.21e-40!86;UBERON:0002346!2.01e-38!90;UBERON:0007023!9.37e-32!115;UBERON:0000033!3.46e-27!123;UBERON:0000153!4.99e-27!129;UBERON:0007811!4.99e-27!129;UBERON:0004121!2.62e-23!169;UBERON:0000924!1.56e-22!173;UBERON:0006601!1.56e-22!173;UBERON:0000200!6.49e-20!6;UBERON:0001871!1.20e-19!7;UBERON:0001872!5.47e-17!5;UBERON:0002021!8.31e-17!5;UBERON:0000349!2.62e-16!5;UBERON:0000025!6.81e-13!194;UBERON:0002420!4.96e-12!9;UBERON:0007245!4.96e-12!9;UBERON:0010009!4.96e-12!9;UBERON:0010011!4.96e-12!9;UBERON:0000454!4.96e-12!9;UBERON:0002771!1.04e-10!3;UBERON:0000064!2.30e-10!219;UBERON:0004111!1.15e-08!241;UBERON:0002308!3.53e-08!9;UBERON:0000125!3.53e-08!9;UBERON:0001870!5.29e-08!2;UBERON:0000477!1.00e-07!286;UBERON:0000369!1.19e-07!4;UBERON:0002435!1.19e-07!4;UBERON:0000204!1.19e-07!4;UBERON:0010082!1.19e-07!4;UBERON:0001876!1.28e-07!2;UBERON:0001954!2.01e-07!2;UBERON:0003022!2.01e-07!2;UBERON:0002421!2.01e-07!2;UBERON:0002600!2.01e-07!2;UBERON:0000475!3.63e-07!365;UBERON:0009663!3.77e-07!7;UBERON:0000483!5.21e-07!309;UBERON:0000119!7.43e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.79e-113;22!UBERON:0001950;1.17e-101;20!UBERON:0000956;2.18e-99;25!UBERON:0000203;2.18e-99;25!UBERON:0001869;2.46e-82;32!UBERON:0001893;3.35e-75;34!UBERON:0002791;3.55e-74;32!UBERON:0003528;1.12e-69;34!UBERON:0002020;1.12e-69;34!UBERON:0002780;1.84e-50;41!UBERON:0001890;1.84e-50;41!UBERON:0000200;2.72e-36;6!UBERON:0000073;5.09e-31;53!UBERON:0002616;5.09e-31;53!UBERON:0001872;8.20e-31;5!UBERON:0002021;1.47e-30;5!UBERON:0001871;9.83e-22;6!UBERON:0000955;1.02e-19;68!UBERON:0001870;1.62e-19;3!UBERON:0000349;1.72e-19;5!UBERON:0001017;6.08e-17;75!UBERON:0001016;1.69e-15;83!UBERON:0002702;1.94e-13;2!UBERON:0002771;4.32e-13;2!UBERON:0001954;9.54e-13;2!UBERON:0003022;9.54e-13;2!UBERON:0002421;9.54e-13;2!UBERON:0002600;9.54e-13;2!UBERON:0007190;8.26e-08;1!UBERON:0002022;1.47e-07;1!UBERON:0003112;1.47e-07;1!UBERON:0011158;1.47e-07;1!UBERON:0003128;1.47e-07;1!UBERON:0001703;1.47e-07;1!UBERON:0002241;1.47e-07;1!UBERON:0011216;2.41e-07;132!UBERON:0002581;3.30e-07;1!UBERON:0002902;3.30e-07;1!UBERON:0001882;3.30e-07;1!UBERON:0009899;3.30e-07;1!UBERON:0005403;3.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.49e-113,22;UBERON:0001950,2.46e-102,20;UBERON:0000956,5.71e-100,25;UBERON:0000203,5.71e-100,25;UBERON:0001869,5.67e-94,32;UBERON:0001893,2.40e-88,34;UBERON:0002791,1.33e-85,32;UBERON:0003528,1.84e-80,34;UBERON:0002020,1.84e-80,34;UBERON:0002780,7.26e-73,41;UBERON:0001890,7.26e-73,41;UBERON:0003080,7.26e-73,41;UBERON:0006240,7.26e-73,41;UBERON:0000073,1.17e-55,53;UBERON:0002616,1.17e-55,53;UBERON:0001049,1.74e-52,56;UBERON:0005068,1.74e-52,56;UBERON:0006241,1.74e-52,56;UBERON:0007135,1.74e-52,56;UBERON:0003056,7.01e-48,61;UBERON:0000955,9.78e-46,68;UBERON:0006238,9.78e-46,68;UBERON:0001017,3.24e-41,81;UBERON:0001016,1.06e-36,89;UBERON:0000200,1.48e-36,6;UBERON:0003075,1.36e-34,82;UBERON:0007284,1.36e-34,82;UBERON:0002346,8.71e-33,86;UBERON:0001872,5.87e-31,5;UBERON:0002021,1.31e-30,5;UBERON:0010371,2.31e-26,104;UBERON:0001871,6.53e-22,6;UBERON:0010314,7.53e-22,132;UBERON:0001870,1.15e-19,3;UBERON:0000349,1.23e-19,5;UBERON:0007023,2.16e-19,114;UBERON:0004121,4.66e-17,171;UBERON:0000924,4.66e-17,171;UBERON:0006601,4.66e-17,171;UBERON:0011216,1.62e-14,223;UBERON:0002702,1.42e-13,2;UBERON:0002771,4.07e-13,2;UBERON:0001954,1.01e-12,2;UBERON:0003022,1.01e-12,2;UBERON:0002421,1.01e-12,2;UBERON:0002600,1.01e-12,2;UBERON:0000025,3.41e-12,192;UBERON:0004111,7.88e-09,240;UBERON:0007190,9.71e-08,1;UBERON:0002022,1.03e-07,1;UBERON:0003112,1.83e-07,1;UBERON:0011158,1.83e-07,1;UBERON:0003128,1.83e-07,1;UBERON:0001703,1.83e-07,1;UBERON:0002241,1.83e-07,1;UBERON:0004761,1.83e-07,1;UBERON:0009617,1.83e-07,1;UBERON:0002581,2.21e-07,1;UBERON:0001882,2.35e-07,1;UBERON:0005403,2.35e-07,1;UBERON:0002902,2.50e-07,1;UBERON:0009899,2.50e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,1.09970290300263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,0.703347082052564,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.29875337426592,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.221158519862449,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,2.44858209304392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60871536948509,0,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,1.59045937961861,1.36203406111576,0,0,0,0,0,2.97672827624321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.70836770862748,2.3786276834235,0,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,1.05180326298053,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,2.08795433572169,0,0,0,0.358177682162975,0,1.09642024789354,0,0,0,0,0.690860683462397,0.303859956177382,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92687675289379,9.91876034279095,2.39450788585727,1.64093091392604,2.01657356977374,1.86724581653388,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03919130782776,3.12431239445539,2.48024155801421,2.21955335678674,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.339848664884159,1.97318320688547,0,0,0,0.942693539496011,0,0,3.88669664193519,1.43325506366115,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76777874496378,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,1.09970290300263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,0.703347082052564,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.29875337426592,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.221158519862449,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,2.44858209304392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60871536948509,0,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,1.59045937961861,1.36203406111576,0,0,0,0,0,2.97672827624321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.70836770862748,2.3786276834235,0,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,1.05180326298053,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,2.08795433572169,0,0,0,0.358177682162975,0,1.09642024789354,0,0,0,0,0.690860683462397,0.303859956177382,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92687675289379,9.91876034279095,2.39450788585727,1.64093091392604,2.01657356977374,1.86724581653388,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03919130782776,3.12431239445539,2.48024155801421,2.21955335678674,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.339848664884159,1.97318320688547,0,0,0,0.942693539496011,0,0,3.88669664193519,1.43325506366115,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76777874496378,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@FRMD4A | |short_description=p12@FRMD4A | ||
}} | }} |
Latest revision as of 07:20, 17 September 2015
Short description: | p12@FRMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FRMD4A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 19bp_to_NM_018027, uc001ims.2, uc009xjf.1_5end |
EntrezGene: | FRMD4A |
HGNC: | 25491 |
UniProt: | Q9P2Q2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data