FFCP PHASE1:Hg19::chr19:34856141..34856156,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2821 | |EntrezGene=2821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4458 | |HGNC=4458 | ||
|TSSclassifier=strong | |||
|UniProt=Q59F85 | |UniProt=Q59F85 | ||
|association_with_transcript=2bp_to_ENST00000392234,uc002nvh.1_5end | |association_with_transcript=2bp_to_ENST00000392234,uc002nvh.1_5end | ||
|cluster_id=chr19:34856141..34856156,+ | |||
|description=CAGE_peak_3_at_GPI_5end | |description=CAGE_peak_3_at_GPI_5end | ||
|id=chr19:34856141..34856156,+ | |id=chr19:34856141..34856156,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.28e-08!180;CL:0000359!4.41e-08!32;CL:0000183!8.50e-07!59 | |ontology_enrichment_celltype=CL:0000055!2.28e-08!180;CL:0000359!4.41e-08!32;CL:0000183!8.50e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.73e-07;32 | |ontology_enrichment_celltype_v019=CL:0000359;1.73e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.41e-08,32 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.41e-14!194;UBERON:0000119!1.35e-11!312;UBERON:0001637!1.76e-11!42;UBERON:0003509!1.76e-11!42;UBERON:0004572!1.76e-11!42;UBERON:0001869!4.46e-11!32;UBERON:0002619!5.13e-11!22;UBERON:0000483!6.32e-11!309;UBERON:0001981!1.09e-10!60;UBERON:0007500!1.09e-10!60;UBERON:0004537!1.09e-10!60;UBERON:0006965!1.09e-10!60;UBERON:0002049!1.13e-10!79;UBERON:0007798!1.13e-10!79;UBERON:0000055!3.10e-10!69;UBERON:0003075!3.18e-10!86;UBERON:0007284!3.18e-10!86;UBERON:0003056!3.42e-10!61;UBERON:0002020!4.24e-10!34;UBERON:0003528!4.24e-10!34;UBERON:0001893!4.63e-10!34;UBERON:0004872!5.81e-10!84;UBERON:0002616!5.92e-10!59;UBERON:0001950!6.13e-10!20;UBERON:0000955!7.48e-10!69;UBERON:0006238!7.48e-10!69;UBERON:0001017!1.13e-09!82;UBERON:0001049!1.39e-09!57;UBERON:0005068!1.39e-09!57;UBERON:0006241!1.39e-09!57;UBERON:0007135!1.39e-09!57;UBERON:0002791!1.73e-09!33;UBERON:0005743!1.88e-09!86;UBERON:0002346!2.38e-09!90;UBERON:0002780!3.48e-09!41;UBERON:0001890!3.48e-09!41;UBERON:0006240!3.48e-09!41;UBERON:0000956!3.58e-09!25;UBERON:0000203!3.58e-09!25;UBERON:0004535!6.43e-09!110;UBERON:0001009!8.00e-09!113;UBERON:0000477!9.59e-09!286;UBERON:0003080!2.03e-08!42;UBERON:0003914!2.17e-08!118;UBERON:0004111!2.18e-08!241;UBERON:0004573!2.79e-08!33;UBERON:0004571!2.79e-08!33;UBERON:0000073!4.90e-08!94;UBERON:0001016!4.90e-08!94 | |ontology_enrichment_uberon=UBERON:0000025!2.41e-14!194;UBERON:0000119!1.35e-11!312;UBERON:0001637!1.76e-11!42;UBERON:0003509!1.76e-11!42;UBERON:0004572!1.76e-11!42;UBERON:0001869!4.46e-11!32;UBERON:0002619!5.13e-11!22;UBERON:0000483!6.32e-11!309;UBERON:0001981!1.09e-10!60;UBERON:0007500!1.09e-10!60;UBERON:0004537!1.09e-10!60;UBERON:0006965!1.09e-10!60;UBERON:0002049!1.13e-10!79;UBERON:0007798!1.13e-10!79;UBERON:0000055!3.10e-10!69;UBERON:0003075!3.18e-10!86;UBERON:0007284!3.18e-10!86;UBERON:0003056!3.42e-10!61;UBERON:0002020!4.24e-10!34;UBERON:0003528!4.24e-10!34;UBERON:0001893!4.63e-10!34;UBERON:0004872!5.81e-10!84;UBERON:0002616!5.92e-10!59;UBERON:0001950!6.13e-10!20;UBERON:0000955!7.48e-10!69;UBERON:0006238!7.48e-10!69;UBERON:0001017!1.13e-09!82;UBERON:0001049!1.39e-09!57;UBERON:0005068!1.39e-09!57;UBERON:0006241!1.39e-09!57;UBERON:0007135!1.39e-09!57;UBERON:0002791!1.73e-09!33;UBERON:0005743!1.88e-09!86;UBERON:0002346!2.38e-09!90;UBERON:0002780!3.48e-09!41;UBERON:0001890!3.48e-09!41;UBERON:0006240!3.48e-09!41;UBERON:0000956!3.58e-09!25;UBERON:0000203!3.58e-09!25;UBERON:0004535!6.43e-09!110;UBERON:0001009!8.00e-09!113;UBERON:0000477!9.59e-09!286;UBERON:0003080!2.03e-08!42;UBERON:0003914!2.17e-08!118;UBERON:0004111!2.18e-08!241;UBERON:0004573!2.79e-08!33;UBERON:0004571!2.79e-08!33;UBERON:0000073!4.90e-08!94;UBERON:0001016!4.90e-08!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.83e-11;22!UBERON:0001869;4.78e-10;32!UBERON:0001950;5.76e-10;20!UBERON:0001893;3.43e-09;34!UBERON:0000956;3.52e-09;25!UBERON:0000203;3.52e-09;25!UBERON:0003528;3.86e-09;34!UBERON:0002020;3.86e-09;34!UBERON:0002791;6.93e-09;32!UBERON:0001637;4.18e-08;42!UBERON:0003509;4.18e-08;42!UBERON:0004572;4.18e-08;42!UBERON:0004573;2.13e-07;33!UBERON:0004571;2.13e-07;33!UBERON:0007500;2.27e-07;56!UBERON:0001981;2.27e-07;56!UBERON:0004537;2.27e-07;56!UBERON:0002780;8.54e-07;41!UBERON:0001890;8.54e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002619;4.83e-11;22!UBERON:0001869;4.78e-10;32!UBERON:0001950;5.76e-10;20!UBERON:0001893;3.43e-09;34!UBERON:0000956;3.52e-09;25!UBERON:0000203;3.52e-09;25!UBERON:0003528;3.86e-09;34!UBERON:0002020;3.86e-09;34!UBERON:0002791;6.93e-09;32!UBERON:0001637;4.18e-08;42!UBERON:0003509;4.18e-08;42!UBERON:0004572;4.18e-08;42!UBERON:0004573;2.13e-07;33!UBERON:0004571;2.13e-07;33!UBERON:0007500;2.27e-07;56!UBERON:0001981;2.27e-07;56!UBERON:0004537;2.27e-07;56!UBERON:0002780;8.54e-07;41!UBERON:0001890;8.54e-07;41 | ||
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|short_description=p3@GPI | |short_description=p3@GPI | ||
}} | }} |
Latest revision as of 08:07, 17 September 2015
Short description: | p3@GPI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPI_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000392234, uc002nvh.1_5end |
EntrezGene: | GPI |
HGNC: | 4458 |
UniProt: | Q59F85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.41e-08 | 32 |