FFCP PHASE1:Hg19::chr10:15183694..15183716,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9397 | |EntrezGene=9397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7858 | |HGNC=7858 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-342bp_to_ENST00000478580_5end | |association_with_transcript=-342bp_to_ENST00000478580_5end | ||
|cluster_id=chr10:15183694..15183716,- | |||
|coexpression_cluster_id=C580 | |||
|description=CAGE_peak_4_at_NMT2_5end | |description=CAGE_peak_4_at_NMT2_5end | ||
|id=chr10:15183694..15183716,- | |id=chr10:15183694..15183716,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.43e-12;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.45e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002370;4.47e-45;2!UBERON:0005058;4.47e-45;2!UBERON:0009113;4.47e-45;2!UBERON:0005383;3.59e-30;3!UBERON:0005382;3.59e-30;3!UBERON:0001874;2.93e-23;1!UBERON:0000369;6.42e-23;4!UBERON:0002435;6.42e-23;4!UBERON:0000204;6.42e-23;4!UBERON:0004177;9.90e-19;5!UBERON:0005057;9.90e-19;5!UBERON:0009663;1.49e-13;7!UBERON:0001873;2.45e-12;2!UBERON:0002420;9.23e-11;9!UBERON:0000125;9.23e-11;9!UBERON:0007245;9.23e-11;9!UBERON:0002308;9.23e-11;9!UBERON:0010009;9.23e-11;9!UBERON:0010011;9.23e-11;9!UBERON:0000454;9.23e-11;9 | |||
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| ||
|short_description=p4@NMT2 | |short_description=p4@NMT2 | ||
}} | }} |
Latest revision as of 08:23, 17 September 2015
Short description: | p4@NMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NMT2_5end |
Coexpression cluster: | C580_chronic_thymus_Hodgkin_acute_iPS_vein_Burkitt |
Association with transcript: | -342bp_to_ENST00000478580_5end |
EntrezGene: | NMT2 |
HGNC: | 7858 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 3.10e-30 | 3 |
dorsal striatum | 3.10e-30 | 3 |
putamen | 2.10e-23 | 1 |
thymus | 3.68e-23 | 4 |
hemolymphoid system gland | 3.68e-23 | 4 |
thymic region | 3.68e-23 | 4 |
pharyngeal gland | 3.68e-23 | 4 |
thymus primordium | 3.68e-23 | 4 |
corpus striatum | 5.75e-23 | 4 |
striatum | 5.75e-23 | 4 |
ventral part of telencephalon | 5.75e-23 | 4 |
future corpus striatum | 5.75e-23 | 4 |
pharyngeal epithelium | 8.39e-16 | 6 |
hemopoietic organ | 1.08e-13 | 7 |
immune organ | 1.08e-13 | 7 |
telencephalic nucleus | 1.40e-13 | 7 |
caudate nucleus | 2.59e-12 | 2 |
future caudate nucleus | 2.59e-12 | 2 |
basal ganglion | 8.79e-11 | 9 |
neural nucleus | 8.79e-11 | 9 |
nuclear complex of neuraxis | 8.79e-11 | 9 |
nucleus of brain | 8.79e-11 | 9 |
aggregate regional part of brain | 8.79e-11 | 9 |
collection of basal ganglia | 8.79e-11 | 9 |
cerebral subcortex | 8.79e-11 | 9 |
neck | 7.08e-10 | 10 |
gland of gut | 7.08e-10 | 10 |
chordate pharynx | 7.08e-10 | 10 |
pharyngeal region of foregut | 7.08e-10 | 10 |
pharynx | 4.61e-09 | 11 |
entire pharyngeal arch endoderm | 4.61e-09 | 11 |
early pharyngeal endoderm | 4.61e-09 | 11 |