FFCP PHASE1:Hg19::chr10:15762227..15762257,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8516 | |EntrezGene=8516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6144 | |HGNC=6144 | ||
|TSSclassifier=strong | |||
|UniProt=P53708 | |UniProt=P53708 | ||
|association_with_transcript=-103bp_to_ENST00000378076_5end | |association_with_transcript=-103bp_to_ENST00000378076_5end | ||
|cluster_id=chr10:15762227..15762257,- | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_3_at_ITGA8_5end | |description=CAGE_peak_3_at_ITGA8_5end | ||
|id=chr10:15762227..15762257,- | |id=chr10:15762227..15762257,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000346;5.55e-11;3!CL:1000428;5.55e-11;3!CL:0000708;7.29e-11;3!CL:0002559;9.60e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.20e-11,3;CL:1000428,5.20e-11,3;CL:0000708,5.39e-11,3;CL:0002559,9.24e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.97e-09;4!UBERON:0007284;9.97e-09;4!UBERON:0006965;4.61e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.30e-37!115;UBERON:0002616!8.72e-21!59;UBERON:0000073!1.01e-20!94;UBERON:0001016!1.01e-20!94;UBERON:0000955!3.62e-20!69;UBERON:0006238!3.62e-20!69;UBERON:0001017!3.19e-19!82;UBERON:0001049!4.64e-19!57;UBERON:0005068!4.64e-19!57;UBERON:0006241!4.64e-19!57;UBERON:0007135!4.64e-19!57;UBERON:0005743!6.69e-19!86;UBERON:0000153!1.29e-17!129;UBERON:0007811!1.29e-17!129;UBERON:0000033!6.21e-17!123;UBERON:0004121!1.79e-16!169;UBERON:0000924!1.23e-15!173;UBERON:0006601!1.23e-15!173;UBERON:0003075!2.57e-15!86;UBERON:0007284!2.57e-15!86;UBERON:0002346!4.65e-14!90;UBERON:0002780!1.44e-13!41;UBERON:0001890!1.44e-13!41;UBERON:0006240!1.44e-13!41;UBERON:0003080!4.59e-13!42;UBERON:0000475!1.78e-12!365;UBERON:0002619!6.91e-12!22;UBERON:0001893!4.45e-11!34;UBERON:0002791!2.85e-10!33;UBERON:0001950!5.70e-10!20;UBERON:0000956!6.21e-10!25;UBERON:0000203!6.21e-10!25;UBERON:0001869!6.54e-10!32;UBERON:0003056!3.85e-09!61;UBERON:0002020!9.00e-09!34;UBERON:0003528!9.00e-09!34;UBERON:0000062!2.97e-08!511;UBERON:0000477!9.50e-08!286;UBERON:0004732!1.52e-07!13;UBERON:0003076!2.11e-07!15;UBERON:0003057!2.11e-07!15;UBERON:0000468!5.85e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.55e-11;3!UBERON:0001992;5.55e-11;3!UBERON:0003210;7.29e-11;3!UBERON:0002073;9.60e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.20e-11,3;UBERON:0001992,5.20e-11,3;UBERON:0003210,5.39e-11,3;UBERON:0007023,6.00e-10,114;UBERON:0010314,1.35e-08,132;UBERON:0004121,1.45e-07,171;UBERON:0000924,1.45e-07,171;UBERON:0006601,1.45e-07,171;UBERON:0002073,9.24e-07,5;UBERON:0005086,9.24e-07,5 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0780264519197,1.02000345622126,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0,0.286836620748814,0,1.12135520028461,0,0,0,0,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,3.56400857184616,1.23633464639278,0,0,0.168336113954066,0.125118519871964,0,3.07284334616587,2.14541457059314,1.65261864797256,0,0.717558542755448,0.427114777637135,0.423863802319124,0.300091096084402,0,0.257640540045629,0,0.843881661206331,0.779496041289589,0,0.368199594569197,3.55621325001386,2.13005755509969,0.705264687593482,0,0,0,0,0,0,0.348581828608555,0.414644220061482,0,0,3.12899064659632,2.57296375277154,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56983518083505,10.899001720832,1.3200891447771,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.60586089917446,0.157702415033935,0.468565659970853,0,0,0,0,0,0,0.587403472388222,1.02943027143257,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60510858551767,0.316379424718726,0,0,0,1.27281299170375,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.75894634753143,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.422008249231538,0.222617410045812,0,0.422250816255987,39.4511016737118,0,0,0,0,1.55519793830904,0,0,0,2.17015492401254,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.663475559587348,0.295547618953547,0.438770794307945,0,0,5.07871706125061,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.337005664903385,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,1.53036380815245,3.79119477770928,0.150323419414493,2.38482840213668,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,1.26085721434945,0,1.35588444468319,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,4.07992870545287,0.288950589901519,0,0,0,0,0,1.11712960508902,17.8745130729113,0,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,3.18091875923721,0.681017030557878,0,0,0,0,0,0.607495566580247,0,0.788057072991982,4.72091293214983,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,4.87333345808964,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.610131324509816,1.8778639605975,0.573409195690071,0.554645257684261,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,4.09734283307391,0,0.436838552768056,0,0,0,0,0,0,0.80057074828547,10.9329542544112,10.718591707362,0.513833800771676,1.41696576325585,0.319267718114302,0,0,0.207471757392654,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,1.35378591028663,0.20170506870352,0,0,0,0,1.01306376927592,0.781078098613847,1.03343398250592,0.760989722326882,0,0,20.3446583139611,0,0,0.535701835878287,2.01770233331294,0,0.455324382702595,0,0,0,0.0679697329768317,0.526182188502793,0,0,1.49136876415977,0,0,0,0,0,2.85906176706625,0.158013611732727,9.41555545481815,0,0,0,0,0,0,0,0.0852134047591577,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0.118920090777569,0,0,0.150962843566674,0.308696632431779,0,0,1.22574160876953,0,0.196308467114945,0,1.2679671827502,0,0.375935671919414,1.16024198352439,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,8.04634967185241,0.407948941145488,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,1.43979526614655,0.267964130156178,0,0.20686599172379,0.213233981900981,0.476128862927481,0,0.0620747142958579,0,0.12729431655633,0,0,0.684466602170562,0.471464371102113,0.932388670104793,0,0,0,0,0,0,2.93379466038879,2.03448089157869,0,1.40891655513718,0 | |phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0780264519197,1.02000345622126,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0,0.286836620748814,0,1.12135520028461,0,0,0,0,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,3.56400857184616,1.23633464639278,0,0,0.168336113954066,0.125118519871964,0,3.07284334616587,2.14541457059314,1.65261864797256,0,0.717558542755448,0.427114777637135,0.423863802319124,0.300091096084402,0,0.257640540045629,0,0.843881661206331,0.779496041289589,0,0.368199594569197,3.55621325001386,2.13005755509969,0.705264687593482,0,0,0,0,0,0,0.348581828608555,0.414644220061482,0,0,3.12899064659632,2.57296375277154,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56983518083505,10.899001720832,1.3200891447771,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.60586089917446,0.157702415033935,0.468565659970853,0,0,0,0,0,0,0.587403472388222,1.02943027143257,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60510858551767,0.316379424718726,0,0,0,1.27281299170375,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.75894634753143,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.422008249231538,0.222617410045812,0,0.422250816255987,39.4511016737118,0,0,0,0,1.55519793830904,0,0,0,2.17015492401254,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.663475559587348,0.295547618953547,0.438770794307945,0,0,5.07871706125061,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.337005664903385,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,1.53036380815245,3.79119477770928,0.150323419414493,2.38482840213668,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,1.26085721434945,0,1.35588444468319,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,4.07992870545287,0.288950589901519,0,0,0,0,0,1.11712960508902,17.8745130729113,0,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,3.18091875923721,0.681017030557878,0,0,0,0,0,0.607495566580247,0,0.788057072991982,4.72091293214983,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,4.87333345808964,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.610131324509816,1.8778639605975,0.573409195690071,0.554645257684261,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,4.09734283307391,0,0.436838552768056,0,0,0,0,0,0,0.80057074828547,10.9329542544112,10.718591707362,0.513833800771676,1.41696576325585,0.319267718114302,0,0,0.207471757392654,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,1.35378591028663,0.20170506870352,0,0,0,0,1.01306376927592,0.781078098613847,1.03343398250592,0.760989722326882,0,0,20.3446583139611,0,0,0.535701835878287,2.01770233331294,0,0.455324382702595,0,0,0,0.0679697329768317,0.526182188502793,0,0,1.49136876415977,0,0,0,0,0,2.85906176706625,0.158013611732727,9.41555545481815,0,0,0,0,0,0,0,0.0852134047591577,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0.118920090777569,0,0,0.150962843566674,0.308696632431779,0,0,1.22574160876953,0,0.196308467114945,0,1.2679671827502,0,0.375935671919414,1.16024198352439,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,8.04634967185241,0.407948941145488,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,1.43979526614655,0.267964130156178,0,0.20686599172379,0.213233981900981,0.476128862927481,0,0.0620747142958579,0,0.12729431655633,0,0,0.684466602170562,0.471464371102113,0.932388670104793,0,0,0,0,0,0,2.93379466038879,2.03448089157869,0,1.40891655513718,0 | ||
|short_description=p3@ITGA8 | |short_description=p3@ITGA8 | ||
}} | }} |
Latest revision as of 08:50, 17 September 2015
Short description: | p3@ITGA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGA8_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | -103bp_to_ENST00000378076_5end |
EntrezGene: | ITGA8 |
HGNC: | 6144 |
UniProt: | P53708 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.20e-11 | 3 |
stem cell of epidermis | 5.20e-11 | 3 |
leptomeningeal cell | 5.39e-11 | 3 |
hair follicle cell | 9.24e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 5.20e-11 | 3 |
papillary layer of dermis | 5.20e-11 | 3 |
blood-cerebrospinal fluid barrier | 5.39e-11 | 3 |
adult organism | 6.00e-10 | 114 |
structure with developmental contribution from neural crest | 1.35e-08 | 132 |
ectoderm-derived structure | 1.45e-07 | 171 |
ectoderm | 1.45e-07 | 171 |
presumptive ectoderm | 1.45e-07 | 171 |
hair follicle | 9.24e-07 | 5 |
hair follicle placode | 9.24e-07 | 5 |