FFCP PHASE1:Hg19::chr10:15762274..15762283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8516 | |EntrezGene=8516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6144 | |HGNC=6144 | ||
|TSSclassifier=strong | |||
|UniProt=P53708 | |UniProt=P53708 | ||
|association_with_transcript=-150bp_to_ENST00000378076_5end | |association_with_transcript=-150bp_to_ENST00000378076_5end | ||
|cluster_id=chr10:15762274..15762283,- | |||
|coexpression_cluster_id=C230 | |coexpression_cluster_id=C230 | ||
|description=CAGE_peak_12_at_ITGA8_5end | |description=CAGE_peak_12_at_ITGA8_5end | ||
|id=chr10:15762274..15762283,- | |id=chr10:15762274..15762283,- | ||
|ontology_enrichment_celltype=CL:0000708;1.83e-14;3!CL:0002563;3.42e-11;4 | |ontology_enrichment_celltype=CL:0000708!5.57e-11!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000708;1.83e-14;3!CL:0002563;3.42e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000708,2.09e-14,3;CL:0002563,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.21e-40;1!UBERON:0006965;3.11e-21;2!UBERON:0005062;2.80e-11;4!UBERON:0007284;2.80e-11;4!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002146;9.91e-41;1!UBERON:0005623;9.91e-41;1!UBERON:0000989;2.21e-40;1!UBERON:0008811;2.21e-40;1!UBERON:0003978;1.40e-14;3!UBERON:0000946;1.40e-14;3!UBERON:0003210;1.83e-14;3!UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.86e-16!115;UBERON:0003210!5.57e-11!3;UBERON:0000200!1.19e-08!6;UBERON:0001950!1.29e-08!20;UBERON:0001049!4.35e-08!57;UBERON:0005068!4.35e-08!57;UBERON:0006241!4.35e-08!57;UBERON:0007135!4.35e-08!57;UBERON:0002619!9.28e-08!22;UBERON:0002616!1.01e-07!59;UBERON:0000955!3.76e-07!69;UBERON:0006238!3.76e-07!69;UBERON:0003075!4.21e-07!86;UBERON:0007284!4.21e-07!86;UBERON:0003080!4.45e-07!42;UBERON:0005743!6.11e-07!86;UBERON:0001871!7.41e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;9.91e-41;1!UBERON:0005623;9.91e-41;1!UBERON:0000989;2.21e-40;1!UBERON:0008811;2.21e-40;1!UBERON:0003978;1.40e-14;3!UBERON:0000946;1.40e-14;3!UBERON:0003210;1.83e-14;3!UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,9.91e-41,1;UBERON:0005623,9.91e-41,1;UBERON:0000989,1.48e-40,1;UBERON:0008811,1.48e-40,1;UBERON:0006258,1.48e-40,1;UBERON:0005876,1.48e-40,1;UBERON:0004874,1.48e-40,1;UBERON:0003978,1.40e-14,3;UBERON:0009751,1.40e-14,3;UBERON:0000946,1.40e-14,3;UBERON:0002523,1.40e-14,3;UBERON:0005983,1.40e-14,3;UBERON:0002165,1.40e-14,3;UBERON:0002062,1.40e-14,3;UBERON:0007280,1.40e-14,3;UBERON:0003210,2.09e-14,3;UBERON:0001242,3.42e-11,4;UBERON:0001262,3.42e-11,4;UBERON:0004786,3.42e-11,4;UBERON:0004808,3.42e-11,4;UBERON:0001277,3.42e-11,4;UBERON:0004797,5.38e-07,7 | |||
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| ||
|short_description=p12@ITGA8 | |short_description=p12@ITGA8 | ||
}} | }} |
Latest revision as of 08:51, 17 September 2015
Short description: | p12@ITGA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ITGA8_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | -150bp_to_ENST00000378076_5end |
EntrezGene: | ITGA8 |
HGNC: | 6144 |
UniProt: | P53708 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 2.09e-14 | 3 |
intestinal epithelial cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 9.91e-41 | 1 |
semi-lunar valve | 9.91e-41 | 1 |
penis | 1.48e-40 | 1 |
intromittent organ | 1.48e-40 | 1 |
lateral plate mesenchyme | 1.48e-40 | 1 |
undifferentiated genital tubercle | 1.48e-40 | 1 |
somatopleure | 1.48e-40 | 1 |
valve | 1.40e-14 | 3 |
cardiac mesenchyme | 1.40e-14 | 3 |
cardial valve | 1.40e-14 | 3 |
tunica intima | 1.40e-14 | 3 |
heart layer | 1.40e-14 | 3 |
endocardium | 1.40e-14 | 3 |
endocardial cushion | 1.40e-14 | 3 |
presumptive endocardium | 1.40e-14 | 3 |
blood-cerebrospinal fluid barrier | 2.09e-14 | 3 |
intestinal mucosa | 3.42e-11 | 4 |
wall of intestine | 3.42e-11 | 4 |
gastrointestinal system mucosa | 3.42e-11 | 4 |
gastrointestinal system epithelium | 3.42e-11 | 4 |
intestinal epithelium | 3.42e-11 | 4 |
blood vessel layer | 5.38e-07 | 7 |