FFCP PHASE1:Hg19::chr19:35521699..35521714,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6324 | |EntrezGene=6324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10586 | |HGNC=10586 | ||
|TSSclassifier=strong | |||
|UniProt=Q07699 | |UniProt=Q07699 | ||
|association_with_transcript=107bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | |association_with_transcript=107bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | ||
|cluster_id=chr19:35521699..35521714,+ | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_4_at_SCN1B_5end | |description=CAGE_peak_4_at_SCN1B_5end | ||
|id=chr19:35521699..35521714,+ | |id=chr19:35521699..35521714,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.38e-10;82!UBERON:0006215;3.54e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;9.90e-18;22!UBERON:0001950;5.32e-17;20!UBERON:0000956;2.78e-15;25!UBERON:0000203;2.78e-15;25!UBERON:0001893;7.51e-13;34!UBERON:0001869;2.62e-12;32!UBERON:0002791;8.13e-12;32!UBERON:0007023;9.82e-12;114!UBERON:0004732;1.10e-11;13!UBERON:0003528;1.72e-11;34!UBERON:0002020;1.72e-11;34!UBERON:0000073;1.14e-10;53!UBERON:0002616;1.14e-10;53!UBERON:0002780;3.52e-10;41!UBERON:0001890;3.52e-10;41!UBERON:0004733;5.25e-10;12!UBERON:0002028;5.25e-10;12!UBERON:0001017;3.81e-09;75!UBERON:0002021;1.20e-08;5!UBERON:0007100;1.84e-08;25!UBERON:0001872;1.96e-08;5!UBERON:0000955;2.42e-08;68!UBERON:0001016;4.67e-08;83!UBERON:0002680;1.80e-07;9!UBERON:0001895;1.80e-07;9!UBERON:0002298;5.08e-07;6!UBERON:0005090;6.43e-07;2!UBERON:0001630;6.43e-07;2!UBERON:0000200;1.00e-06;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.73e-42,114;UBERON:0001049,1.08e-24,56;UBERON:0005068,1.08e-24,56;UBERON:0006241,1.08e-24,56;UBERON:0007135,1.08e-24,56;UBERON:0000073,2.82e-22,53;UBERON:0002616,2.82e-22,53;UBERON:0010314,9.04e-21,132;UBERON:0001017,2.07e-20,81;UBERON:0003075,5.47e-19,82;UBERON:0007284,5.47e-19,82;UBERON:0001016,5.86e-19,89;UBERON:0000955,8.07e-19,68;UBERON:0006238,8.07e-19,68;UBERON:0002346,9.68e-18,86;UBERON:0002619,1.38e-17,22;UBERON:0001950,8.58e-17,20;UBERON:0010371,1.23e-15,104;UBERON:0000956,3.69e-15,25;UBERON:0000203,3.69e-15,25;UBERON:0002780,2.25e-14,41;UBERON:0001890,2.25e-14,41;UBERON:0003080,2.25e-14,41;UBERON:0006240,2.25e-14,41;UBERON:0001893,6.96e-14,34;UBERON:0003528,7.03e-14,34;UBERON:0002020,7.03e-14,34;UBERON:0004121,2.79e-13,171;UBERON:0000924,2.79e-13,171;UBERON:0006601,2.79e-13,171;UBERON:0001869,3.90e-13,32;UBERON:0002791,6.50e-13,32;UBERON:0003076,1.79e-12,15;UBERON:0003057,1.79e-12,15;UBERON:0004732,1.37e-11,13;UBERON:0000025,2.70e-10,192;UBERON:0004733,6.34e-10,12;UBERON:0002028,6.34e-10,12;UBERON:0007277,6.34e-10,12;UBERON:0004111,1.38e-09,240;UBERON:0003056,2.08e-09,61;UBERON:0002021,1.18e-08,5;UBERON:0011216,1.42e-08,223;UBERON:0000483,2.09e-08,306;UBERON:0001872,2.56e-08,5;UBERON:0000119,3.27e-08,309;UBERON:0007100,8.88e-08,27;UBERON:0002680,1.67e-07,9;UBERON:0001895,1.67e-07,9;UBERON:0010092,1.67e-07,9;UBERON:0003103,5.41e-07,68;UBERON:0002298,6.33e-07,6;UBERON:0005090,6.45e-07,2;UBERON:0001630,6.45e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.639312809217652,0,0,0.144846518960824,1.5905718941022,2.91980922181582,0,0,0,0.589405839739707,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.503760491138201,0.169560592310488,0,0,0,0,0.132529768321485,0.232387885739037,0,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0.594524649154913,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0.791951872933429,3.91871190177462,0,1.09970290300263,0,0,0,0,0,0,0.434343920002738,0.821905290201534,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0.117141414992713,0,2.27407504055985,0,0,0,0.0868836144680828,0.391602314925481,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0.519254429183621,0,0,0,0,0.229628896329213,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0,0.0915694648183434,0,0,0,1.6068392984416,0.676695028044854,0.154048617114644,0.614014698904518,0,0,0,0.0852266274161009,1.15741646340759,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0.571890581771475,0.511795582622668,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,1.26377536871694,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.796991953004279,0.276283915531148,0.251932747854276,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,3.87733098438087,1.85536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0.482385754501632,7.62908681585416,3.75969483766164,15.0729285666309,1.31631238292384,0,0,0.153900517007594,6.49469718327907,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,18.4592858878721,3.27970224015475,0,0,0,0,1.20990716048664,0,1.45329133145522,0,0,0,0,0,0,0,0,0.173559738335131,0,0,6.81434006143918,0,0,0,0.0821154570532092,2.13375836274523,0,5.19755703795225,0,0,1.13959432720582,0,0,0.213452994739353,0.999048047910651,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.821432273351958,0,0,0,5.02708322290058,2.52076466412852,0,1.99679000498991,8.58452096273142,4.01708623395371,0.0671834724867263,1.08089965062721,0,0,0.0824158583811665,0.13480708770837,0.0984274815147488,0,1.59045937961861,0,0,0.137539436597234,0,0,0,0.850493793212345,0,0.157611414598396,0,0,0,0.191915197319445,6.4322579373603,7.28301167401975,0,0,0,0.653174720218818,0,0.082092520749339,0,0.226624183040251,0,0,2.71494208359256,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.58634144372552,1.001527445652,0.573409195690071,1.10929051536852,2.04918129706565,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,1.62640664988597,0,0,0.621051827505038,0,0,0,0.450772826991655,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0.428883182749851,0,0,0.231522474323834,0.244736704506468,0,0.308801447160972,0.438568099157414,0,0,0.168942440653073,0,0.690860683462397,0,0.967809053062115,1.16916185303633,1.32864840313363,0.327130788511688,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0,0,0.513833800771676,5.6678630530234,1.43670473151436,2.46139637088906,0,5.39426569220899,0.968853873791107,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0.163771917510097,0,2.83657855397258,4.68646859168308,1.03343398250592,2.34638497717455,0,0.548257766857182,20.8408694923504,0,0,2.67850917939143,0.336283722218824,0,0,0,0,0,4.2820931775404,2.4993653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| ||
|short_description=p4@SCN1B | |short_description=p4@SCN1B | ||
}} | }} |
Latest revision as of 09:31, 17 September 2015
Short description: | p4@SCN1B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCN1B_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 107bp_to_ENST00000262631, ENST00000415950, NM_001037, NM_199037_5end |
EntrezGene: | SCN1B |
HGNC: | 10586 |
UniProt: | Q07699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data