FFCP PHASE1:Hg19::chr17:7307407..7307424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57048,254863 | |EntrezGene=57048,254863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16495,28618 | |HGNC=16495,28618 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000535512,uc002ggr.1,uc002ggs.2,uc010cmg.1_5end | |association_with_transcript=0bp_to_ENST00000535512,uc002ggr.1,uc002ggs.2,uc010cmg.1_5end | ||
|cluster_id=chr17:7307407..7307424,- | |||
|coexpression_cluster_id=C2143 | |coexpression_cluster_id=C2143 | ||
|description=CAGE_peak_1_at_C17orf61_5end,CAGE_peak_1_at_PLSCR3_5end | |description=CAGE_peak_1_at_C17orf61_5end,CAGE_peak_1_at_PLSCR3_5end | ||
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|ontology_enrichment_celltype=CL:0000183!7.46e-14!59;CL:0000222!1.77e-13!119;CL:0002321!3.58e-12!248;CL:0000220!5.86e-12!246;CL:0000393!6.76e-12!60;CL:0000211!6.76e-12!60;CL:0000187!2.35e-11!54;CL:0000680!1.19e-10!57;CL:0000056!1.19e-10!57;CL:0000355!1.19e-10!57;CL:0000066!2.93e-09!254;CL:1000449!4.95e-09!16;CL:0000192!8.83e-09!42;CL:0000514!8.83e-09!42;CL:1000497!1.10e-07!18;CL:0002518!1.10e-07!18;CL:0002681!1.24e-07!13;CL:0002584!1.24e-07!13;CL:1000507!5.81e-07!12;CL:1000494!5.81e-07!12 | |ontology_enrichment_celltype=CL:0000183!7.46e-14!59;CL:0000222!1.77e-13!119;CL:0002321!3.58e-12!248;CL:0000220!5.86e-12!246;CL:0000393!6.76e-12!60;CL:0000211!6.76e-12!60;CL:0000187!2.35e-11!54;CL:0000680!1.19e-10!57;CL:0000056!1.19e-10!57;CL:0000355!1.19e-10!57;CL:0000066!2.93e-09!254;CL:1000449!4.95e-09!16;CL:0000192!8.83e-09!42;CL:0000514!8.83e-09!42;CL:1000497!1.10e-07!18;CL:0002518!1.10e-07!18;CL:0002681!1.24e-07!13;CL:0002584!1.24e-07!13;CL:1000507!5.81e-07!12;CL:1000494!5.81e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000449;4.58e-09;15!CL:0002681;1.13e-07;12!CL:0002584;1.13e-07;12!CL:1000497;1.18e-07;17!CL:0002518;1.18e-07;17!CL:0000187;1.66e-07;55 | |ontology_enrichment_celltype_v019=CL:1000449;4.58e-09;15!CL:0002681;1.13e-07;12!CL:0002584;1.13e-07;12!CL:1000497;1.18e-07;17!CL:0002518;1.18e-07;17!CL:0000187;1.66e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.28e-14,121;CL:0002321,1.29e-12,250;CL:0000393,5.28e-12,61;CL:0000211,5.28e-12,61;CL:0000187,1.85e-11,55;CL:0000680,9.29e-11,58;CL:0000056,9.29e-11,58;CL:0000355,9.29e-11,58;CL:0000066,3.77e-09,253;CL:1000449,4.58e-09,15;CL:0000192,6.99e-09,43;CL:0000514,6.99e-09,43;CL:0002681,1.14e-07,12;CL:0002584,1.14e-07,12;CL:1000497,1.19e-07,17;CL:0002518,1.19e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006555;4.58e-09;15!UBERON:0004819;4.58e-09;15!UBERON:0001285;4.58e-09;15!UBERON:0007684;4.58e-09;15!UBERON:0000353;9.48e-08;15!UBERON:0001225;1.13e-07;12!UBERON:0008987;1.13e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0006555;4.58e-09;15!UBERON:0004819;4.58e-09;15!UBERON:0001285;4.58e-09;15!UBERON:0007684;4.58e-09;15!UBERON:0000353;9.48e-08;15!UBERON:0001225;1.13e-07;12!UBERON:0008987;1.13e-07;12 | ||
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| ||
|short_description=p1@C17orf61,p1@PLSCR3 | |short_description=p1@C17orf61,p1@PLSCR3 | ||
}} | }} |
Latest revision as of 09:42, 17 September 2015
Short description: | p1@C17orf61, p1@PLSCR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C17orf61_5end, CAGE_peak_1_at_PLSCR3_5end |
Coexpression cluster: | C2143_Mesenchymal_Alveolar_Osteoblast_Renal_Adipocyte_Placental_Fibroblast |
Association with transcript: | 0bp_to_ENST00000535512, uc002ggr.1, uc002ggs.2, uc010cmg.1_5end |
EntrezGene: | 57048,254863 |
HGNC: | 28618&submit=Submit 16495, 28618 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.28e-14 | 121 |
embryonic cell | 1.29e-12 | 250 |
electrically responsive cell | 5.28e-12 | 61 |
electrically active cell | 5.28e-12 | 61 |
muscle cell | 1.85e-11 | 55 |
muscle precursor cell | 9.29e-11 | 58 |
myoblast | 9.29e-11 | 58 |
multi-potent skeletal muscle stem cell | 9.29e-11 | 58 |
epithelial cell | 3.77e-09 | 253 |
epithelial cell of nephron | 4.58e-09 | 15 |
smooth muscle cell | 6.99e-09 | 43 |
smooth muscle myoblast | 6.99e-09 | 43 |
kidney cortical cell | 1.14e-07 | 12 |
renal cortical epithelial cell | 1.14e-07 | 12 |
kidney cell | 1.19e-07 | 17 |
kidney epithelial cell | 1.19e-07 | 17 |