FFCP PHASE1:Hg19::chr10:17242512..17242523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1787 | |EntrezGene=1787 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2977 | |HGNC=2977 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000451253_5end | |association_with_transcript=42bp_to_ENST00000451253_5end | ||
|cluster_id=chr10:17242512..17242523,- | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_9_at_TRDMT1_5end | |description=CAGE_peak_9_at_TRDMT1_5end | ||
|id=chr10:17242512..17242523,- | |id=chr10:17242512..17242523,- | ||
|ontology_enrichment_celltype=CL:0000738!1.36e-23!140;CL:0000037!5.39e-20!172;CL:0000566!5.39e-20!172;CL:0000988!2.34e-18!182;CL:0000766!2.66e-18!76;CL:0002031!5.89e-18!124;CL:0002032!2.89e-17!165;CL:0000837!2.89e-17!165;CL:0002393!6.03e-17!9;CL:0002397!6.03e-17!9;CL:0000134!9.52e-17!358;CL:0002320!3.50e-16!365;CL:0000557!3.54e-16!71;CL:0000839!1.02e-14!70;CL:0000034!2.57e-14!444;CL:0000219!3.43e-14!390;CL:0000763!3.93e-14!112;CL:0000049!3.93e-14!112;CL:0002087!1.75e-13!119;CL:0000048!1.44e-12!430;CL:0000723!3.23e-12!436;CL:0002057!7.43e-12!42;CL:0000767!1.30e-11!3;CL:0002009!2.19e-11!65;CL:0002274!5.36e-11!5;CL:0000457!5.36e-11!5;CL:0002191!5.36e-11!5;CL:0000097!5.36e-11!5;CL:0000831!5.36e-11!5;CL:0002028!5.36e-11!5;CL:0000860!7.55e-11!45;CL:0000875!2.19e-10!3;CL:0002396!2.19e-10!3;CL:0002194!2.42e-10!63;CL:0000576!2.42e-10!63;CL:0000040!2.42e-10!63;CL:0000559!2.42e-10!63 | |ontology_enrichment_celltype=CL:0000738!1.36e-23!140;CL:0000037!5.39e-20!172;CL:0000566!5.39e-20!172;CL:0000988!2.34e-18!182;CL:0000766!2.66e-18!76;CL:0002031!5.89e-18!124;CL:0002032!2.89e-17!165;CL:0000837!2.89e-17!165;CL:0002393!6.03e-17!9;CL:0002397!6.03e-17!9;CL:0000134!9.52e-17!358;CL:0002320!3.50e-16!365;CL:0000557!3.54e-16!71;CL:0000839!1.02e-14!70;CL:0000034!2.57e-14!444;CL:0000219!3.43e-14!390;CL:0000763!3.93e-14!112;CL:0000049!3.93e-14!112;CL:0002087!1.75e-13!119;CL:0000048!1.44e-12!430;CL:0000723!3.23e-12!436;CL:0002057!7.43e-12!42;CL:0000767!1.30e-11!3;CL:0002009!2.19e-11!65;CL:0002274!5.36e-11!5;CL:0000457!5.36e-11!5;CL:0002191!5.36e-11!5;CL:0000097!5.36e-11!5;CL:0000831!5.36e-11!5;CL:0002028!5.36e-11!5;CL:0000860!7.55e-11!45;CL:0000875!2.19e-10!3;CL:0002396!2.19e-10!3;CL:0002194!2.42e-10!63;CL:0000576!2.42e-10!63;CL:0000040!2.42e-10!63;CL:0000559!2.42e-10!63 | ||
|ontology_enrichment_celltype_v019=CL:0000767;6.93e-44;3!CL:0000097;8.15e-26;5!CL:0000094;6.31e-17;8!CL:0000037;9.98e-16;1!CL:0001024;9.98e-16;1!CL:0000163;1.18e-14;9!CL:0000081;1.75e-12;11!CL:0001014;1.61e-08;2!CL:0001016;1.61e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,6.00e-44,3;CL:0000097,6.05e-26,5;CL:0002028,6.05e-26,5;CL:0000094,5.98e-17,8;CL:0001024,1.16e-15,1;CL:0000163,9.99e-15,9;CL:0000081,1.69e-12,11;CL:0000766,9.15e-12,72;CL:0000763,1.09e-09,108;CL:0000049,1.09e-09,108;CL:0001014,1.61e-08,2;CL:0001016,1.61e-08,2;CL:0000738,1.63e-07,136;CL:0000037,2.30e-07,168;CL:0000557,3.40e-07,67;CL:0000988,6.21e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.06e-15!375;UBERON:0002371!2.34e-15!80;UBERON:0001474!2.92e-15!86;UBERON:0004765!3.97e-12!101;UBERON:0001434!3.97e-12!101;UBERON:0002390!4.67e-12!102;UBERON:0003061!4.67e-12!102;UBERON:0002193!1.81e-10!112;UBERON:0002405!5.18e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.71e-08,76;UBERON:0001474,7.72e-08,82;UBERON:0004765,4.23e-07,90;UBERON:0002405,7.43e-07,93 | |||
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| ||
|short_description=p9@TRDMT1 | |short_description=p9@TRDMT1 | ||
}} | }} |
Latest revision as of 09:57, 17 September 2015
Short description: | p9@TRDMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TRDMT1_5end |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | 42bp_to_ENST00000451253_5end |
EntrezGene: | TRDMT1 |
HGNC: | 2977 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 6.00e-44 | 3 |
mast cell | 6.05e-26 | 5 |
basophil mast progenitor cell | 6.05e-26 | 5 |
granulocyte | 5.98e-17 | 8 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.16e-15 | 1 |
endocrine cell | 9.99e-15 | 9 |
blood cell | 1.69e-12 | 11 |
myeloid leukocyte | 9.15e-12 | 72 |
myeloid cell | 1.09e-09 | 108 |
common myeloid progenitor | 1.09e-09 | 108 |
CD1a-positive Langerhans cell | 1.61e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.61e-08 | 2 |
leukocyte | 1.63e-07 | 136 |
hematopoietic stem cell | 2.30e-07 | 168 |
granulocyte monocyte progenitor cell | 3.40e-07 | 67 |
hematopoietic cell | 6.21e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.71e-08 | 76 |
bone element | 7.72e-08 | 82 |
skeletal element | 4.23e-07 | 90 |
immune system | 7.43e-07 | 93 |