FFCP PHASE2:Hg19::chr19:35625819..35625839,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:163175 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18712 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=163175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18712 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8N135,A8MVC2 | ||
|association_with_transcript=264bp_to_ENST00000310123,ENST00000392225_5end | |association_with_transcript=264bp_to_ENST00000310123,ENST00000392225_5end | ||
|cluster_id=chr19:35625819..35625839,- | |cluster_id=chr19:35625819..35625839,- |
Latest revision as of 10:00, 17 September 2015
Short description: | p4@LGI4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LGI4_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 264bp_to_ENST00000310123, ENST00000392225_5end |
EntrezGene: | LGI4 |
HGNC: | 18712 |
UniProt: | Q8N135A8MVC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@LGI4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tube | 4.35e-92 | 56 |
neural rod | 4.35e-92 | 56 |
future spinal cord | 4.35e-92 | 56 |
neural keel | 4.35e-92 | 56 |
regional part of nervous system | 8.43e-88 | 53 |
regional part of brain | 8.43e-88 | 53 |
brain grey matter | 1.51e-78 | 34 |
gray matter | 1.51e-78 | 34 |
telencephalon | 2.45e-78 | 34 |
regional part of forebrain | 4.74e-78 | 41 |
Showing 1 to 10 of 94 entries