FFCP PHASE1:Hg19::chr8:21988570..21988581,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55806 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5172 | |||
|TSSclassifier=strong | |||
|UniProt=O43593 | |||
|association_with_transcript=-5bp_to_ENST00000312841,NM_005144,NM_018411,uc003xas.2,uc003xat.2,uc010lts.2_5end | |||
|cluster_id=chr8:21988570..21988581,- | |||
|description=CAGE_peak_4_at_HR_5end | |||
|id=chr8:21988570..21988581,- | |||
|ontology_enrichment_celltype=CL:0002076!9.93e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.91e-12;82 | |||
|ontology_enrichment_disease=DOID:0050687!6.80e-08!143;DOID:305!4.17e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!8.04e-28!173;UBERON:0006601!8.04e-28!173;UBERON:0007023!5.21e-27!115;UBERON:0000073!6.35e-26!94;UBERON:0001016!6.35e-26!94;UBERON:0004121!8.80e-26!169;UBERON:0005743!2.99e-24!86;UBERON:0001049!2.68e-23!57;UBERON:0005068!2.68e-23!57;UBERON:0006241!2.68e-23!57;UBERON:0007135!2.68e-23!57;UBERON:0001017!3.77e-22!82;UBERON:0000955!7.83e-22!69;UBERON:0006238!7.83e-22!69;UBERON:0002346!1.53e-21!90;UBERON:0000033!1.46e-20!123;UBERON:0000153!2.29e-20!129;UBERON:0007811!2.29e-20!129;UBERON:0003080!5.36e-20!42;UBERON:0003075!1.88e-19!86;UBERON:0007284!1.88e-19!86;UBERON:0002780!2.15e-19!41;UBERON:0001890!2.15e-19!41;UBERON:0006240!2.15e-19!41;UBERON:0002616!2.18e-19!59;UBERON:0001893!3.21e-17!34;UBERON:0002020!5.41e-17!34;UBERON:0003528!5.41e-17!34;UBERON:0002791!2.17e-16!33;UBERON:0003056!4.05e-16!61;UBERON:0001869!1.62e-15!32;UBERON:0002619!3.58e-13!22;UBERON:0001950!1.71e-11!20;UBERON:0000062!2.61e-11!511;UBERON:0000956!8.55e-11!25;UBERON:0000203!8.55e-11!25;UBERON:0000064!1.53e-10!219;UBERON:0000475!2.86e-09!365;UBERON:0002308!4.01e-08!9;UBERON:0000125!4.01e-08!9;UBERON:0002420!6.43e-08!9;UBERON:0007245!6.43e-08!9;UBERON:0010009!6.43e-08!9;UBERON:0010011!6.43e-08!9;UBERON:0000454!6.43e-08!9;UBERON:0001004!6.76e-08!72;UBERON:0000468!5.33e-07!659;UBERON:0001737!6.73e-07!9;UBERON:0001007!8.45e-07!155;UBERON:0001555!8.45e-07!155;UBERON:0007026!8.45e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.25e-28;34!UBERON:0002780;2.49e-26;41!UBERON:0001890;2.49e-26;41!UBERON:0003528;9.93e-26;34!UBERON:0002020;9.93e-26;34!UBERON:0001869;2.70e-25;32!UBERON:0002619;7.43e-25;22!UBERON:0002791;1.57e-24;32!UBERON:0000073;4.39e-22;53!UBERON:0002616;4.39e-22;53!UBERON:0000956;1.93e-21;25!UBERON:0000203;1.93e-21;25!UBERON:0001950;3.35e-21;20!UBERON:0000955;5.26e-14;68!UBERON:0001017;1.43e-12;75!UBERON:0000125;1.55e-11;9!UBERON:0002308;1.55e-11;9!UBERON:0001016;1.98e-11;83!UBERON:0000200;7.36e-10;6!UBERON:0007023;2.50e-09;114!UBERON:0002420;1.21e-08;9!UBERON:0007245;1.21e-08;9!UBERON:0010009;1.21e-08;9!UBERON:0010011;1.21e-08;9!UBERON:0000454;1.21e-08;9!UBERON:0009663;3.93e-08;7!UBERON:0002021;6.86e-08;5!UBERON:0001872;8.68e-08;5!UBERON:0000349;2.11e-07;5!UBERON:0004732;3.12e-07;13!UBERON:0011216;3.73e-07;132!UBERON:0000988;4.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.52e-40,56;UBERON:0005068,2.52e-40,56;UBERON:0006241,2.52e-40,56;UBERON:0007135,2.52e-40,56;UBERON:0000073,2.52e-40,53;UBERON:0002616,2.52e-40,53;UBERON:0002780,1.93e-36,41;UBERON:0001890,1.93e-36,41;UBERON:0003080,1.93e-36,41;UBERON:0006240,1.93e-36,41;UBERON:0010371,1.11e-33,104;UBERON:0002346,4.32e-33,86;UBERON:0000955,4.39e-33,68;UBERON:0006238,4.39e-33,68;UBERON:0001893,2.99e-32,34;UBERON:0003528,9.18e-32,34;UBERON:0002020,9.18e-32,34;UBERON:0003075,3.98e-31,82;UBERON:0007284,3.98e-31,82;UBERON:0001017,8.45e-30,81;UBERON:0001016,2.46e-29,89;UBERON:0003056,2.85e-29,61;UBERON:0001869,1.85e-28,32;UBERON:0002791,2.17e-28,32;UBERON:0007023,1.28e-25,114;UBERON:0004121,1.32e-25,171;UBERON:0000924,1.32e-25,171;UBERON:0006601,1.32e-25,171;UBERON:0002619,3.17e-25,22;UBERON:0000956,9.17e-22,25;UBERON:0000203,9.17e-22,25;UBERON:0001950,1.95e-21,20;UBERON:0011216,3.41e-20,223;UBERON:0010314,8.49e-19,132;UBERON:0000125,1.43e-11,9;UBERON:0002308,1.43e-11,9;UBERON:0000200,1.26e-09,6;UBERON:0002420,1.63e-08,9;UBERON:0007245,1.63e-08,9;UBERON:0010009,1.63e-08,9;UBERON:0010011,1.63e-08,9;UBERON:0000454,1.63e-08,9;UBERON:0009663,4.04e-08,7;UBERON:0002021,4.99e-08,5;UBERON:0001872,5.28e-08,5;UBERON:0000025,6.77e-08,192;UBERON:0000349,2.54e-07,5;UBERON:0004732,3.78e-07,13;UBERON:0000988,4.23e-07,3;UBERON:0004111,4.83e-07,240 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0,0.654895377488563,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0.622422070799533,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.309157587715317,0,0,0.337552664482532,0.389748020644795,0.252433774244115,0,0.323292113637624,0,0,0,1.54608682530637,0.545492241181669,0.860413786167011,0,0.132529768321485,0,0,0,0,0,0,0,0.928735856063958,0,1.18306800039844,0.842923450390509,1.44606617930089,0.441175890929576,1.52515610864684,1.42362371466658,0.674156540800822,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,1.53650399572076,1.1240175325762,1.40740561376283,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,1.79117045405697,0.871901815541886,4.60059214998253,0,0,0,0,0.12624243342638,0.190493682876507,0.763976851116555,0,1.71072446022705,0.719792448923265,0.300343057843917,1.14330573052231,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.821905290201534,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.601519410909855,1.19705285616665,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0.656029291399411,0.650756789328606,0,0.183138929636687,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.960950336825531,0.765676274967505,0.50578890427775,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.956557636372934,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0.293016358543788,0.242721043499027,0,0,0,0,0,0.994147647766298,1.1253553312841,0,0,2.32237948940793,0.19924798825107,0.552567831062295,0,0.511343412510774,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,5.81599647657131,1.48428957058962,0,0.7812832832557,0.174919999992391,0.724999575434793,1.4793148277115,0,0,1.03423011972439,0.291604613383254,0,2.65722415744152,0.723578631752448,1.52581736317083,0.774054819518572,1.18219047581419,1.09692698576986,0.544692317594951,2.37020365273626,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,4.97630965539252,0.442287822516696,0.611030144933625,0,0,0,4.04406797884062,0,2.81117334870407,0,0.391329237864179,0,0,0,0,0.126373159256976,0,0,1.99396161812156,0.330991955875499,0,0,0,0,0,0.489961987071888,0.261177619741208,0,0,2.03188295707079,4.01991243974021,1.97077096927702,0.0969890164884194,0,0.451961481561065,0,0,1.64608069485285,0.391102765469606,0.0801588202515337,0.640358984218058,1.59847687665704,0,0,0,0,0,2.35694034616795,0.407712618220842,0.104602846312333,0.713987523454252,0,1.20084057741958,3.01191833562385,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.201550417460179,0,0,0,0.0824158583811665,0.26961417541674,1.57483970423598,0,2.38568906942791,1.63444087333891,0,0,0,0,2.32140586367385,1.64023802976667,3.01891218839339,0,0,0,9.50222898464077,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,1.55139547633861,1.45455861916959,0.342173675768659,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,1.46431517882356,1.251909307065,0,1.44207766997908,0.993542447062135,0,0.874862855734746,0.151649117541648,6.56570267153425,0.235265819698172,0,0.434763085832475,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.521988583930423,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0.303859956177382,2.07387654227596,0,0.132864840313363,0,0.327609848846413,4.66968526632067,0.211312123358627,0,0,0,0,0,1.95831310807222,2.48830904013189,0.639471856518258,5.06776613564405,0,0.109209638192014,0.169732529954025,0.212574920101683,2.97445834221605,0.558644917973244,0.318004350653419,0.157723490002507,0,0,0,1.34881372702565,1.41696576325585,1.91560630868582,3.69209455633359,0,3.31954811828246,2.09918339321406,1.42769420259154,0.294443155503077,0,0.366857197043358,2.31051332300676,0,0,0,0,0,0,0,0,0,2.02612753855184,1.56215619722769,2.27355476151302,1.9024743058172,0,0,0.496211178389294,1.93458368795583,0.255524855279191,1.07140367175657,0.336283722218824,0,0,0,0,0.342976018874837,1.42736439251347,3.15709313101676,0,0.333694205676207,0.078493092850514,0.1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| |||
|short_description=p4@HR | |||
}} |
Latest revision as of 10:08, 17 September 2015
Short description: | p4@HR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HR_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000312841, NM_005144, NM_018411, uc003xas.2, uc003xat.2, uc010lts.2_5end |
EntrezGene: | HR |
HGNC: | 5172 |
UniProt: | O43593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data