FFCP PHASE1:Hg19::chr20:61273815..61273833,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28231 | |EntrezGene=28231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10953 | |HGNC=10953 | ||
|TSSclassifier=strong | |||
|UniProt=C9JL32 | |UniProt=C9JL32 | ||
|association_with_transcript=-5bp_to_ENST00000370512_5end | |association_with_transcript=-5bp_to_ENST00000370512_5end | ||
|cluster_id=chr20:61273815..61273833,+ | |||
|description=CAGE_peak_2_at_SLCO4A1_5end | |description=CAGE_peak_2_at_SLCO4A1_5end | ||
|id=chr20:61273815..61273833,+ | |id=chr20:61273815..61273833,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.84e-12!254;CL:1000497!9.78e-07!18;CL:0002518!9.78e-07!18 | |ontology_enrichment_celltype=CL:0000066!5.84e-12!254;CL:1000497!9.78e-07!18;CL:0002518!9.78e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.04e-08;17!CL:0002518;1.04e-08;17!CL:1000507;5.40e-08;10!CL:1000494;5.40e-08;10!CL:1000449;1.01e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.04e-15,253;CL:1000497,1.23e-08,17;CL:0002518,1.23e-08,17;CL:1000507,7.68e-08,10;CL:1000494,7.68e-08,10;CL:1000449,1.28e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.93e-08;29 | |||
|ontology_enrichment_disease=DOID:162!7.94e-34!235;DOID:14566!6.27e-33!239;DOID:0050687!8.01e-22!143;DOID:305!1.64e-18!106;DOID:2531!1.62e-15!51;DOID:0060083!1.62e-15!51;DOID:0050686!5.15e-15!137;DOID:1240!1.64e-14!39;DOID:8692!1.17e-12!31;DOID:299!9.42e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.58e-14;31!DOID:1240;1.01e-13;39!DOID:2531;4.98e-12;51!DOID:0060083;4.98e-12;51!DOID:299;6.64e-08;25!DOID:0050687;5.00e-07;143!DOID:305;7.88e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.40e-41,235;DOID:14566,2.44e-40,239;DOID:0050687,1.20e-25,143;DOID:305,2.07e-22,106;DOID:0050686,1.08e-18,137;DOID:2531,2.34e-18,51;DOID:0060083,2.34e-18,51;DOID:1240,5.80e-17,39;DOID:8692,1.43e-14,31;DOID:299,7.41e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.27e-07!27;UBERON:0003918!2.27e-07!27;UBERON:0005095!2.27e-07!27;UBERON:0007687!2.27e-07!27;UBERON:0001041!3.29e-07!98;UBERON:0005177!3.68e-07!107;UBERON:0000489!6.33e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.89e-09;24!UBERON:0011143;2.89e-09;24!UBERON:0000489;1.75e-08;29!UBERON:0006554;3.34e-08;30!UBERON:0001008;3.34e-08;30!UBERON:0004211;5.40e-08;10!UBERON:0009773;5.40e-08;10!UBERON:0001231;5.40e-08;10!UBERON:0004810;5.40e-08;10!UBERON:0006555;1.01e-07;15!UBERON:0004819;1.01e-07;15!UBERON:0001285;1.01e-07;15!UBERON:0007684;1.01e-07;15!UBERON:0001737;5.41e-07;9!UBERON:0001557;5.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,9.66e-09,26;UBERON:0003918,9.66e-09,26;UBERON:0011143,9.66e-09,26;UBERON:0005095,9.66e-09,26;UBERON:0007687,9.66e-09,26;UBERON:0005177,1.35e-08,101;UBERON:0000489,4.77e-08,31;UBERON:0004810,7.68e-08,10;UBERON:0004211,1.28e-07,15;UBERON:0009773,1.28e-07,15;UBERON:0001231,1.28e-07,15;UBERON:0001285,1.28e-07,15;UBERON:0007684,1.28e-07,15;UBERON:0004208,1.28e-07,15;UBERON:0005172,4.30e-07,54;UBERON:0005173,4.30e-07,54;UBERON:0001737,5.17e-07,9;UBERON:0006555,9.21e-07,16;UBERON:0004819,9.21e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.982935746006035,1.39560233594486,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.612002073732759,0.313454721478088,0.572471974262113,0.136874425072884,0.125542639594803,5.57817861960044,5.91124244039609,6.53299484903538,0,0.383829398097213,1.23852898652861,0,1.204823675113,0,4.10576163075599,8.38798471675787,2.05520307534393,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0.257575567634187,0.581592955118259,0,0.970336244751265,0.232429036905685,0,0,0.28769239232215,1.5369642391746,0.47296445977717,0.689491361473237,1.29096936716765,1.35426486594342,0,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0.989553900560148,1.19678194572979,1.70489900213078,0,1.13477044938228,0,1.7587406567972,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,1.91136614062614,2.64342657158052,5.60508562981536,3.95076127162616,0,0.786021525498329,0.616804496998528,3.00935691703221,1.62961133316795,0.473447805734733,0,1.00269411196656,0.589211814949674,0.221533894583621,0.812411591295047,2.0494611156108,1.56071217071854,1.64437904603676,2.21080014228679,1.73881851441031,0.296573126324121,0,0,2.26618685395132,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0.579297615531196,0,0,0.383587685530591,0,0,0,0,0,0.283604451492204,0.221729397462564,0.43917392846563,0.785874452986276,4.00724817121796,1.48313777113772,0.649094787309367,0.348259474598534,1.06366368415092,0.238490624305342,0,0.74291500265913,1.59009925893364,0.860234595106124,1.73570250803797,1.13061588384802,1.25849830862972,2.47606237746061,1.67195973229448,0.516833518338658,1.06729878806013,0,0,1.52054421143703,0.24406205754817,0.735326160691737,0,1.51809538082936,2.2452937262617,4.61707069981621,3.06633274931766,0,2.01521918323448,0,0,0.872188104285069,0,0,0,2.0078563452417,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.490385709340376,0.151357427644931,0,0.468642863667593,0.312160076830321,3.99330275081114,2.24173020827702,0.352303495931295,0.485618833104395,0.98315564691574,0.816616685019573,2.94802361548243,0.413303124703062,0,0,0,0,3.70339450698946,4.8796222750066,1.38532057742091,0,0,0,0.680593098960126,0.179389635688862,0,0,0,0.103052529238439,0,0,0.843881661206331,0.0974370051611986,0,0,0.161646056818812,0,0,0.169560592310488,0.193260853163297,1.09098448236334,0,3.29329006549908,1.85541675650079,1.85910308591229,1.55491582523056,2.52320850875628,2.91981887260664,0,0,1.38134921352481,0,0,6.15195360207188,7.58631105351458,6.7483088367375,7.16910822760561,9.58669554006587,8.54174228799948,6.87639671616838,7.45641567476315,5.77120735419586,2.95262181849859,2.80483547606892,0.8231480226628,0,0,1.96565443335525,1.18157981336281,11.4780405847809,4.18160691046586,0.514703430895577,0.109750285408626,2.24803506515239,5.5290934826397,1.85176890317059,0.977424915930974,0,2.88662684050547,0.463721619900307,0,0,0,0,5.53143078571493,4.29243081047436,1.23108503043699,3.7440682422278,1.78357394746474,0,0,0.283550194484773,0.268675568108545,0,0.383382679165211,0,0.088048434013226,0.829312462163088,3.60299883542404,0.6312121671319,7.49275152647595,14.5155601712146,1.17217447210047,3.4214489204541,4.01027221542962,3.60411669412701,2.5724378936752,0.560655421726804,0,0.1466765716419,0.387815147273333,0,0,0,0,1.02882949704857,1.41849132023278,0,0.142977993658148,1.62786481617433,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,2.85273810081437,0.289562613335158,0.821905290201534,0.358121926479791,4.81966119172167,0.788123040807709,0,0.385029108839245,0.254094624222463,2.60279707715243,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,0.206768026122887,0.647142602455851,0.533637789017222,3.03127571446259,0,0.604780586659361,0,0.153461973288062,0,0,0,0,1.48418066444991,0.308419387605311,0.177561725313127,0.492762936082855,0,0.232420756919918,5.438675231623,0,1.93370076765382,0.459257792658427,1.0925470080403,0.131124414959424,17.5967849033891,7.39347236202382,15.6869953835371,16.0753147118587,5.17202981575091,2.27466768141793,2.55140557914773,2.59099099322567,1.54227252690289,4.06419656315779,4.01351819083883,14.0181950174771,14.1282921517883,7.61174166055406,0.219259876645935,0,3.07740150139667,2.95213181129735,0.650756789328606,0.618246069886334,0,0,0,0,0,0,0.154048617114644,0.460511024178389,0.689182862422653,0,0.435050081742686,0.852266274161009,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0.286249773483982,0,0,0,1.02359116524534,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0.421258456238981,0.975267478179181,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0.92947049429925,0.28169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| ||
|short_description=p2@SLCO4A1 | |short_description=p2@SLCO4A1 | ||
}} | }} |
Latest revision as of 11:09, 17 September 2015
Short description: | p2@SLCO4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLCO4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000370512_5end |
EntrezGene: | SLCO4A1 |
HGNC: | 10953 |
UniProt: | C9JL32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.04e-15 | 253 |
kidney cell | 1.23e-08 | 17 |
kidney epithelial cell | 1.23e-08 | 17 |
kidney tubule cell | 7.68e-08 | 10 |
nephron tubule epithelial cell | 7.68e-08 | 10 |
epithelial cell of nephron | 1.28e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
kidney | 9.66e-09 | 26 |
kidney mesenchyme | 9.66e-09 | 26 |
upper urinary tract | 9.66e-09 | 26 |
kidney rudiment | 9.66e-09 | 26 |
kidney field | 9.66e-09 | 26 |
trunk region element | 1.35e-08 | 101 |
cavitated compound organ | 4.77e-08 | 31 |
nephron tubule epithelium | 7.68e-08 | 10 |
nephron epithelium | 1.28e-07 | 15 |
renal tubule | 1.28e-07 | 15 |
nephron tubule | 1.28e-07 | 15 |
nephron | 1.28e-07 | 15 |
uriniferous tubule | 1.28e-07 | 15 |
nephrogenic mesenchyme | 1.28e-07 | 15 |
abdomen element | 4.30e-07 | 54 |
abdominal segment element | 4.30e-07 | 54 |
larynx | 5.17e-07 | 9 |
excretory tube | 9.21e-07 | 16 |
kidney epithelium | 9.21e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.40e-41 | 235 |
disease of cellular proliferation | 2.44e-40 | 239 |
cell type cancer | 1.20e-25 | 143 |
carcinoma | 2.07e-22 | 106 |
organ system cancer | 1.08e-18 | 137 |
hematologic cancer | 2.34e-18 | 51 |
immune system cancer | 2.34e-18 | 51 |
leukemia | 5.80e-17 | 39 |
myeloid leukemia | 1.43e-14 | 31 |
adenocarcinoma | 7.41e-08 | 25 |