FFCP PHASE1:Hg19::chr1:29313976..29313993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2035 | |EntrezGene=2035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3377 | |HGNC=3377 | ||
|TSSclassifier=strong | |||
|UniProt=Q29RX4,Q4VB87 | |UniProt=Q29RX4,Q4VB87 | ||
|association_with_transcript=16bp_to_uc009vtl.1,uc009vtm.1_5end | |association_with_transcript=16bp_to_uc009vtl.1,uc009vtm.1_5end | ||
|cluster_id=chr1:29313976..29313993,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_10_at_EPB41_5end | |description=CAGE_peak_10_at_EPB41_5end | ||
|id=chr1:29313976..29313993,+ | |id=chr1:29313976..29313993,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.21e-11!172;CL:0000566!2.21e-11!172;CL:0000988!2.59e-10!182;CL:0002032!3.54e-10!165;CL:0000837!3.54e-10!165;CL:0002087!1.16e-09!119;CL:0000738!1.98e-09!140;CL:0002031!2.73e-08!124;CL:0000542!9.73e-08!53;CL:0000051!9.73e-08!53;CL:0000838!2.41e-07!52;CL:0000791!3.16e-07!18;CL:0000789!3.16e-07!18;CL:0002420!3.16e-07!18;CL:0002419!3.16e-07!18;CL:0000790!3.16e-07!18 | |ontology_enrichment_celltype=CL:0000037!2.21e-11!172;CL:0000566!2.21e-11!172;CL:0000988!2.59e-10!182;CL:0002032!3.54e-10!165;CL:0000837!3.54e-10!165;CL:0002087!1.16e-09!119;CL:0000738!1.98e-09!140;CL:0002031!2.73e-08!124;CL:0000542!9.73e-08!53;CL:0000051!9.73e-08!53;CL:0000838!2.41e-07!52;CL:0000791!3.16e-07!18;CL:0000789!3.16e-07!18;CL:0002420!3.16e-07!18;CL:0002419!3.16e-07!18;CL:0000790!3.16e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.36e-14;2!CL:0000123;2.36e-14;2!CL:0000558;2.36e-14;2!CL:0000242;2.36e-14;2!CL:0000624;9.16e-11;6!CL:0000775;4.18e-10;3!CL:0000895;3.33e-08;1!CL:0000785;7.59e-08;1!CL:0000819;7.59e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.06e-14,2;CL:0000765,2.06e-14,2;CL:0000050,2.06e-14,2;CL:0000038,2.06e-14,2;CL:0000558,2.06e-14,2;CL:0000547,2.06e-14,2;CL:0000549,2.06e-14,2;CL:0000550,2.06e-14,2;CL:0000552,2.06e-14,2;CL:0000242,3.54e-14,2;CL:0000624,9.97e-11,6;CL:0000775,3.82e-10,3;CL:0000810,3.58e-08,1;CL:0000895,3.58e-08,1;CL:0002436,3.58e-08,1;CL:0002427,3.58e-08,1;CL:0002428,3.58e-08,1;CL:0002429,3.58e-08,1;CL:0002433,3.58e-08,1;CL:0002431,3.58e-08,1;CL:0002432,3.58e-08,1;CL:0000819,5.40e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002427;3.33e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;7.59e-08;1!DOID:8675;7.59e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.40e-08,1;DOID:8675,5.40e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.46e-09!115;UBERON:0000178!7.61e-09!15;UBERON:0000179!7.61e-09!15;UBERON:0000463!7.61e-09!15;UBERON:0002390!8.95e-07!102;UBERON:0003061!8.95e-07!102 | |ontology_enrichment_uberon=UBERON:0007023!6.46e-09!115;UBERON:0000178!7.61e-09!15;UBERON:0000179!7.61e-09!15;UBERON:0000463!7.61e-09!15;UBERON:0002390!8.95e-07!102;UBERON:0003061!8.95e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.65e-28;15!UBERON:0000179;3.65e-28;15!UBERON:0000463;3.65e-28;15!UBERON:0002390;1.10e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.35e-28,15;UBERON:0000179,3.35e-28,15;UBERON:0000463,3.35e-28,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0.822335776043652,0,0,0,0,0,0,0,0,0.272906150057846,0,0.612167784741805,0,0,0.329851300186716,0,0.426224750532694,0.580418477257168,0.56738522469114,0,0,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0.300353785683013,0.48217676009124,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,3.53709686474248,1.23360899399706,0.334372990781356,0.651844533267181,0,0,0.445641827540694,0.294605907474837,0.886135578334485,0.541607727530031,0.896639238079726,0.650296737799391,0.328875809207352,0,0,0.593146252648242,1.33770414044857,1.04535523804977,0.113309342697566,2.29932296161153,0.68725489096526,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0.80642697289893,2.40696176205157,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0.74291500265913,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.882926198829301,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0,0,0.336255431980582,0.197030760201927,1.72502059887614,0.898401253958239,0,0,0,0,0,2.24702107184155,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.206768026122887,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,1.31555925987561,2.3529190592241,0,0,0,0.206082023295445,0.366277859273374,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,3.55213326462519,0.764637207142375,21.6465931126182,1.19115887728894,2.05681136543097,2.59389324477087,1.62009431171434,15.0693783495911,0,0,0.245040215981032,0.371606350251437,0.144269212976445,0.284567373393656,0.159426272728822,0.399158742865633,0.5745161103971,0,0.324621940274555,0,0,0,0,0.338583555603207,0.321176150207399,0.605399121573143,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,7.18449277040819,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0.874813840149763,0.694499979733169,0,0.120596438625408,0,0.884634079449797,0.886642856860642,0.438770794307945,0,0,0.0769502585037971,0,0,0.0897576444097721,0.217294743844016,0.31900115973192,0,0,0,0.156980256395025,0.332423363800313,0,0.588187602953219,0.671286347903371,0,0.635746315921515,0.421996129056054,0,0,0.216388639742091,0,0,0,0,0.247127877893006,0,0,0,0.468528891450678,1.45963831372533,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0,0,0.144090417154106,0,0.686379991447858,0,0.124252535565433,0.235694034616795,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0.229160424011684,0,0.399358000997982,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0.254019996197353,0,0.136203406111576,0,0.137539436597234,0.83088067605837,0,0,0.121499113316049,0.335434687599266,0.157611414598396,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.258565912723101,0,0,0,0.320362237703084,0,0.414239055347196,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.366078794705889,0,0,0,0,0.276697269872462,0,0,0,0,2.34167452903441,1.01444720027578,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.463044948647668,0.244736704506468,0,0,0,0.176689145945881,0,0.337884881306145,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0.516644938982447,0,0,0,0,0.25578874260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| ||
|short_description=p10@EPB41 | |short_description=p10@EPB41 | ||
}} | }} |
Latest revision as of 11:18, 17 September 2015
Short description: | p10@EPB41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EPB41_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 16bp_to_uc009vtl.1, uc009vtm.1_5end |
EntrezGene: | EPB41 |
HGNC: | 3377 |
UniProt: | Q29RX4Q4VB87 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.06e-14 | 2 |
erythroblast | 2.06e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 2.06e-14 | 2 |
erythroid progenitor cell | 2.06e-14 | 2 |
reticulocyte | 2.06e-14 | 2 |
proerythroblast | 2.06e-14 | 2 |
basophilic erythroblast | 2.06e-14 | 2 |
polychromatophilic erythroblast | 2.06e-14 | 2 |
orthochromatic erythroblast | 2.06e-14 | 2 |
Merkel cell | 3.54e-14 | 2 |
CD4-positive, alpha-beta T cell | 9.97e-11 | 6 |
neutrophil | 3.82e-10 | 3 |
CD4-positive, alpha-beta thymocyte | 3.58e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.58e-08 | 1 |
mature CD4 single-positive thymocyte | 3.58e-08 | 1 |
resting double-positive thymocyte | 3.58e-08 | 1 |
double-positive blast | 3.58e-08 | 1 |
CD69-positive double-positive thymocyte | 3.58e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.58e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.58e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.58e-08 | 1 |
B-1 B cell | 5.40e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 3.35e-28 | 15 |
haemolymphatic fluid | 3.35e-28 | 15 |
organism substance | 3.35e-28 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.40e-08 | 1 |
lymphosarcoma | 5.40e-08 | 1 |