FFCP PHASE1:Hg19::chr20:61299085..61299091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28231 | |EntrezGene=28231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10953 | |HGNC=10953 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000466961_5end | |association_with_transcript=-1bp_to_ENST00000466961_5end | ||
|cluster_id=chr20:61299085..61299091,+ | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_24_at_SLCO4A1_5end | |description=CAGE_peak_24_at_SLCO4A1_5end | ||
|id=chr20:61299085..61299091,+ | |id=chr20:61299085..61299091,+ | ||
|ontology_enrichment_celltype=CL:0000148!7.23e-25!10;CL:0000541!7.23e-25!10;CL:0000147!7.01e-18!14;CL:0002566!8.86e-17!1;CL:0000710!1.28e-12!20;CL:0000075!2.02e-09!27;CL:0002077!9.43e-08!33 | |ontology_enrichment_celltype=CL:0000148!7.23e-25!10;CL:0000541!7.23e-25!10;CL:0000147!7.01e-18!14;CL:0002566!8.86e-17!1;CL:0000710!1.28e-12!20;CL:0000075!2.02e-09!27;CL:0002077!9.43e-08!33 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.39e-66;3!CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.39e-66,3;CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4556!3.63e-21!3;DOID:3908!4.13e-13!5;DOID:3493!3.43e-09!2;DOID:4929!8.74e-09!2;DOID:3905!1.09e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.55e-98;2!DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.55e-98,2;DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0000989!6.47e-17!1;UBERON:0008811!6.47e-17!1;UBERON:0006258!6.47e-17!1;UBERON:0005876!6.47e-17!1;UBERON:0004874!6.47e-17!1;UBERON:0008947!4.93e-10!38;UBERON:0003258!4.93e-10!38;UBERON:0001875!6.42e-09!2;UBERON:0006514!6.42e-09!2;UBERON:0001737!1.02e-07!9;UBERON:0000065!3.48e-07!53;UBERON:0001041!3.74e-07!98;UBERON:0002048!8.27e-07!22;UBERON:0000117!8.27e-07!22;UBERON:0000171!8.27e-07!22;UBERON:0000170!8.27e-07!22;UBERON:0005597!8.27e-07!22;UBERON:0000118!8.27e-07!22 | |ontology_enrichment_uberon=UBERON:0000989!6.47e-17!1;UBERON:0008811!6.47e-17!1;UBERON:0006258!6.47e-17!1;UBERON:0005876!6.47e-17!1;UBERON:0004874!6.47e-17!1;UBERON:0008947!4.93e-10!38;UBERON:0003258!4.93e-10!38;UBERON:0001875!6.42e-09!2;UBERON:0006514!6.42e-09!2;UBERON:0001737!1.02e-07!9;UBERON:0000065!3.48e-07!53;UBERON:0001041!3.74e-07!98;UBERON:0002048!8.27e-07!22;UBERON:0000117!8.27e-07!22;UBERON:0000171!8.27e-07!22;UBERON:0000170!8.27e-07!22;UBERON:0005597!8.27e-07!22;UBERON:0000118!8.27e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.48e-40;5!UBERON:0010039;1.48e-40;5!UBERON:0001041;1.43e-15;14!UBERON:0005409;4.42e-10;22!UBERON:0004921;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0005409,4.34e-09,25 | |||
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|short_description=p24@SLCO4A1 | |short_description=p24@SLCO4A1 | ||
}} | }} |
Latest revision as of 11:21, 17 September 2015
Short description: | p24@SLCO4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_SLCO4A1_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | -1bp_to_ENST00000466961_5end |
EntrezGene: | SLCO4A1 |
HGNC: | 10953 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.39e-66 | 3 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.55e-98 | 2 |
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |