FFCP PHASE1:Hg19::chr16:67596417..67596497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10664 | |EntrezGene=10664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13723 | |HGNC=13723 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002etl.2,uc010cek.2_5end | |association_with_transcript=0bp_to_uc002etl.2,uc010cek.2_5end | ||
|cluster_id=chr16:67596417..67596497,+ | |||
|description=CAGE_peak_1_at_CTCF_5end | |description=CAGE_peak_1_at_CTCF_5end | ||
|id=chr16:67596417..67596497,+ | |id=chr16:67596417..67596497,+ | ||
|ontology_enrichment_celltype=CL:0000037!8.22e-14!172;CL:0000566!8.22e-14!172;CL:0002032!1.98e-12!165;CL:0000837!1.98e-12!165;CL:0000988!9.85e-12!182;CL:0000838!5.43e-11!52;CL:0000542!5.57e-11!53;CL:0000051!5.57e-11!53;CL:0000738!3.90e-07!140 | |ontology_enrichment_celltype=CL:0000037!8.22e-14!172;CL:0000566!8.22e-14!172;CL:0002032!1.98e-12!165;CL:0000837!1.98e-12!165;CL:0000988!9.85e-12!182;CL:0000838!5.43e-11!52;CL:0000542!5.57e-11!53;CL:0000051!5.57e-11!53;CL:0000738!3.90e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000542;4.06e-07;53 | |ontology_enrichment_celltype_v019=CL:0000542;4.06e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.05e-13,168;CL:0002032,2.54e-12,161;CL:0000837,2.54e-12,161;CL:0000988,6.15e-12,177;CL:0000838,5.43e-11,52;CL:0000542,5.57e-11,53;CL:0000051,5.57e-11,53;CL:0000738,5.03e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;4.06e-07;53 | |ontology_enrichment_development_v019=CL:0000051;4.06e-07;53 | ||
|ontology_enrichment_disease=DOID:1240!6.10e-10!39;DOID:2531!1.60e-09!51;DOID:0060083!1.60e-09!51;DOID:8692!7.86e-09!31 | |ontology_enrichment_disease=DOID:1240!6.10e-10!39;DOID:2531!1.60e-09!51;DOID:0060083!1.60e-09!51;DOID:8692!7.86e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.37e-08;31!DOID:1240;4.38e-08;39 | |ontology_enrichment_disease_v019=DOID:8692;1.37e-08;31!DOID:1240;4.38e-08;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,6.10e-10,39;DOID:2531,1.60e-09,51;DOID:0060083,1.60e-09,51;DOID:8692,7.86e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.67e-19!115;UBERON:0001049!2.92e-11!57;UBERON:0005068!2.92e-11!57;UBERON:0006241!2.92e-11!57;UBERON:0007135!2.92e-11!57;UBERON:0001017!8.71e-11!82;UBERON:0000073!1.45e-10!94;UBERON:0001016!1.45e-10!94;UBERON:0002780!5.16e-10!41;UBERON:0001890!5.16e-10!41;UBERON:0006240!5.16e-10!41;UBERON:0005743!7.39e-10!86;UBERON:0003080!8.05e-10!42;UBERON:0002020!1.23e-08!34;UBERON:0003528!1.23e-08!34;UBERON:0002791!1.67e-08!33;UBERON:0001893!2.06e-08!34;UBERON:0000955!4.38e-08!69;UBERON:0006238!4.38e-08!69;UBERON:0002616!4.99e-08!59;UBERON:0001869!6.13e-08!32;UBERON:0002619!2.97e-07!22;UBERON:0000956!5.76e-07!25;UBERON:0000203!5.76e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!1.67e-19!115;UBERON:0001049!2.92e-11!57;UBERON:0005068!2.92e-11!57;UBERON:0006241!2.92e-11!57;UBERON:0007135!2.92e-11!57;UBERON:0001017!8.71e-11!82;UBERON:0000073!1.45e-10!94;UBERON:0001016!1.45e-10!94;UBERON:0002780!5.16e-10!41;UBERON:0001890!5.16e-10!41;UBERON:0006240!5.16e-10!41;UBERON:0005743!7.39e-10!86;UBERON:0003080!8.05e-10!42;UBERON:0002020!1.23e-08!34;UBERON:0003528!1.23e-08!34;UBERON:0002791!1.67e-08!33;UBERON:0001893!2.06e-08!34;UBERON:0000955!4.38e-08!69;UBERON:0006238!4.38e-08!69;UBERON:0002616!4.99e-08!59;UBERON:0001869!6.13e-08!32;UBERON:0002619!2.97e-07!22;UBERON:0000956!5.76e-07!25;UBERON:0000203!5.76e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.41e-07;41!UBERON:0001890;1.41e-07;41!UBERON:0000922;1.42e-07;49!UBERON:0002791;1.66e-07;32!UBERON:0003528;2.23e-07;34!UBERON:0002020;2.23e-07;34!UBERON:0001869;2.78e-07;32!UBERON:0001893;2.85e-07;34!UBERON:0002619;3.12e-07;22!UBERON:0000956;6.11e-07;25!UBERON:0000203;6.11e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.41e-07;41!UBERON:0001890;1.41e-07;41!UBERON:0000922;1.42e-07;49!UBERON:0002791;1.66e-07;32!UBERON:0003528;2.23e-07;34!UBERON:0002020;2.23e-07;34!UBERON:0001869;2.78e-07;32!UBERON:0001893;2.85e-07;34!UBERON:0002619;3.12e-07;22!UBERON:0000956;6.11e-07;25!UBERON:0000203;6.11e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.16e-19,114;UBERON:0001016,1.40e-11,89;UBERON:0001049,2.00e-11,56;UBERON:0005068,2.00e-11,56;UBERON:0006241,2.00e-11,56;UBERON:0007135,2.00e-11,56;UBERON:0001017,6.83e-11,81;UBERON:0000073,1.57e-10,53;UBERON:0002616,1.57e-10,53;UBERON:0002780,5.16e-10,41;UBERON:0001890,5.16e-10,41;UBERON:0003080,5.16e-10,41;UBERON:0006240,5.16e-10,41;UBERON:0003528,1.23e-08,34;UBERON:0002020,1.23e-08,34;UBERON:0001893,2.06e-08,34;UBERON:0002791,2.93e-08,32;UBERON:0000955,3.55e-08,68;UBERON:0006238,3.55e-08,68;UBERON:0001869,6.13e-08,32;UBERON:0002619,2.97e-07,22;UBERON:0000956,5.76e-07,25;UBERON:0000203,5.76e-07,25 | |||
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| ||
|short_description=p1@CTCF | |short_description=p1@CTCF | ||
}} | }} |
Latest revision as of 11:39, 17 September 2015
Short description: | p1@CTCF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTCF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002etl.2, uc010cek.2_5end |
EntrezGene: | CTCF |
HGNC: | 13723 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.05e-13 | 168 |
hematopoietic oligopotent progenitor cell | 2.54e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.54e-12 | 161 |
hematopoietic cell | 6.15e-12 | 177 |
lymphoid lineage restricted progenitor cell | 5.43e-11 | 52 |
lymphocyte | 5.57e-11 | 53 |
common lymphoid progenitor | 5.57e-11 | 53 |
leukocyte | 5.03e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.16e-19 | 114 |
nervous system | 1.40e-11 | 89 |
neural tube | 2.00e-11 | 56 |
neural rod | 2.00e-11 | 56 |
future spinal cord | 2.00e-11 | 56 |
neural keel | 2.00e-11 | 56 |
central nervous system | 6.83e-11 | 81 |
regional part of nervous system | 1.57e-10 | 53 |
regional part of brain | 1.57e-10 | 53 |
regional part of forebrain | 5.16e-10 | 41 |
forebrain | 5.16e-10 | 41 |
anterior neural tube | 5.16e-10 | 41 |
future forebrain | 5.16e-10 | 41 |
brain grey matter | 1.23e-08 | 34 |
gray matter | 1.23e-08 | 34 |
telencephalon | 2.06e-08 | 34 |
regional part of telencephalon | 2.93e-08 | 32 |
brain | 3.55e-08 | 68 |
future brain | 3.55e-08 | 68 |
cerebral hemisphere | 6.13e-08 | 32 |
regional part of cerebral cortex | 2.97e-07 | 22 |
cerebral cortex | 5.76e-07 | 25 |
pallium | 5.76e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.10e-10 | 39 |
hematologic cancer | 1.60e-09 | 51 |
immune system cancer | 1.60e-09 | 51 |
myeloid leukemia | 7.86e-09 | 31 |