FFCP PHASE1:Hg19::chr9:4490394..4490446,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6505 | |EntrezGene=6505 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10939 | |HGNC=10939 | ||
|TSSclassifier=strong | |||
|UniProt=P43005 | |UniProt=P43005 | ||
|association_with_transcript=0bp_to_ENST00000262352,NM_004170,uc003zij.1_5end | |association_with_transcript=0bp_to_ENST00000262352,NM_004170,uc003zij.1_5end | ||
|cluster_id=chr9:4490394..4490446,+ | |||
|coexpression_cluster_id=C4823 | |coexpression_cluster_id=C4823 | ||
|description=CAGE_peak_2_at_SLC1A1_5end | |description=CAGE_peak_2_at_SLC1A1_5end | ||
|id=chr9:4490394..4490446,+ | |id=chr9:4490394..4490446,+ | ||
|ontology_enrichment_celltype=CL:0000359!3.68e-12!32;CL:0000055!1.83e-09!180;CL:0000192!4.33e-09!42;CL:0000514!4.33e-09!42;CL:0000393!1.67e-08!60;CL:0000211!1.67e-08!60;CL:0000680!2.27e-08!57;CL:0000056!2.27e-08!57;CL:0000355!2.27e-08!57;CL:0000187!1.42e-07!54;CL:0000183!4.39e-07!59;CL:0000222!4.94e-07!119;CL:0002334!5.02e-07!12 | |ontology_enrichment_celltype=CL:0000359!3.68e-12!32;CL:0000055!1.83e-09!180;CL:0000192!4.33e-09!42;CL:0000514!4.33e-09!42;CL:0000393!1.67e-08!60;CL:0000211!1.67e-08!60;CL:0000680!2.27e-08!57;CL:0000056!2.27e-08!57;CL:0000355!2.27e-08!57;CL:0000187!1.42e-07!54;CL:0000183!4.39e-07!59;CL:0000222!4.94e-07!119;CL:0002334!5.02e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.68e-12;32!CL:0002334;5.79e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.09e-12,32;CL:0000192,2.45e-08,43;CL:0000514,2.45e-08,43;CL:0002334,6.34e-08,12;CL:0000393,2.49e-07,61;CL:0000211,2.49e-07,61;CL:0000680,3.81e-07,58;CL:0000056,3.81e-07,58;CL:0000355,3.81e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;1.02e-13;33!UBERON:0004571;1.02e-13;33!UBERON:0002619;5.41e-12;22!UBERON:0001637;8.67e-12;42!UBERON:0003509;8.67e-12;42!UBERON:0004572;8.67e-12;42!UBERON:0001869;3.55e-11;32!UBERON:0001950;3.85e-11;20!UBERON:0002791;9.21e-11;32!UBERON:0001893;1.61e-10;34!UBERON:0003528;1.69e-10;34!UBERON:0002020;1.69e-10;34!UBERON:0000956;1.89e-09;25!UBERON:0000203;1.89e-09;25!UBERON:0002780;2.05e-09;41!UBERON:0001890;2.05e-09;41!UBERON:0000947;2.36e-08;21!UBERON:0010191;2.36e-08;21!UBERON:0007500;3.06e-07;56!UBERON:0001981;3.06e-07;56!UBERON:0004537;3.06e-07;56!UBERON:0000073;3.24e-07;53!UBERON:0002616;3.24e-07;53!UBERON:0003914;7.43e-07;74 | |||
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| ||
|short_description=p2@SLC1A1 | |short_description=p2@SLC1A1 | ||
}} | }} |
Latest revision as of 12:31, 17 September 2015
Short description: | p2@SLC1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC1A1_5end |
Coexpression cluster: | C4823_signet_tubular_Smooth_small_Hepatocyte_Fibroblast_Sertoli |
Association with transcript: | 0bp_to_ENST00000262352, NM_004170, uc003zij.1_5end |
EntrezGene: | SLC1A1 |
HGNC: | 10939 |
UniProt: | P43005 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.09e-12 | 32 |
smooth muscle cell | 2.45e-08 | 43 |
smooth muscle myoblast | 2.45e-08 | 43 |
preadipocyte | 6.34e-08 | 12 |
electrically responsive cell | 2.49e-07 | 61 |
electrically active cell | 2.49e-07 | 61 |
muscle precursor cell | 3.81e-07 | 58 |
myoblast | 3.81e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.81e-07 | 58 |