FFCP PHASE1:Hg19::chr8:22550645..22550655,-: Difference between revisions
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|id=chr8:22550645..22550655,-
|short_description=p12@EGR3
|description=CAGE_peak_12_at_EGR3_5end
|association_with_transcript=35bp_to_ENST00000519492_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1960 | |EntrezGene=1960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3240 | |HGNC=3240 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIM5 | |UniProt=E5RIM5 | ||
|association_with_transcript=35bp_to_ENST00000519492_5end | |||
|cluster_id=chr8:22550645..22550655,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_12_at_EGR3_5end | |||
|id=chr8:22550645..22550655,- | |||
|ontology_enrichment_celltype=CL:0002274!3.44e-11!5;CL:0000457!3.44e-11!5;CL:0002191!3.44e-11!5;CL:0000097!3.44e-11!5;CL:0000831!3.44e-11!5;CL:0002028!3.44e-11!5;CL:0000766!5.66e-10!76;CL:0000775!5.72e-09!3;CL:0000839!1.15e-07!70;CL:0000557!1.57e-07!71;CL:0002057!1.81e-07!42;CL:0000860!6.82e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000775;5.96e-34;3!CL:0000097;4.21e-21;5!CL:0000094;1.07e-13;8!CL:0000163;2.19e-12;9!CL:0000081;2.37e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,5.96e-34,3;CL:0000097,4.21e-21,5;CL:0002028,4.21e-21,5;CL:0000094,1.07e-13,8;CL:0000163,2.19e-12,9;CL:0000081,2.37e-10,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!8.11e-17!34;UBERON:0001869!7.57e-15!32;UBERON:0002791!3.26e-14!33;UBERON:0002780!1.13e-13!41;UBERON:0001890!1.13e-13!41;UBERON:0006240!1.13e-13!41;UBERON:0003080!2.62e-13!42;UBERON:0001876!1.87e-12!2;UBERON:0001950!6.64e-12!20;UBERON:0001049!3.39e-11!57;UBERON:0005068!3.39e-11!57;UBERON:0006241!3.39e-11!57;UBERON:0007135!3.39e-11!57;UBERON:0002020!3.70e-11!34;UBERON:0003528!3.70e-11!34;UBERON:0002619!8.54e-11!22;UBERON:0002616!9.53e-11!59;UBERON:0000349!1.32e-10!5;UBERON:0002420!3.71e-10!9;UBERON:0007245!3.71e-10!9;UBERON:0010009!3.71e-10!9;UBERON:0010011!3.71e-10!9;UBERON:0000454!3.71e-10!9;UBERON:0000956!1.89e-09!25;UBERON:0000203!1.89e-09!25;UBERON:0000955!9.86e-09!69;UBERON:0006238!9.86e-09!69;UBERON:0003056!1.30e-08!61;UBERON:0002371!8.45e-08!80;UBERON:0007023!1.56e-07!115;UBERON:0002426!2.66e-07!1;UBERON:0003831!2.66e-07!1;UBERON:0003898!2.66e-07!1;UBERON:0004830!2.66e-07!1;UBERON:0001774!2.66e-07!1;UBERON:0003830!2.66e-07!1;UBERON:0005175!2.66e-07!1;UBERON:0003897!2.66e-07!1;UBERON:0001103!2.66e-07!1;UBERON:0010084!2.66e-07!1;UBERON:0007190!3.78e-07!1;UBERON:0001474!4.18e-07!86;UBERON:0001017!4.86e-07!82;UBERON:0004913!8.02e-07!1;UBERON:0003703!8.02e-07!1;UBERON:0001174!8.02e-07!1;UBERON:0004914!8.02e-07!1;UBERON:0002581!9.51e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p12@EGR3 | |||
}} | }} |
Latest revision as of 12:32, 17 September 2015
Short description: | p12@EGR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_EGR3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 35bp_to_ENST00000519492_5end |
EntrezGene: | EGR3 |
HGNC: | 3240 |
UniProt: | E5RIM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 5.96e-34 | 3 |
mast cell | 4.21e-21 | 5 |
basophil mast progenitor cell | 4.21e-21 | 5 |
granulocyte | 1.07e-13 | 8 |
endocrine cell | 2.19e-12 | 9 |
blood cell | 2.37e-10 | 11 |