FFCP PHASE1:Hg19::chr9:4490449..4490481,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6505 | |EntrezGene=6505 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10939 | |HGNC=10939 | ||
|TSSclassifier=strong | |||
|UniProt=P43005 | |UniProt=P43005 | ||
|association_with_transcript=5bp_to_ENST00000262352,uc003zij.1_5end | |association_with_transcript=5bp_to_ENST00000262352,uc003zij.1_5end | ||
|cluster_id=chr9:4490449..4490481,+ | |||
|coexpression_cluster_id=C4823 | |coexpression_cluster_id=C4823 | ||
|description=CAGE_peak_1_at_SLC1A1_5end | |description=CAGE_peak_1_at_SLC1A1_5end | ||
|id=chr9:4490449..4490481,+ | |id=chr9:4490449..4490481,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.28e-11!32;CL:0000055!8.47e-10!180;CL:0000192!9.34e-10!42;CL:0000514!9.34e-10!42;CL:0000680!2.85e-08!57;CL:0000056!2.85e-08!57;CL:0000355!2.85e-08!57;CL:0000057!1.75e-07!75;CL:0000222!2.39e-07!119;CL:0000187!2.51e-07!54;CL:0000393!5.49e-07!60;CL:0000211!5.49e-07!60;CL:0002334!6.66e-07!12 | |ontology_enrichment_celltype=CL:0000359!1.28e-11!32;CL:0000055!8.47e-10!180;CL:0000192!9.34e-10!42;CL:0000514!9.34e-10!42;CL:0000680!2.85e-08!57;CL:0000056!2.85e-08!57;CL:0000355!2.85e-08!57;CL:0000057!1.75e-07!75;CL:0000222!2.39e-07!119;CL:0000187!2.51e-07!54;CL:0000393!5.49e-07!60;CL:0000211!5.49e-07!60;CL:0002334!6.66e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.00e-11;32!CL:0002334;2.05e-07;12!CL:0000192;5.02e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.77e-12,32;CL:0000192,1.16e-08,43;CL:0000514,1.16e-08,43;CL:0000057,4.11e-08,76;CL:0002334,1.69e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;5.02e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;4.26e-12;33!UBERON:0004571;4.26e-12;33!UBERON:0001637;1.10e-11;42!UBERON:0003509;1.10e-11;42!UBERON:0004572;1.10e-11;42!UBERON:0002619;1.99e-10;22!UBERON:0001950;1.16e-09;20!UBERON:0001869;1.20e-09;32!UBERON:0002791;3.46e-09;32!UBERON:0003528;6.44e-09;34!UBERON:0002020;6.44e-09;34!UBERON:0001893;6.80e-09;34!UBERON:0000956;4.74e-08;25!UBERON:0000203;4.74e-08;25!UBERON:0007500;7.72e-08;56!UBERON:0001981;7.72e-08;56!UBERON:0004537;7.72e-08;56!UBERON:0002780;9.45e-08;41!UBERON:0001890;9.45e-08;41!UBERON:0000160;5.84e-07;17!UBERON:0000947;9.23e-07;21!UBERON:0010191;9.23e-07;21 | |||
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| ||
|short_description=p1@SLC1A1 | |short_description=p1@SLC1A1 | ||
}} | }} |
Latest revision as of 12:33, 17 September 2015
Short description: | p1@SLC1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC1A1_5end |
Coexpression cluster: | C4823_signet_tubular_Smooth_small_Hepatocyte_Fibroblast_Sertoli |
Association with transcript: | 5bp_to_ENST00000262352, uc003zij.1_5end |
EntrezGene: | SLC1A1 |
HGNC: | 10939 |
UniProt: | P43005 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.77e-12 | 32 |
smooth muscle cell | 1.16e-08 | 43 |
smooth muscle myoblast | 1.16e-08 | 43 |
fibroblast | 4.11e-08 | 76 |
preadipocyte | 1.69e-07 | 12 |