FFCP PHASE1:Hg19::chr16:68119440..68119480,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4775 | |EntrezGene=4775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7777 | |HGNC=7777 | ||
|TSSclassifier=strong | |||
|UniProt=Q12968 | |UniProt=Q12968 | ||
|association_with_transcript=65bp_to_uc002evk.2,uc002evl.2,uc002evm.1,uc002evn.1,uc002evo.1_5end | |association_with_transcript=65bp_to_uc002evk.2,uc002evl.2,uc002evm.1,uc002evn.1,uc002evo.1_5end | ||
|cluster_id=chr16:68119440..68119480,+ | |||
|description=CAGE_peak_4_at_NFATC3_5end | |description=CAGE_peak_4_at_NFATC3_5end | ||
|id=chr16:68119440..68119480,+ | |id=chr16:68119440..68119480,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.40e-31!172;CL:0000566!2.40e-31!172;CL:0000988!8.50e-29!182;CL:0002032!8.10e-28!165;CL:0000837!8.10e-28!165;CL:0000542!3.56e-23!53;CL:0000051!3.56e-23!53;CL:0000738!3.67e-23!140;CL:0000838!9.47e-23!52;CL:0002087!6.83e-21!119;CL:0002031!2.55e-20!124;CL:0000791!4.15e-12!18;CL:0000789!4.15e-12!18;CL:0002420!4.15e-12!18;CL:0002419!4.15e-12!18;CL:0000790!4.15e-12!18;CL:0000084!1.46e-11!25;CL:0000827!1.46e-11!25;CL:0000945!1.80e-10!24;CL:0000826!1.80e-10!24;CL:0000763!5.44e-09!112;CL:0000049!5.44e-09!112;CL:0000625!2.64e-08!11;CL:0000236!4.10e-08!14 | |ontology_enrichment_celltype=CL:0000037!2.40e-31!172;CL:0000566!2.40e-31!172;CL:0000988!8.50e-29!182;CL:0002032!8.10e-28!165;CL:0000837!8.10e-28!165;CL:0000542!3.56e-23!53;CL:0000051!3.56e-23!53;CL:0000738!3.67e-23!140;CL:0000838!9.47e-23!52;CL:0002087!6.83e-21!119;CL:0002031!2.55e-20!124;CL:0000791!4.15e-12!18;CL:0000789!4.15e-12!18;CL:0002420!4.15e-12!18;CL:0002419!4.15e-12!18;CL:0000790!4.15e-12!18;CL:0000084!1.46e-11!25;CL:0000827!1.46e-11!25;CL:0000945!1.80e-10!24;CL:0000826!1.80e-10!24;CL:0000763!5.44e-09!112;CL:0000049!5.44e-09!112;CL:0000625!2.64e-08!11;CL:0000236!4.10e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.34e-17;53!CL:0000791;1.66e-15;18!CL:0000789;1.66e-15;18!CL:0002419;1.66e-15;18!CL:0000084;8.94e-15;25!CL:0000945;3.51e-13;24!CL:0000625;1.56e-10;11!CL:0000236;1.11e-09;13!CL:0002087;9.08e-07;104 | |ontology_enrichment_celltype_v019=CL:0000542;3.34e-17;53!CL:0000791;1.66e-15;18!CL:0000789;1.66e-15;18!CL:0002419;1.66e-15;18!CL:0000084;8.94e-15;25!CL:0000945;3.51e-13;24!CL:0000625;1.56e-10;11!CL:0000236;1.11e-09;13!CL:0002087;9.08e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.50e-33,168;CL:0000988,1.10e-30,177;CL:0000542,7.54e-30,53;CL:0000051,7.54e-30,53;CL:0000838,2.77e-29,52;CL:0002032,1.10e-28,161;CL:0000837,1.10e-28,161;CL:0000738,3.91e-26,136;CL:0002087,1.11e-22,115;CL:0002031,8.44e-22,120;CL:0000791,1.45e-15,18;CL:0000789,1.45e-15,18;CL:0002420,1.45e-15,18;CL:0002419,1.45e-15,18;CL:0000790,1.45e-15,18;CL:0000084,2.05e-14,25;CL:0000827,2.05e-14,25;CL:0000945,2.18e-13,24;CL:0000826,2.18e-13,24;CL:0000625,1.62e-10,11;CL:0000236,2.90e-10,14;CL:0000763,5.99e-07,108;CL:0000049,5.99e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000051;3.34e-17;53!CL:0000790;1.66e-15;18 | |ontology_enrichment_development_v019=CL:0000051;3.34e-17;53!CL:0000790;1.66e-15;18 | ||
|ontology_enrichment_disease=DOID:2531!6.22e-11!51;DOID:0060083!6.22e-11!51;DOID:1240!4.51e-09!39;DOID:8692!3.03e-07!31 | |ontology_enrichment_disease=DOID:2531!6.22e-11!51;DOID:0060083!6.22e-11!51;DOID:1240!4.51e-09!39;DOID:8692!3.03e-07!31 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.21e-10,51;DOID:0060083,1.21e-10,51;DOID:1240,6.21e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-14!115;UBERON:0002390!5.54e-09!102;UBERON:0003061!5.54e-09!102;UBERON:0002193!6.11e-08!112 | |ontology_enrichment_uberon=UBERON:0007023!1.43e-14!115;UBERON:0002390!5.54e-09!102;UBERON:0003061!5.54e-09!102;UBERON:0002193!6.11e-08!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.34e-07;15!UBERON:0000179;4.34e-07;15!UBERON:0000463;4.34e-07;15!UBERON:0002390;6.31e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.34e-07;15!UBERON:0000179;4.34e-07;15!UBERON:0000463;4.34e-07;15!UBERON:0002390;6.31e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.92e-13,114;UBERON:0002390,2.22e-08,98;UBERON:0003061,2.22e-08,98;UBERON:0003408,1.62e-07,10;UBERON:0002193,2.83e-07,108;UBERON:0000178,4.33e-07,15;UBERON:0000179,4.33e-07,15;UBERON:0000463,4.33e-07,15 | |||
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| ||
|short_description=p4@NFATC3 | |short_description=p4@NFATC3 | ||
}} | }} |
Latest revision as of 12:58, 17 September 2015
Short description: | p4@NFATC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFATC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 65bp_to_uc002evk.2, uc002evl.2, uc002evm.1, uc002evn.1, uc002evo.1_5end |
EntrezGene: | NFATC3 |
HGNC: | 7777 |
UniProt: | Q12968 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.50e-33 | 168 |
hematopoietic cell | 1.10e-30 | 177 |
lymphocyte | 7.54e-30 | 53 |
common lymphoid progenitor | 7.54e-30 | 53 |
lymphoid lineage restricted progenitor cell | 2.77e-29 | 52 |
hematopoietic oligopotent progenitor cell | 1.10e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-28 | 161 |
leukocyte | 3.91e-26 | 136 |
nongranular leukocyte | 1.11e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 8.44e-22 | 120 |
mature alpha-beta T cell | 1.45e-15 | 18 |
alpha-beta T cell | 1.45e-15 | 18 |
immature T cell | 1.45e-15 | 18 |
mature T cell | 1.45e-15 | 18 |
immature alpha-beta T cell | 1.45e-15 | 18 |
T cell | 2.05e-14 | 25 |
pro-T cell | 2.05e-14 | 25 |
lymphocyte of B lineage | 2.18e-13 | 24 |
pro-B cell | 2.18e-13 | 24 |
CD8-positive, alpha-beta T cell | 1.62e-10 | 11 |
B cell | 2.90e-10 | 14 |
myeloid cell | 5.99e-07 | 108 |
common myeloid progenitor | 5.99e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.92e-13 | 114 |
hematopoietic system | 2.22e-08 | 98 |
blood island | 2.22e-08 | 98 |
gland of gut | 1.62e-07 | 10 |
hemolymphoid system | 2.83e-07 | 108 |
blood | 4.33e-07 | 15 |
haemolymphatic fluid | 4.33e-07 | 15 |
organism substance | 4.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.21e-10 | 51 |
immune system cancer | 1.21e-10 | 51 |
leukemia | 6.21e-08 | 39 |