FFCP PHASE1:Hg19::chr2:48796000..48796019,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:48796000..48796019,+
|short_description=p3@STON1-GTF2A1L
|description=CAGE_peak_3_at_STON1-GTF2A1L_5end
|association_with_transcript=-139bp_to_ENST00000394...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286749 | |EntrezGene=286749 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30651 | |HGNC=30651 | ||
|TSSclassifier=strong | |||
|UniProt=Q53S48,Q3MIM1 | |UniProt=Q53S48,Q3MIM1 | ||
|association_with_transcript=-139bp_to_ENST00000394754,NM_172311,uc002rwp.1_5end | |||
|cluster_id=chr2:48796000..48796019,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_3_at_STON1-GTF2A1L_5end | |||
|id=chr2:48796000..48796019,+ | |||
|ontology_enrichment_celltype=CL:0000136!8.29e-20!15;CL:0002615!1.05e-08!3;CL:0000325!3.65e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.36e-41;13!CL:0002615;4.49e-20;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.16e-35,15;CL:0002615,4.97e-20,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;4.74e-09;7!UBERON:0003124;7.85e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.55e-26!115;UBERON:0003076!1.49e-11!15;UBERON:0003057!1.49e-11!15;UBERON:0002298!1.97e-10!8;UBERON:0004733!7.88e-09!12;UBERON:0002028!7.88e-09!12;UBERON:0007277!7.88e-09!12;UBERON:0004732!4.54e-08!13;UBERON:0001896!4.61e-08!3;UBERON:0005290!4.61e-08!3;UBERON:0010096!4.61e-08!3;UBERON:0000988!9.09e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.54e-10;6!UBERON:0002358;2.54e-10;6!UBERON:0003684;2.54e-10;6!UBERON:0001178;2.54e-10;6!UBERON:0002106;7.84e-10;3!UBERON:0002134;2.19e-08;1!UBERON:0005208;2.19e-08;1!UBERON:0004145;2.19e-08;1!UBERON:0005946;2.19e-08;1!UBERON:0005965;2.19e-08;1!UBERON:0002078;2.19e-08;1!UBERON:0000996;3.70e-08;1!UBERON:0001282;3.70e-08;1!UBERON:0009842;3.70e-08;1!UBERON:0003704;3.70e-08;1!UBERON:0001171;3.70e-08;1!UBERON:0001172;3.70e-08;1!UBERON:0004457;4.87e-07;9!UBERON:0000042;4.87e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.69e-13,12;UBERON:0000042,1.69e-13,12;UBERON:0003688,2.67e-10,6;UBERON:0002358,2.67e-10,6;UBERON:0003684,2.67e-10,6;UBERON:0001178,2.67e-10,6;UBERON:0002106,7.85e-10,3;UBERON:0004854,7.85e-10,3;UBERON:0009034,7.85e-10,3;UBERON:0002095,7.85e-10,3;UBERON:0004782,7.85e-10,3;UBERON:0003281,7.85e-10,3;UBERON:0009664,7.85e-10,3;UBERON:0002296,7.85e-10,3;UBERON:0005602,7.85e-10,3;UBERON:0001179,7.85e-10,3;UBERON:0006293,7.85e-10,3;UBERON:0002134,2.19e-08,1;UBERON:0005208,2.19e-08,1;UBERON:0005946,2.19e-08,1;UBERON:0005965,2.19e-08,1;UBERON:0002078,2.19e-08,1;UBERON:0000996,3.11e-08,1;UBERON:0001282,4.11e-08,1;UBERON:0009842,4.11e-08,1;UBERON:0003704,4.11e-08,1;UBERON:0001171,4.11e-08,1;UBERON:0001172,4.11e-08,1;UBERON:0007023,2.20e-07,114 | |||
|phase1_expression=0.181678379270557,7.49351833618441,1.55049844505568,1.0007329835313,1.34088328328186,0.872338524100369,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,2.57602529119306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802940375518498,0.80719882876419,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0.111443384277478,0,0,0,0,0,0,0,0.824019371133798,0,0.19924798825107,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,2.50672522863403,0,0,0,0.957003479195758,0,0.533034776018635,0,1.8837630767403,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,3.61569185248852,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,4.30723814746088,0,0.429226048136571,1.33902874465124,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.66116300871345,0,0,0.533937062838473,2.04365596629566,0.414239055347196,0,0,0,0,5.44017803369474,3.5096585163178,17.7680434522808,18.6887399504589,0,0,0.122026264901963,0,1.72022758707021,0.554645257684261,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,2.03067886542995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60710550763486,0.672567444437648,0,0.227662191351298,1.24183318227694,0,0.514464028312255,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,1.37415926980462,0.891139200981258,0,0,2.72553362141575,1.09578409555081,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.202056159043763,2.51027718874367,0.332660356546013,0,0,0,0,0,0.122241444182866,0,2.66302709674205,0,0 | |phase1_expression=0.181678379270557,7.49351833618441,1.55049844505568,1.0007329835313,1.34088328328186,0.872338524100369,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,2.57602529119306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802940375518498,0.80719882876419,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0.111443384277478,0,0,0,0,0,0,0,0.824019371133798,0,0.19924798825107,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,2.50672522863403,0,0,0,0.957003479195758,0,0.533034776018635,0,1.8837630767403,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,3.61569185248852,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,4.30723814746088,0,0.429226048136571,1.33902874465124,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.66116300871345,0,0,0.533937062838473,2.04365596629566,0.414239055347196,0,0,0,0,5.44017803369474,3.5096585163178,17.7680434522808,18.6887399504589,0,0,0.122026264901963,0,1.72022758707021,0.554645257684261,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,2.03067886542995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60710550763486,0.672567444437648,0,0.227662191351298,1.24183318227694,0,0.514464028312255,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,1.37415926980462,0.891139200981258,0,0,2.72553362141575,1.09578409555081,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.202056159043763,2.51027718874367,0.332660356546013,0,0,0,0,0,0.122241444182866,0,2.66302709674205,0,0 | ||
|short_description=p3@STON1-GTF2A1L | |||
}} | }} |
Latest revision as of 12:58, 17 September 2015
Short description: | p3@STON1-GTF2A1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STON1-GTF2A1L_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -139bp_to_ENST00000394754, NM_172311, uc002rwp.1_5end |
EntrezGene: | STON1-GTF2A1L |
HGNC: | 30651 |
UniProt: | Q53S48Q3MIM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.16e-35 | 15 |
adipocyte of omentum tissue | 4.97e-20 | 3 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.69e-13 | 12 |
serous membrane | 1.69e-13 | 12 |
omentum | 2.67e-10 | 6 |
peritoneum | 2.67e-10 | 6 |
abdominal cavity | 2.67e-10 | 6 |
visceral peritoneum | 2.67e-10 | 6 |
spleen | 7.85e-10 | 3 |
gastrointestinal system mesentery | 7.85e-10 | 3 |
stomach region | 7.85e-10 | 3 |
mesentery | 7.85e-10 | 3 |
gastrointestinal system serosa | 7.85e-10 | 3 |
mesentery of stomach | 7.85e-10 | 3 |
gut mesentery | 7.85e-10 | 3 |
dorsal mesentery | 7.85e-10 | 3 |
dorsal mesogastrium | 7.85e-10 | 3 |
peritoneal cavity | 7.85e-10 | 3 |
spleen primordium | 7.85e-10 | 3 |
tricuspid valve | 2.19e-08 | 1 |
right atrium valve | 2.19e-08 | 1 |
outflow tract of atrium | 2.19e-08 | 1 |
outflow part of right atrium | 2.19e-08 | 1 |
right cardiac atrium | 2.19e-08 | 1 |
vagina | 3.11e-08 | 1 |
intralobular bile duct | 4.11e-08 | 1 |
acinus | 4.11e-08 | 1 |
intrahepatic bile duct | 4.11e-08 | 1 |
portal lobule | 4.11e-08 | 1 |
hepatic acinus | 4.11e-08 | 1 |
adult organism | 2.20e-07 | 114 |