FFCP PHASE1:Hg19::chr20:62130629..62130646,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1917 | |EntrezGene=1917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3192 | |HGNC=3192 | ||
|TSSclassifier=strong | |||
|UniProt=Q05639,Q59GP5 | |UniProt=Q05639,Q59GP5 | ||
|association_with_transcript=-124bp_to_ENST00000217182,NM_001958,uc002yfe.1,uc010gkg.1_5end | |association_with_transcript=-124bp_to_ENST00000217182,NM_001958,uc002yfe.1,uc010gkg.1_5end | ||
|cluster_id=chr20:62130629..62130646,- | |||
|coexpression_cluster_id=C4062 | |||
|description=CAGE_peak_4_at_EEF1A2_5end | |description=CAGE_peak_4_at_EEF1A2_5end | ||
|id=chr20:62130629..62130646,- | |id=chr20:62130629..62130646,- | ||
|ontology_enrichment_celltype=CL:0000066!6.83e-07!254 | |ontology_enrichment_celltype=CL:0000066!6.83e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.09e-07;5!CL:0000077;6.44e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.86e-07,19;CL:0002322,9.55e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.22e-07;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.34e-26!143;DOID:162!7.03e-22!235;DOID:14566!1.47e-20!239;DOID:305!4.24e-19!106;DOID:0050686!9.65e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1324;2.39e-07;15!DOID:1115;4.67e-07;20!DOID:0050615;9.21e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.32e-23,143;DOID:162,3.67e-16,235;DOID:14566,2.07e-15,239;DOID:305,4.41e-15,106;DOID:1115,2.51e-07,20;DOID:1324,2.84e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0005743!4.80e-25!86;UBERON:0000073!4.96e-24!94;UBERON:0001016!4.96e-24!94;UBERON:0001017!5.83e-23!82;UBERON:0002346!2.75e-20!90;UBERON:0000955!5.27e-20!69;UBERON:0006238!5.27e-20!69;UBERON:0001049!1.27e-19!57;UBERON:0005068!1.27e-19!57;UBERON:0006241!1.27e-19!57;UBERON:0007135!1.27e-19!57;UBERON:0003075!3.35e-19!86;UBERON:0007284!3.35e-19!86;UBERON:0002780!2.18e-18!41;UBERON:0001890!2.18e-18!41;UBERON:0006240!2.18e-18!41;UBERON:0003080!1.27e-17!42;UBERON:0002616!2.28e-17!59;UBERON:0007023!1.25e-14!115;UBERON:0000924!1.45e-14!173;UBERON:0006601!1.45e-14!173;UBERON:0001893!1.46e-14!34;UBERON:0002020!3.15e-14!34;UBERON:0003528!3.15e-14!34;UBERON:0003056!4.82e-14!61;UBERON:0002791!6.58e-14!33;UBERON:0001869!6.72e-14!32;UBERON:0004121!1.21e-13!169;UBERON:0000956!4.22e-12!25;UBERON:0000203!4.22e-12!25;UBERON:0000033!1.18e-11!123;UBERON:0002619!1.43e-11!22;UBERON:0000153!4.15e-11!129;UBERON:0007811!4.15e-11!129;UBERON:0001950!7.24e-11!20 | |ontology_enrichment_uberon=UBERON:0005743!4.80e-25!86;UBERON:0000073!4.96e-24!94;UBERON:0001016!4.96e-24!94;UBERON:0001017!5.83e-23!82;UBERON:0002346!2.75e-20!90;UBERON:0000955!5.27e-20!69;UBERON:0006238!5.27e-20!69;UBERON:0001049!1.27e-19!57;UBERON:0005068!1.27e-19!57;UBERON:0006241!1.27e-19!57;UBERON:0007135!1.27e-19!57;UBERON:0003075!3.35e-19!86;UBERON:0007284!3.35e-19!86;UBERON:0002780!2.18e-18!41;UBERON:0001890!2.18e-18!41;UBERON:0006240!2.18e-18!41;UBERON:0003080!1.27e-17!42;UBERON:0002616!2.28e-17!59;UBERON:0007023!1.25e-14!115;UBERON:0000924!1.45e-14!173;UBERON:0006601!1.45e-14!173;UBERON:0001893!1.46e-14!34;UBERON:0002020!3.15e-14!34;UBERON:0003528!3.15e-14!34;UBERON:0003056!4.82e-14!61;UBERON:0002791!6.58e-14!33;UBERON:0001869!6.72e-14!32;UBERON:0004121!1.21e-13!169;UBERON:0000956!4.22e-12!25;UBERON:0000203!4.22e-12!25;UBERON:0000033!1.18e-11!123;UBERON:0002619!1.43e-11!22;UBERON:0000153!4.15e-11!129;UBERON:0007811!4.15e-11!129;UBERON:0001950!7.24e-11!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.89e-14;20!UBERON:0002619;1.95e-12;22!UBERON:0000956;1.64e-10;25!UBERON:0000203;1.64e-10;25!UBERON:0001869;2.49e-09;32!UBERON:0001893;1.08e-08;34!UBERON:0002791;1.38e-08;32!UBERON:0002780;4.74e-08;41!UBERON:0001890;4.74e-08;41!UBERON:0003528;4.88e-08;34!UBERON:0002020;4.88e-08;34!UBERON:0000073;4.15e-07;53!UBERON:0002616;4.15e-07;53!UBERON:0001871;9.13e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.60e-15,89;UBERON:0001017,4.17e-14,81;UBERON:0001950,5.88e-14,20;UBERON:0000955,6.27e-13,68;UBERON:0006238,6.27e-13,68;UBERON:0002619,2.30e-12,22;UBERON:0002780,3.21e-12,41;UBERON:0001890,3.21e-12,41;UBERON:0003080,3.21e-12,41;UBERON:0006240,3.21e-12,41;UBERON:0000073,1.43e-11,53;UBERON:0002616,1.43e-11,53;UBERON:0001869,7.20e-11,32;UBERON:0001049,1.37e-10,56;UBERON:0005068,1.37e-10,56;UBERON:0006241,1.37e-10,56;UBERON:0007135,1.37e-10,56;UBERON:0000956,1.89e-10,25;UBERON:0000203,1.89e-10,25;UBERON:0002346,3.08e-10,86;UBERON:0001893,5.79e-10,34;UBERON:0003056,6.90e-10,61;UBERON:0011216,9.86e-10,223;UBERON:0002791,1.54e-09,32;UBERON:0003075,1.73e-09,82;UBERON:0007284,1.73e-09,82;UBERON:0004121,2.11e-09,171;UBERON:0000924,2.11e-09,171;UBERON:0006601,2.11e-09,171;UBERON:0003528,9.83e-09,34;UBERON:0002020,9.83e-09,34;UBERON:0010371,1.11e-07,104;UBERON:0010314,1.43e-07,132;UBERON:0001871,7.70e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,3.17131635936948,1.32529768321485,1.39432731443422,1.34759371519982,1.00928340350251,0.72995471815166,0,0,0,0,0,0.828147600278907,0.842923450390509,0.723033089650446,1.54411561825352,1.08939722046203,1.66089433377768,0.674156540800822,1.56977172100277,1.53898862778556,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.811512834825538,0,0.144366447761074,0,0.190254152234598,15.8040879591855,10.3018339451385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75745460055828,0,0.381988425558278,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,2.01019518401218,2.55175500661265,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0.385076685522074,0,0,0.527758144464379,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,2.82095137628028,1.64007322849853,1.30151357865721,0,4.39533431128048,2.55779449753823,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0.356128142586949,0,0,0,0,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,3.92064345569651,0,0,0,0.797131363644112,0,0,0,0,0,0,0,0,2.37008488922245,0,0,0.425846237690326,0,0,0,0.500547425135725,0,0,0,0,0,0,0,0.146508179271894,2.42721043499027,0,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0.63337622438398,0.19924798825107,0,14.612099375548,1.1249555075237,0,0,0.179736702294654,1.43216939740487,0.511572370226872,0,0,0,0.969332746095218,1.57705766875147,0,7.55240507147176,0.962059999958153,0,1.70690172428249,5.59358030644086,6.14607972596635,4.48166385213904,6.12369688104834,3.64612489359914,0,0.60298219312704,3.05163472634166,4.86548743697388,6.79759523593159,0.658156191461918,0.435753854075961,0.41827123283581,0,1.13942055847001,0.922255617552241,0.359030577639089,0,0,0,0.533034776018635,0,0.31396051279005,0,2.25595660617181,0.588187602953219,0.671286347903371,0.189753732724185,0,0.632994193584081,1.79556088975062,0.141353071433941,0,0,0,0,0.889563386041866,1.72989514525104,2.50612678813093,0.606610196826093,0,1.40558667435203,0,1.17398771359254,1.21390189767046,1.57833761139756,1.20990716048664,1.22429104652196,0.063186579628488,0.150323419414493,1.03688191397247,1.32930774541437,0.330991955875499,0.941798755221676,1.19472429772959,5.97680046662565,4.85361355545985,0,0,0,0,0.171986032471617,0.870806981601766,0.438535902517113,0.739039113478883,0.0969890164884194,1.94163478721301,0.451961481561065,1.09633539717401,0.794858446811959,1.45614830698521,2.93327074102205,0.160317640503067,0,1.39866726707491,0.864542502924636,9.96468386643466,0,0,2.73355578243952,0,3.53350935791397,3.451893928307,1.32597682927218,0,0.600420288709789,0.273810757783986,0,0,0.525774708558629,1.39641200636127,1.60412296808179,0.717873024576814,2.59582700648688,6.86761677018513,2.67805748930247,4.29974223915048,0,0,0,0,0,0.295282444544246,0,0.795229689809303,0.544813624446302,1.44677833618517,1.65047323916681,1.24632101408756,0,0,1.51873891645062,0,0.0788057072991982,0.0524545881349981,0,1.79287339332845,0,2.1440859791201,5.95882773328889,0,0,0,0,0,0,0,1.69968137280189,0.146552233678082,0,0.646414781807753,0.52893040697076,1.36869470307464,3.52407511158336,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,1.83039397352945,0.3755727921195,0.573409195690071,0.665574309221114,0.372578417648301,0,0.124980407962107,0.303298235083296,1.42732666772484,0,2.34167452903441,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.761610424337591,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,1.92619830407303,1.07220795687463,1.82696004375648,0,0,1.46842022703881,0,1.54400723580486,3.0699766941019,1.59020231351293,0.38582807654183,1.8583668471838,8.71221163199019,1.0362910251936,0.607719912354764,1.24432592536558,0,0,0,0.327609848846413,0,0,0,1.06691729694141,0,0,0,0,0,10.8710215608104,3.5582187760905,0,7.97230358801702,0,1.06287460050841,0.991486114072017,0,0,0,2.40171224485641,0,0,1.02766760154335,0,1.91560630868582,2.2562800066483,2.7727886584389,2.14387482639075,2.58361033010962,0,0,2.71330363699803,0,1.61735932610474,0,0.690359926060101,0,0,0,0,0,0,0,1.8910523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| ||
|short_description=p4@EEF1A2 | |short_description=p4@EEF1A2 | ||
}} | }} |
Latest revision as of 13:02, 17 September 2015
Short description: | p4@EEF1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EEF1A2_5end |
Coexpression cluster: | C4062_argyrophil_somatostatinoma_MCF7_small_heart_neuroblastoma_cerebellum |
Association with transcript: | -124bp_to_ENST00000217182, NM_001958, uc002yfe.1, uc010gkg.1_5end |
EntrezGene: | EEF1A2 |
HGNC: | 3192 |
UniProt: | Q05639Q59GP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.86e-07 | 19 |
embryonic stem cell | 9.55e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.60e-15 | 89 |
central nervous system | 4.17e-14 | 81 |
neocortex | 5.88e-14 | 20 |
brain | 6.27e-13 | 68 |
future brain | 6.27e-13 | 68 |
regional part of cerebral cortex | 2.30e-12 | 22 |
regional part of forebrain | 3.21e-12 | 41 |
forebrain | 3.21e-12 | 41 |
anterior neural tube | 3.21e-12 | 41 |
future forebrain | 3.21e-12 | 41 |
regional part of nervous system | 1.43e-11 | 53 |
regional part of brain | 1.43e-11 | 53 |
cerebral hemisphere | 7.20e-11 | 32 |
neural tube | 1.37e-10 | 56 |
neural rod | 1.37e-10 | 56 |
future spinal cord | 1.37e-10 | 56 |
neural keel | 1.37e-10 | 56 |
cerebral cortex | 1.89e-10 | 25 |
pallium | 1.89e-10 | 25 |
neurectoderm | 3.08e-10 | 86 |
telencephalon | 5.79e-10 | 34 |
pre-chordal neural plate | 6.90e-10 | 61 |
organ system subdivision | 9.86e-10 | 223 |
regional part of telencephalon | 1.54e-09 | 32 |
neural plate | 1.73e-09 | 82 |
presumptive neural plate | 1.73e-09 | 82 |
ectoderm-derived structure | 2.11e-09 | 171 |
ectoderm | 2.11e-09 | 171 |
presumptive ectoderm | 2.11e-09 | 171 |
brain grey matter | 9.83e-09 | 34 |
gray matter | 9.83e-09 | 34 |
ecto-epithelium | 1.11e-07 | 104 |
structure with developmental contribution from neural crest | 1.43e-07 | 132 |
temporal lobe | 7.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.32e-23 | 143 |
cancer | 3.67e-16 | 235 |
disease of cellular proliferation | 2.07e-15 | 239 |
carcinoma | 4.41e-15 | 106 |
sarcoma | 2.51e-07 | 20 |
lung cancer | 2.84e-07 | 15 |