FFCP PHASE1:Hg19::chr11:2920725..2920736,-: Difference between revisions
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|id=chr11:2920725..2920736,-
|short_description=p5@SLC22A18AS
|description=CAGE_peak_5_at_SLC22A18AS_5end
|association_with_transcript=263bp_to_AF035407_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5003 | |EntrezGene=5003 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10965 | |HGNC=10965 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N1D0 | |UniProt=Q8N1D0 | ||
|association_with_transcript=263bp_to_AF035407_5end | |||
|cluster_id=chr11:2920725..2920736,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_5_at_SLC22A18AS_5end | |||
|id=chr11:2920725..2920736,- | |||
|ontology_enrichment_celltype=CL:0000148!1.17e-18!10;CL:0000541!1.17e-18!10;CL:0000147!5.35e-13!14;CL:0002567!1.02e-12!3;CL:0000710!2.54e-11!20;CL:0002076!2.87e-11!43;CL:0002077!8.35e-10!33;CL:0000066!4.98e-09!254;CL:0000223!9.66e-09!59;CL:0000075!5.23e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.50e-69;10!CL:0000147;1.82e-49;14!CL:0002567;7.46e-44;3!CL:0000710;1.51e-34;20!CL:0000075;1.67e-25;27!CL:0002077;7.51e-18;34!CL:0002566;1.54e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.84e-69,10;CL:0000541,1.84e-69,10;CL:0000147,1.47e-49,14;CL:0002567,6.94e-44,3;CL:0000710,1.30e-34,20;CL:0000075,1.50e-25,27;CL:0002077,3.28e-20,34;CL:0000333,6.85e-16,41;CL:0002566,1.54e-15,1;CL:0000133,4.67e-11,59;CL:0000221,5.08e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.61e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3111;2.56e-15;1!DOID:3112;2.56e-15;1!DOID:3603;2.56e-15;1!DOID:1909;1.79e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.06e-15,1;DOID:3111,2.75e-15,1;DOID:3603,2.75e-15,1;DOID:1909,1.86e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.62e-07!169;UBERON:0000925!8.62e-07!169;UBERON:0006595!8.62e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@SLC22A18AS | |||
}} | }} |
Latest revision as of 13:06, 17 September 2015
Short description: | p5@SLC22A18AS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC22A18AS_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 263bp_to_AF035407_5end |
EntrezGene: | SLC22A18AS |
HGNC: | 10965 |
UniProt: | Q8N1D0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.84e-69 | 10 |
melanoblast | 1.84e-69 | 10 |
pigment cell | 1.47e-49 | 14 |
light melanocyte | 6.94e-44 | 3 |
neurecto-epithelial cell | 1.30e-34 | 20 |
columnar/cuboidal epithelial cell | 1.50e-25 | 27 |
ecto-epithelial cell | 3.28e-20 | 34 |
migratory neural crest cell | 6.85e-16 | 41 |
dark melanocyte | 1.54e-15 | 1 |
neurectodermal cell | 4.67e-11 | 59 |
ectodermal cell | 5.08e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.06e-15 | 1 |
cystadenocarcinoma | 2.75e-15 | 1 |
mucinous cystadenocarcinoma | 2.75e-15 | 1 |
melanoma | 1.86e-08 | 2 |