FFCP PHASE1:Hg19::chr11:2920738..2920749,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:2920738..2920749,-
|short_description=p7@SLC22A18AS
|description=CAGE_peak_7_at_SLC22A18AS_5end
|association_with_transcript=250bp_to_AF035407_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5003 | |EntrezGene=5003 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10965 | |HGNC=10965 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N1D0 | |UniProt=Q8N1D0 | ||
|association_with_transcript=250bp_to_AF035407_5end | |||
|cluster_id=chr11:2920738..2920749,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_7_at_SLC22A18AS_5end | |||
|id=chr11:2920738..2920749,- | |||
|ontology_enrichment_celltype=CL:0002057!9.13e-18!42;CL:0000860!3.04e-16!45;CL:0000148!5.32e-14!10;CL:0000541!5.32e-14!10;CL:0002194!3.48e-11!63;CL:0000576!3.48e-11!63;CL:0000040!3.48e-11!63;CL:0000559!3.48e-11!63;CL:0002009!1.08e-10!65;CL:0000710!3.32e-10!20;CL:0002567!8.65e-10!3;CL:0000147!1.26e-09!14;CL:0000839!1.36e-09!70;CL:0000766!1.49e-09!76;CL:0000557!2.15e-09!71;CL:0000075!9.08e-09!27;CL:0002077!2.60e-08!33 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.55e-74;10!CL:0000147;4.71e-53;14!CL:0002567;2.83e-46;3!CL:0000710;4.43e-37;20!CL:0000075;2.12e-27;27!CL:0002077;1.22e-25;34!CL:0002566;7.57e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.40e-74,10;CL:0000541,1.40e-74,10;CL:0000147,3.08e-53,14;CL:0002567,1.21e-46,3;CL:0000710,3.29e-37,20;CL:0002077,3.04e-28,34;CL:0000075,1.71e-27,27;CL:0000333,3.89e-17,41;CL:0002566,7.57e-17,1;CL:0000221,1.14e-12,72;CL:0000133,5.90e-12,59 | |||
|ontology_enrichment_development_v019=CL:0000133;8.90e-07;59!CL:0000221;9.35e-07;72 | |||
|ontology_enrichment_disease=DOID:1909!6.31e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.78e-16;1!DOID:3112;1.78e-16;1!DOID:3603;1.78e-16;1!DOID:1909;4.34e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.65e-16,1;DOID:3111,3.07e-16,1;DOID:3603,3.07e-16,1;DOID:1909,4.70e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.51e-08!102;UBERON:0003061!2.51e-08!102;UBERON:0002371!8.03e-08!80;UBERON:0002193!4.25e-07!112;UBERON:0001474!5.76e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@SLC22A18AS | |||
}} | }} |
Latest revision as of 13:06, 17 September 2015
Short description: | p7@SLC22A18AS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC22A18AS_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 250bp_to_AF035407_5end |
EntrezGene: | SLC22A18AS |
HGNC: | 10965 |
UniProt: | Q8N1D0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.40e-74 | 10 |
melanoblast | 1.40e-74 | 10 |
pigment cell | 3.08e-53 | 14 |
light melanocyte | 1.21e-46 | 3 |
neurecto-epithelial cell | 3.29e-37 | 20 |
ecto-epithelial cell | 3.04e-28 | 34 |
columnar/cuboidal epithelial cell | 1.71e-27 | 27 |
migratory neural crest cell | 3.89e-17 | 41 |
dark melanocyte | 7.57e-17 | 1 |
ectodermal cell | 1.14e-12 | 72 |
neurectodermal cell | 5.90e-12 | 59 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.65e-16 | 1 |
cystadenocarcinoma | 3.07e-16 | 1 |
mucinous cystadenocarcinoma | 3.07e-16 | 1 |
melanoma | 4.70e-09 | 2 |