FFCP PHASE1:Hg19::chr2:50575014..50575025,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:50575014..50575025,-
|short_description=p25@NRXN1
|description=CAGE_peak_25_at_NRXN1_5end
|association_with_transcript=-120bp_to_NM_138735,uc010fbp.2_5end
...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt=A4FVB9,A7E294,P58400,Q9ULB1 | |UniProt=A4FVB9,A7E294,P58400,Q9ULB1 | ||
|association_with_transcript=-120bp_to_NM_138735,uc010fbp.2_5end | |||
|cluster_id=chr2:50575014..50575025,- | |||
|coexpression_cluster_id=C1910 | |||
|description=CAGE_peak_25_at_NRXN1_5end | |||
|id=chr2:50575014..50575025,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.30e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!5.08e-96!20;UBERON:0002619!2.79e-87!22;UBERON:0000956!1.08e-76!25;UBERON:0000203!1.08e-76!25;UBERON:0002780!1.25e-72!41;UBERON:0001890!1.25e-72!41;UBERON:0006240!1.25e-72!41;UBERON:0001869!3.35e-72!32;UBERON:0003080!8.21e-71!42;UBERON:0001893!8.56e-68!34;UBERON:0001049!1.66e-64!57;UBERON:0005068!1.66e-64!57;UBERON:0006241!1.66e-64!57;UBERON:0007135!1.66e-64!57;UBERON:0002791!1.77e-63!33;UBERON:0002020!1.57e-61!34;UBERON:0003528!1.57e-61!34;UBERON:0002616!1.49e-57!59;UBERON:0000955!5.74e-56!69;UBERON:0006238!5.74e-56!69;UBERON:0001017!1.78e-53!82;UBERON:0005743!9.32e-51!86;UBERON:0003056!2.00e-47!61;UBERON:0000073!1.86e-45!94;UBERON:0001016!1.86e-45!94;UBERON:0003075!3.28e-44!86;UBERON:0007284!3.28e-44!86;UBERON:0002346!5.35e-42!90;UBERON:0007023!5.17e-32!115;UBERON:0000153!5.88e-32!129;UBERON:0007811!5.88e-32!129;UBERON:0000033!1.91e-31!123;UBERON:0001871!2.07e-31!7;UBERON:0000200!4.02e-31!6;UBERON:0002021!7.16e-27!5;UBERON:0001872!9.81e-26!5;UBERON:0004121!1.32e-24!169;UBERON:0000924!6.76e-24!173;UBERON:0006601!6.76e-24!173;UBERON:0000025!2.49e-16!194;UBERON:0002771!3.16e-16!3;UBERON:0004111!5.86e-12!241;UBERON:0001870!6.07e-12!2;UBERON:0001905!8.37e-12!2;UBERON:0002757!8.37e-12!2;UBERON:0010134!8.37e-12!2;UBERON:0002784!8.37e-12!2;UBERON:0005408!8.37e-12!2;UBERON:0001899!8.37e-12!2;UBERON:0001876!1.21e-11!2;UBERON:0000477!5.52e-11!286;UBERON:0000483!1.35e-10!309;UBERON:0000119!1.97e-10!312;UBERON:0000064!2.54e-10!219;UBERON:0000349!6.75e-10!5;UBERON:0000475!1.17e-09!365;UBERON:0001894!3.20e-07!7;UBERON:0006222!3.20e-07!7;UBERON:0002902!6.23e-07!1;UBERON:0009899!6.23e-07!1;UBERON:0002702!7.77e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.28e-82;20!UBERON:0002619;1.32e-74;22!UBERON:0000956;8.22e-66;25!UBERON:0000203;8.22e-66;25!UBERON:0001869;2.22e-54;32!UBERON:0001893;1.70e-49;34!UBERON:0002791;4.00e-46;32!UBERON:0003528;5.16e-43;34!UBERON:0002020;5.16e-43;34!UBERON:0002780;1.21e-39;41!UBERON:0001890;1.21e-39;41!UBERON:0002021;3.29e-34;5!UBERON:0000200;5.41e-28;6!UBERON:0000073;7.53e-24;53!UBERON:0002616;7.53e-24;53!UBERON:0000955;6.81e-23;68!UBERON:0001905;8.24e-22;2!UBERON:0002757;8.24e-22;2!UBERON:0010134;8.24e-22;2!UBERON:0005408;8.24e-22;2!UBERON:0001899;8.24e-22;2!UBERON:0001872;2.31e-19;5!UBERON:0001017;5.48e-17;75!UBERON:0001870;7.01e-15;3!UBERON:0001871;5.19e-14;6!UBERON:0001016;2.65e-13;83!UBERON:0002902;3.09e-12;1!UBERON:0009899;3.09e-12;1!UBERON:0002581;8.62e-12;1!UBERON:0002022;8.62e-12;1!UBERON:0007190;8.62e-12;1!UBERON:0003296;2.13e-11;4!UBERON:0010133;2.13e-11;4!UBERON:0002784;2.13e-11;4!UBERON:0007023;1.49e-08;114!UBERON:0001894;6.98e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.03e-81,20;UBERON:0002619,1.80e-74,22;UBERON:0000956,1.08e-65,25;UBERON:0000203,1.08e-65,25;UBERON:0002780,4.58e-61,41;UBERON:0001890,4.58e-61,41;UBERON:0003080,4.58e-61,41;UBERON:0006240,4.58e-61,41;UBERON:0001869,1.18e-59,32;UBERON:0001893,3.83e-56,34;UBERON:0002791,2.09e-51,32;UBERON:0003528,2.26e-48,34;UBERON:0002020,2.26e-48,34;UBERON:0000073,4.76e-47,53;UBERON:0002616,4.76e-47,53;UBERON:0000955,5.83e-46,68;UBERON:0006238,5.83e-46,68;UBERON:0001049,1.83e-44,56;UBERON:0005068,1.83e-44,56;UBERON:0006241,1.83e-44,56;UBERON:0007135,1.83e-44,56;UBERON:0003056,1.03e-40,61;UBERON:0001017,2.02e-38,81;UBERON:0001016,1.90e-34,89;UBERON:0002021,3.61e-34,5;UBERON:0003075,7.04e-30,82;UBERON:0007284,7.04e-30,82;UBERON:0002346,2.09e-28,86;UBERON:0000200,1.09e-27,6;UBERON:0007023,3.44e-24,114;UBERON:0010371,3.66e-23,104;UBERON:0001905,7.44e-22,2;UBERON:0002757,7.44e-22,2;UBERON:0010134,7.44e-22,2;UBERON:0005408,7.44e-22,2;UBERON:0001899,7.44e-22,2;UBERON:0001872,5.57e-19,5;UBERON:0010314,8.13e-18,132;UBERON:0004121,4.06e-17,171;UBERON:0000924,4.06e-17,171;UBERON:0006601,4.06e-17,171;UBERON:0001870,4.28e-15,3;UBERON:0001871,3.97e-14,6;UBERON:0011216,1.51e-12,223;UBERON:0002902,3.27e-12,1;UBERON:0009899,3.27e-12,1;UBERON:0002022,1.19e-11,1;UBERON:0007190,1.32e-11,1;UBERON:0000025,1.48e-11,192;UBERON:0002581,1.63e-11,1;UBERON:0003296,2.02e-11,4;UBERON:0010133,2.02e-11,4;UBERON:0002784,2.02e-11,4;UBERON:0004111,8.95e-09,240;UBERON:0001894,6.78e-07,7;UBERON:0006222,6.78e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,2.95575571379191,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,1.85536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70939149080872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33649024647654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.09823638411767,0.876336514945499,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.256916900385838,1.41696576325585,0.638535436228605,2.05116364240755,1.76450187355203,2.62797559364028,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,1.56215619722769,0.620060389503552,1.01465296310251,0.546974809018219,0,0,0,0,1.60710550763486,1.68141861109412,0,0,0,0,0,0,1.05236437700559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0.315543124386369,1.76777874496378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,2.95575571379191,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,1.85536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70939149080872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33649024647654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.09823638411767,0.876336514945499,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.256916900385838,1.41696576325585,0.638535436228605,2.05116364240755,1.76450187355203,2.62797559364028,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,1.56215619722769,0.620060389503552,1.01465296310251,0.546974809018219,0,0,0,0,1.60710550763486,1.68141861109412,0,0,0,0,0,0,1.05236437700559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0.315543124386369,1.76777874496378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p25@NRXN1 | |||
}} | }} |
Latest revision as of 13:32, 17 September 2015
Short description: | p25@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_NRXN1_5end |
Coexpression cluster: | C1910_anaplastic_pineal_temporal_occipital_duodenum_brain_parietal |
Association with transcript: | -120bp_to_NM_138735, uc010fbp.2_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | A4FVB9A7E294P58400Q9ULB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data