FFCP PHASE1:Hg19::chr20:62372706..62372740,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:62372706..62372740,+
|short_description=p9@SLC2A4RG
|description=CAGE_peak_9_at_SLC2A4RG_5end
|association_with_transcript=-16bp_to_ENST00000491109_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56731 | |EntrezGene=56731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15930 | |HGNC=15930 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000491109_5end | |||
|cluster_id=chr20:62372706..62372740,+ | |||
|description=CAGE_peak_9_at_SLC2A4RG_5end | |||
|id=chr20:62372706..62372740,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.55e-11!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.40e-08!106;DOID:0050687!1.69e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!1.09e-13!238;UBERON:0009142!1.09e-13!238;UBERON:0001007!1.95e-09!155;UBERON:0001555!1.95e-09!155;UBERON:0007026!1.95e-09!155;UBERON:0004119!2.33e-09!169;UBERON:0000925!2.33e-09!169;UBERON:0006595!2.33e-09!169;UBERON:0004921!3.70e-09!129;UBERON:0004185!3.70e-09!129;UBERON:0000077!4.70e-09!130;UBERON:0001134!3.27e-08!61;UBERON:0002036!3.27e-08!61;UBERON:0003082!3.27e-08!61;UBERON:0002385!4.36e-08!63;UBERON:0001015!4.36e-08!63;UBERON:0000383!4.36e-08!63;UBERON:0003102!6.71e-08!95;UBERON:0000475!9.48e-08!365;UBERON:0002100!1.07e-07!216;UBERON:0001041!1.23e-07!98;UBERON:0000481!1.28e-07!347;UBERON:0000914!3.36e-07!83;UBERON:0002329!3.36e-07!83;UBERON:0003077!3.36e-07!83;UBERON:0003059!3.36e-07!83;UBERON:0007282!3.36e-07!83;UBERON:0009618!3.36e-07!83;UBERON:0007285!3.36e-07!83;UBERON:0004290!3.99e-07!70;UBERON:0005256!4.91e-07!143;UBERON:0000161!9.44e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.90e-11;9!UBERON:0001557;1.90e-11;9!UBERON:0000072;3.75e-07;37!UBERON:0001004;7.08e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.46e-11,9;UBERON:0001004,2.21e-09,74;UBERON:0004921,3.69e-08,118;UBERON:0000072,1.69e-07,47;UBERON:0001041,2.28e-07,87;UBERON:0001557,5.57e-07,19;UBERON:0004119,6.86e-07,160;UBERON:0000925,6.86e-07,160;UBERON:0006595,6.86e-07,160;UBERON:0000161,9.41e-07,36 | |||
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| ||
|short_description=p9@SLC2A4RG | |||
}} | }} |
Latest revision as of 14:16, 17 September 2015
Short description: | p9@SLC2A4RG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC2A4RG_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000491109_5end |
EntrezGene: | SLC2A4RG |
HGNC: | 15930 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.46e-11 | 9 |
respiratory system | 2.21e-09 | 74 |
subdivision of digestive tract | 3.69e-08 | 118 |
segment of respiratory tract | 1.69e-07 | 47 |
foregut | 2.28e-07 | 87 |
upper respiratory tract | 5.57e-07 | 19 |
endoderm-derived structure | 6.86e-07 | 160 |
endoderm | 6.86e-07 | 160 |
presumptive endoderm | 6.86e-07 | 160 |
orifice | 9.41e-07 | 36 |