FFCP PHASE1:Hg19::chr2:54683448..54683470,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6711 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11275 | |||
|TSSclassifier=strong | |||
|UniProt=B2ZZ89,Q01082 | |||
|association_with_transcript=0bp_to_NM_003128,uc002rxu.2_5end | |||
|cluster_id=chr2:54683448..54683470,+ | |||
|coexpression_cluster_id=C969 | |||
|description=CAGE_peak_1_at_SPTBN1_5end | |||
|id=chr2:54683448..54683470,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.43e-11!180;CL:0000222!4.31e-09!119;CL:0002139!4.65e-08!24;CL:0000057!3.23e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.39e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.76e-09,121;CL:0002139,4.38e-08,24;CL:0000057,1.70e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.67e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.85e-34!115;UBERON:0004111!4.94e-33!241;UBERON:0000477!7.73e-32!286;UBERON:0000025!1.08e-31!194;UBERON:0000475!1.71e-24!365;UBERON:0001049!8.53e-24!57;UBERON:0005068!8.53e-24!57;UBERON:0006241!8.53e-24!57;UBERON:0007135!8.53e-24!57;UBERON:0000119!1.35e-23!312;UBERON:0001017!2.37e-23!82;UBERON:0002616!3.82e-23!59;UBERON:0000483!3.99e-23!309;UBERON:0000955!4.04e-23!69;UBERON:0006238!4.04e-23!69;UBERON:0005743!8.24e-23!86;UBERON:0000073!1.04e-21!94;UBERON:0001016!1.04e-21!94;UBERON:0003075!1.20e-19!86;UBERON:0007284!1.20e-19!86;UBERON:0003080!1.58e-19!42;UBERON:0002780!7.19e-19!41;UBERON:0001890!7.19e-19!41;UBERON:0006240!7.19e-19!41;UBERON:0002346!2.97e-18!90;UBERON:0000481!8.05e-17!347;UBERON:0001893!1.72e-16!34;UBERON:0002020!2.17e-16!34;UBERON:0003528!2.17e-16!34;UBERON:0002791!6.53e-16!33;UBERON:0004872!8.34e-16!84;UBERON:0004121!1.59e-15!169;UBERON:0001869!1.79e-15!32;UBERON:0000468!3.02e-15!659;UBERON:0000924!8.15e-15!173;UBERON:0006601!8.15e-15!173;UBERON:0000033!3.28e-14!123;UBERON:0000467!2.15e-13!625;UBERON:0000153!2.24e-13!129;UBERON:0007811!2.24e-13!129;UBERON:0002619!2.90e-13!22;UBERON:0002049!3.00e-13!79;UBERON:0007798!3.00e-13!79;UBERON:0000480!4.48e-13!626;UBERON:0003056!7.33e-13!61;UBERON:0000055!1.17e-12!69;UBERON:0003914!3.79e-12!118;UBERON:0001950!4.47e-12!20;UBERON:0000956!1.09e-11!25;UBERON:0000203!1.09e-11!25;UBERON:0001981!5.05e-11!60;UBERON:0007500!5.05e-11!60;UBERON:0004537!5.05e-11!60;UBERON:0006965!5.05e-11!60;UBERON:0001009!1.90e-10!113;UBERON:0000064!4.52e-10!219;UBERON:0004535!1.71e-09!110;UBERON:0007100!5.07e-08!27;UBERON:0002050!1.13e-07!605;UBERON:0005423!1.13e-07!605;UBERON:0000922!1.31e-07!612;UBERON:0000923!1.73e-07!604;UBERON:0005291!1.73e-07!604;UBERON:0006598!1.73e-07!604;UBERON:0002532!1.73e-07!604;UBERON:0002100!1.74e-07!216;UBERON:0000062!4.02e-07!511;UBERON:0003103!5.70e-07!69;UBERON:0000948!8.96e-07!24;UBERON:0005498!8.96e-07!24;UBERON:0004140!8.96e-07!24;UBERON:0009881!8.96e-07!24;UBERON:0004141!8.96e-07!24;UBERON:0003084!8.96e-07!24;UBERON:0007005!8.96e-07!24;UBERON:0004139!8.96e-07!24;UBERON:0004291!8.96e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.31e-14;34!UBERON:0003528;5.33e-14;34!UBERON:0002020;5.33e-14;34!UBERON:0001869;5.94e-14;32!UBERON:0002780;6.86e-14;41!UBERON:0001890;6.86e-14;41!UBERON:0002791;7.78e-14;32!UBERON:0002619;2.63e-13;22!UBERON:0000073;1.17e-12;53!UBERON:0002616;1.17e-12;53!UBERON:0001950;4.10e-12;20!UBERON:0000956;1.02e-11;25!UBERON:0000203;1.02e-11;25!UBERON:0001017;2.61e-11;75!UBERON:0000955;2.14e-10;68!UBERON:0007023;7.63e-10;114!UBERON:0001016;3.44e-09;83!UBERON:0007100;2.79e-08;25!UBERON:0000948;5.33e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.97e-33,114;UBERON:0004111,4.43e-32,240;UBERON:0000025,7.75e-31,192;UBERON:0001049,3.23e-23,56;UBERON:0005068,3.23e-23,56;UBERON:0006241,3.23e-23,56;UBERON:0007135,3.23e-23,56;UBERON:0001017,8.10e-23,81;UBERON:0010314,9.68e-23,132;UBERON:0000955,1.45e-22,68;UBERON:0006238,1.45e-22,68;UBERON:0000119,1.54e-22,309;UBERON:0000483,4.44e-22,306;UBERON:0000073,1.05e-21,53;UBERON:0002616,1.05e-21,53;UBERON:0001016,1.27e-21,89;UBERON:0002780,6.16e-19,41;UBERON:0001890,6.16e-19,41;UBERON:0003080,6.16e-19,41;UBERON:0006240,6.16e-19,41;UBERON:0003075,1.58e-18,82;UBERON:0007284,1.58e-18,82;UBERON:0002346,4.79e-17,86;UBERON:0001893,1.50e-16,34;UBERON:0003528,1.90e-16,34;UBERON:0002020,1.90e-16,34;UBERON:0004872,1.47e-15,83;UBERON:0001869,1.58e-15,32;UBERON:0002791,2.29e-15,32;UBERON:0004121,4.66e-14,171;UBERON:0000924,4.66e-14,171;UBERON:0006601,4.66e-14,171;UBERON:0011216,1.07e-13,223;UBERON:0002619,2.61e-13,22;UBERON:0002049,5.59e-13,78;UBERON:0007798,5.59e-13,78;UBERON:0003056,6.98e-13,61;UBERON:0010371,9.67e-13,104;UBERON:0000055,2.07e-12,68;UBERON:0001950,4.07e-12,20;UBERON:0003914,6.95e-12,117;UBERON:0000956,9.93e-12,25;UBERON:0000203,9.93e-12,25;UBERON:0007500,9.55e-11,59;UBERON:0001981,9.55e-11,59;UBERON:0004537,9.55e-11,59;UBERON:0006965,9.55e-11,59;UBERON:0001009,3.70e-10,112;UBERON:0004535,3.26e-09,109;UBERON:0000923,1.60e-08,560;UBERON:0010316,1.60e-08,560;UBERON:0005291,1.60e-08,560;UBERON:0006598,1.60e-08,560;UBERON:0010317,1.60e-08,560;UBERON:0002532,1.60e-08,560;UBERON:0002050,2.15e-08,564;UBERON:0005423,3.53e-08,581;UBERON:0007100,4.79e-08,27;UBERON:0000922,7.28e-08,592;UBERON:0003104,3.35e-07,160;UBERON:0009142,3.35e-07,160;UBERON:0005256,4.06e-07,122;UBERON:0000948,8.54e-07,24;UBERON:0005498,8.54e-07,24;UBERON:0004140,8.54e-07,24;UBERON:0009881,8.54e-07,24;UBERON:0004141,8.54e-07,24;UBERON:0003084,8.54e-07,24;UBERON:0007005,8.54e-07,24;UBERON:0004139,8.54e-07,24;UBERON:0004291,8.54e-07,24;UBERON:0003103,8.68e-07,68 | |||
|phase1_expression=167.689144066724,178.988037972862,253.29506416046,207.15172759098,172.97394354336,163.127304006769,58.2589719787114,89.70422202661,185.180610393685,35.3856868562173,32.7966548947041,165.578560074671,137.422595657024,44.0608216537766,70.919038405774,84.7129684529237,89.8014846755726,70.8400787675752,81.4847773980147,37.5519227134203,50.796172119819,45.1374798928446,40.6455101726101,43.7998160233229,42.1823269038537,0.840547463227464,0.985207073399349,1.02324015707783,0,0,8.82451902901633,0,3.614471025339,6.65557218300218,0,1.84820002233648,6.45920966536664,2.21598163412751,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,33.9023721474687,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,0,0,3.96513985737078,4.48406850385229,3.68737718685108,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,0.201606743224732,0,0.144824403882799,324.263132197569,116.701949588433,149.2156096714,106.263110801062,88.7368101825524,67.0639382788614,67.5993054993434,67.6422469720664,57.8553081044095,43.9024206975877,38.5594709192823,274.663121318703,1.82147644146271,3.70784442784429,0.324547393654683,0,0,0,0,0.371457501329565,107.927987200121,90.3246324861431,225.294185543329,216.512941756896,140.532311130318,104.544855937226,79.6270822505248,287.359436196294,355.76626268671,422.417413309014,313.401208710916,193.869386958221,465.182281686811,180.522572449822,117.470582442855,152.34533645264,179.174439355684,155.741677508435,81.2578178569181,134.795723658674,121.46275622586,0,0,0.872188104285069,130.206651344173,87.1217920252309,305.070752593656,357.398429453022,89.376432313986,157.550405639988,101.41154594322,98.4203518184468,248.346406249014,105.478456230566,154.798422248445,254.43183587113,209.15186058624,33.2736433203991,79.2886595149014,77.0136959085007,63.9640352761709,52.4932208937629,64.7491777472526,57.7252815546241,89.4195270096432,41.5179992513776,104.565690549875,65.340157150513,90.0051622573947,100.117749813183,56.0522150616666,35.1822478163998,49.7971709090417,109.717389731736,86.0396136926442,79.6868269077451,91.4949778741175,42.4236365018479,308.012004477776,85.422955527427,59.5528642258369,232.870690561496,150.147535100405,248.107840063941,100.503102419059,188.860715777977,98.8985602386166,284.745297347361,117.639770464859,121.557834727747,229.336196765733,83.7249936271691,59.5157679009812,5.41130388857231,10.6370987030426,4.58887352622406,9.87987019649723,9.93973262411139,12.3165579441689,26.5372300839348,9.08355063152262,6.20461510428911,64.1443082552245,77.1889125831462,48.3472224733682,69.1908212767649,66.4129123136019,19.7572356066539,17.7013924582007,17.1117831217272,18.5293874190422,21.1343060769634,15.6598608613324,14.1572873568173,15.893938675153,7.69494313892781,206.683527294901,68.7184691636885,75.3180440736462,80.8547912620481,11.4079531339648,40.2959158837827,69.7132089884057,0,4.30459534900897,49.9262327968709,24.913314787758,1.1240175325762,1.50793458617446,4.53683381276795,15.6387986548956,22.8785652761507,24.5363281442965,50.6615869741086,98.9755292407977,233.151813134134,160.192987351507,257.413867973411,1.58040879591855,3.43394464837949,0,0,0,5.62403003920662,22.677587306846,15.1699354049354,13.0755443146159,17.1474023723238,20.3192819957562,0.985326475791887,0,13.2689993946094,13.8355155280283,5.93339437103986,139.568371654188,197.48801601363,220.368800754888,130.015058977256,120.925131419108,92.8060048737705,211.225733713997,86.7894592833092,173.076147326812,63.7309703784056,99.9270362807622,118.026627131121,51.563467905916,43.8797892365036,39.5228260263191,15.1752350814664,19.858878483259,25.0436848275133,122.532140565032,57.517890171493,43.6317378493807,33.225090797961,88.1372032881514,19.7987968233357,97.6663581673059,108.941682325037,89.7757460814872,0,0,0,109.748183815145,88.4436905922677,129.799583587054,70.6532776537787,66.985281151425,74.3102997445567,0,0,0.215627574859517,0.128343036279748,90.7117808474194,119.728665549012,31.7048413238855,64.6612784190586,34.4486925892708,0,0,0,60.2415224340977,51.5175636691467,50.4552944081508,58.0238703670952,62.4501460790066,61.8193466933024,137.406879786453,167.326031448612,77.3185513790349,63.118573488428,65.7583342550082,80.3849574841826,65.6840125378706,61.4815634433005,73.4326926955232,0,0,0,56.6848558604505,106.518681286718,121.258507625202,138.196048955059,546.631548852078,121.525820889521,216.811440540646,207.753143121082,80.4269605718037,164.74405375394,38.2440040630586,56.2870669242613,68.2476666474754,79.445927665094,64.4967600452774,4.47179963489002,43.3093975855095,5.70902131402557,46.4998515066657,47.3437036817464,50.4828997593783,15.7919864517594,37.8145305182676,14.9026456143602,11.6911379722609,50.4536786107946,179.698746832017,95.7627560706783,129.549549661284,223.62951640092,34.952090443157,25.5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| |||
|short_description=p1@SPTBN1 | |||
}} |
Latest revision as of 15:19, 17 September 2015
Short description: | p1@SPTBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPTBN1_5end |
Coexpression cluster: | C969_mature_insula_mesodermal_occipital_Preadipocyte_temporal_heart |
Association with transcript: | 0bp_to_NM_003128, uc002rxu.2_5end |
EntrezGene: | SPTBN1 |
HGNC: | 11275 |
UniProt: | B2ZZ89Q01082 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.76e-09 | 121 |
endothelial cell of vascular tree | 4.38e-08 | 24 |
fibroblast | 1.70e-07 | 76 |