FFCP PHASE1:Hg19::chr16:69752391..69752446,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1728 | |EntrezGene=1728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2874 | |HGNC=2874 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB590179,DQ892892,DQ896139_5end | |association_with_transcript=0bp_to_AB590179,DQ892892,DQ896139_5end | ||
|cluster_id=chr16:69752391..69752446,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_2_at_NQO1_5end | |description=CAGE_peak_2_at_NQO1_5end | ||
|id=chr16:69752391..69752446,- | |id=chr16:69752391..69752446,- | ||
|ontology_enrichment_celltype=CL:0000220!1.79e-13!246;CL:0000066!2.55e-13!254;CL:0002321!3.23e-13!248;CL:0000055!4.99e-13!180;CL:0000057!9.43e-10!75;CL:0000222!2.14e-08!119;CL:0000548!1.61e-07!679;CL:0000004!1.61e-07!679;CL:0000255!1.61e-07!679;CL:0000012!4.45e-07!682 | |ontology_enrichment_celltype=CL:0000220!1.79e-13!246;CL:0000066!2.55e-13!254;CL:0002321!3.23e-13!248;CL:0000055!4.99e-13!180;CL:0000057!9.43e-10!75;CL:0000222!2.14e-08!119;CL:0000548!1.61e-07!679;CL:0000004!1.61e-07!679;CL:0000255!1.61e-07!679;CL:0000012!4.45e-07!682 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.36e-07;29 | |||
|ontology_enrichment_disease=DOID:305!7.77e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.50e-10!365;UBERON:0002100!5.34e-10!216;UBERON:0000481!1.26e-08!347;UBERON:0008947!2.87e-08!38;UBERON:0003258!2.87e-08!38;UBERON:0003104!1.04e-07!238;UBERON:0009142!1.04e-07!238;UBERON:0000072!3.40e-07!46;UBERON:0000477!5.33e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;3.84e-09;7!UBERON:0000072;9.43e-09;37!UBERON:0000369;4.23e-08;4!UBERON:0002435;4.23e-08;4!UBERON:0000204;4.23e-08;4!UBERON:0001737;6.78e-08;9!UBERON:0001557;6.78e-08;9!UBERON:0002420;7.34e-07;9!UBERON:0000125;7.34e-07;9!UBERON:0007245;7.34e-07;9!UBERON:0002308;7.34e-07;9!UBERON:0010009;7.34e-07;9!UBERON:0010011;7.34e-07;9!UBERON:0000454;7.34e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,5.64e-10,38;UBERON:0003258,5.64e-10,38;UBERON:0009663,2.07e-09,7;UBERON:0000369,4.00e-08,4;UBERON:0002435,4.00e-08,4;UBERON:0000204,4.00e-08,4;UBERON:0010082,4.00e-08,4;UBERON:0001737,4.09e-08,9;UBERON:0000072,5.49e-08,47;UBERON:0002420,4.63e-07,9;UBERON:0000125,4.63e-07,9;UBERON:0007245,4.63e-07,9;UBERON:0002308,4.63e-07,9;UBERON:0010009,4.63e-07,9;UBERON:0010011,4.63e-07,9;UBERON:0000454,4.63e-07,9 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.704772020479856,2.00146596706261,0,0,0,0,1.04474251279935,0.737201809504527,0.697801167972428,0,0.263766978228454,0.74259811776028,2.98257638155124,0.672325146451775,0.602694528023977,0,0.975865597581014,0.369363174230364,0.204000691244253,0.313454721478088,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0,0,0,1.83884244895785,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,1.80719576192283,1.00267582127178,2.75208386025565,0,1.45990461090791,0.0945348171640679,0.665188192387692,0.527008714158756,0.261958150995425,0,1.11235332835329,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0.596287222100115,0.860234595106124,1.04142150482278,1.69592382577203,0,0.550236083880135,2.08994966536811,0.516833518338658,0.35576626268671,0,0,0,0,0.367663080345869,0,0.357198913136319,0,0.563057402416611,3.06633274931766,0,0.183201743930407,0,0,0,0.993943903390637,0.633152558322899,0.132409180813219,0.286836620748814,1.06400514659507,1.12135520028461,0,0.49333509683432,0,0.808264032418128,0.163461903113459,1.21085942115945,2.30470369792,0.234321431833797,0,1.71141546463335,0.298897361103602,0.352303495931295,0.809364721840658,0.140450806702248,1.42907919878425,0.245668634623536,1.34323515528495,0,1.7308685049499,1.82032272387605,0,0.841680569770331,0.375355559615893,0,0.877955241761676,2.14541457059314,1.05166641234618,0.340296549480063,1.07633781413317,0.427114777637135,0.423863802319124,0,0.824420233907511,0.515281080091258,0.930584281657949,0.168776332241266,0.292311015483596,0.757301322732344,0.920498986422993,0.969876340912871,0,0.503760491138201,0.339121184620975,0,0.272746120590835,0.573609190778008,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,4.69348596989448,4.5026865673502,5.52539685409922,0.464367928031979,0,0.709840800239063,2.19160097101532,1.20505514941741,2.09558548191549,1.52515610864684,0.71181185733329,1.48314438976181,1.96221465125346,3.8474715694639,1.4763109092493,0,0.8231480226628,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0.603173834469785,0.555530670951178,0,4.15973914111831,0,0.115930404975077,0.234817388471643,0.433099343283221,0.462985512576611,0.570762456703795,0.790204397959275,2.57545848628462,0,0.468008530278475,0.297262324577456,2.81201501960331,0,0.141775097242386,0.0895585227028483,0,0.766765358330422,0.492663237895943,0,0,0,0,0.063497894292169,0.381988425558278,1.17217447210047,1.71072446022705,1.95372236136315,0.901029173531752,3.42991719156694,0.560655421726804,0,0.2933531432838,0.129271715757778,0,0.845302752556,0,2.08014873822732,0.514414748524284,1.41849132023278,1.8649552531127,0.428933980974443,0,0.823240336780769,0.977208552881205,0.710783897485092,2.37585561880029,0.301439377059586,0,0.99972991182057,0,0,0,0.479249710983165,0,1.42636905040718,1.59259437334337,1.84928690295345,0.716243852959582,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.36807447515742,1.00034104211935,0.813795071099207,1.87173775377726,3.7470087647404,1.89242898040722,0.585707074963566,0,0,0,0,0.553107505625109,0.60818530127658,2.34961388955289,0.343143423810856,0,0,0,0.606255142892519,0,0.604780586659361,0.992431231275107,0,0.841980283299221,0.896974044789907,1.02341449813341,0.64341568457443,1.48418066444991,0,0,0.246381468041427,0.519254429183621,0.813472649219715,0.120859449591622,0.40101294060657,0.0920809889358963,1.03333003348146,1.0925470080403,0.917870904715969,0,0.0770153371044148,0,0,0.105551628892876,0,2.2112181685947,1.0795795805107,0,0,0,0.509752546090077,0,0.447749509444357,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0.650060246036521,0,0.48335359146061,1.07834031980251,0.921022048356777,0.413509717453592,0.322260734604821,0.725083469571143,0.596586391912706,0.0890320356467374,0.165284915360978,0.192190067365106,0,0,1.85938219718914,0.62962469366128,2.0911118104818,0.616067160352178,0,0.869932992075073,0.18532421910392,0.572499546967965,0,0,0.190630193923825,0.511795582622668,0,0,0,0.359744915166629,1.37268514868027,0.353437207037059,0.202182481573316,0,1.26377536871694,0.975267478179181,0.487426979262569,0,0.272999822815972,0.282810863907425,1.13008116620243,0.551365343546124,0,0.438450885253763,2.31510213706675,0,0,0,1.97186921772569,0.143411352204052,0,0,0.354761064070598,1.68886108238131,1.31717957183961,0.379473173765715,1.74967360122491,0.384888450902048,0.670302275535787,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0.37428108081644,0,0,0,1.70481688083848,0,0,0,0,0,0.445234820091624,0.49441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| ||
|short_description=p2@NQO1 | |short_description=p2@NQO1 | ||
}} | }} |
Latest revision as of 15:29, 17 September 2015
Short description: | p2@NQO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NQO1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_AB590179, DQ892892, DQ896139_5end |
EntrezGene: | NQO1 |
HGNC: | 2874 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 5.64e-10 | 38 |
endoderm of foregut | 5.64e-10 | 38 |
telencephalic nucleus | 2.07e-09 | 7 |
corpus striatum | 4.00e-08 | 4 |
striatum | 4.00e-08 | 4 |
ventral part of telencephalon | 4.00e-08 | 4 |
future corpus striatum | 4.00e-08 | 4 |
larynx | 4.09e-08 | 9 |
segment of respiratory tract | 5.49e-08 | 47 |
basal ganglion | 4.63e-07 | 9 |
neural nucleus | 4.63e-07 | 9 |
nuclear complex of neuraxis | 4.63e-07 | 9 |
nucleus of brain | 4.63e-07 | 9 |
aggregate regional part of brain | 4.63e-07 | 9 |
collection of basal ganglia | 4.63e-07 | 9 |
cerebral subcortex | 4.63e-07 | 9 |