FFCP PHASE1:Hg19::chr11:3253592..3253608,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116534 | |EntrezGene=116534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30694 | |HGNC=30694 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SM8 | |UniProt=Q86SM8 | ||
|association_with_transcript=7bp_to_ENST00000389832,ENST00000436689,NM_001039165,uc001lxq.3_5end | |association_with_transcript=7bp_to_ENST00000389832,ENST00000436689,NM_001039165,uc001lxq.3_5end | ||
|cluster_id=chr11:3253592..3253608,- | |||
|coexpression_cluster_id=C275 | |||
|description=CAGE_peak_2_at_MRGPRE_5end | |description=CAGE_peak_2_at_MRGPRE_5end | ||
|id=chr11:3253592..3253608,- | |id=chr11:3253592..3253608,- | ||
|ontology_enrichment_celltype=CL:0000764!8.31e-09!2;CL:0000765!8.31e-09!2;CL:0000050!8.31e-09!2;CL:0000038!8.31e-09!2;CL:0000558!8.31e-09!2;CL:0000547!8.31e-09!2;CL:0000549!8.31e-09!2;CL:0000550!8.31e-09!2;CL:0000552!8.31e-09!2 | |ontology_enrichment_celltype=CL:0000764!8.31e-09!2;CL:0000765!8.31e-09!2;CL:0000050!8.31e-09!2;CL:0000038!8.31e-09!2;CL:0000558!8.31e-09!2;CL:0000547!8.31e-09!2;CL:0000549!8.31e-09!2;CL:0000550!8.31e-09!2;CL:0000552!8.31e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.44e-09;6!CL:0002255;1.44e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.44e-09,6;CL:0002255,1.44e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3001;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.44e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.22e-24!115;UBERON:0003075!3.42e-14!86;UBERON:0007284!3.42e-14!86;UBERON:0002346!2.41e-13!90;UBERON:0003076!2.52e-12!15;UBERON:0003057!2.52e-12!15;UBERON:0000200!5.63e-10!6;UBERON:0001049!8.28e-10!57;UBERON:0005068!8.28e-10!57;UBERON:0006241!8.28e-10!57;UBERON:0007135!8.28e-10!57;UBERON:0002298!1.56e-08!8;UBERON:0005743!1.57e-08!86;UBERON:0000073!1.84e-08!94;UBERON:0001016!1.84e-08!94;UBERON:0004733!3.16e-08!12;UBERON:0002028!3.16e-08!12;UBERON:0007277!3.16e-08!12;UBERON:0002360!3.26e-08!2;UBERON:0000094!3.26e-08!2;UBERON:0007645!3.26e-08!2;UBERON:0001017!6.95e-08!82;UBERON:0004732!1.45e-07!13;UBERON:0004121!5.10e-07!169;UBERON:0000924!9.69e-07!173;UBERON:0006601!9.69e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;7.07e-34;6!UBERON:0000988;6.76e-18;3!UBERON:0001896;9.45e-18;3!UBERON:0005290;9.45e-18;3!UBERON:0004733;1.44e-17;12!UBERON:0002028;1.44e-17;12!UBERON:0004732;2.63e-16;13!UBERON:0002680;7.48e-07;9!UBERON:0001895;7.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,5.98e-34,6;UBERON:0000988,6.76e-18,3;UBERON:0001896,8.00e-18,3;UBERON:0005290,8.00e-18,3;UBERON:0010096,8.00e-18,3;UBERON:0004733,1.33e-17,12;UBERON:0002028,1.33e-17,12;UBERON:0007277,1.33e-17,12;UBERON:0004732,2.43e-16,13;UBERON:0003076,2.58e-14,15;UBERON:0003057,2.58e-14,15;UBERON:0002680,7.48e-07,9;UBERON:0001895,7.48e-07,9;UBERON:0010092,7.48e-07,9 | |||
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| ||
|short_description=p2@MRGPRE | |short_description=p2@MRGPRE | ||
}} | }} |
Latest revision as of 15:38, 17 September 2015
Short description: | p2@MRGPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MRGPRE_5end |
Coexpression cluster: | C275_pons_medulla_cerebellum_locus_thalamus_diencephalon_spinal |
Association with transcript: | 7bp_to_ENST00000389832, ENST00000436689, NM_001039165, uc001lxq.3_5end |
EntrezGene: | MRGPRE |
HGNC: | 30694 |
UniProt: | Q86SM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.44e-09 | 6 |
stromal cell of endometrium | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
brainstem | 5.98e-34 | 6 |
pons | 6.76e-18 | 3 |
medulla oblongata | 8.00e-18 | 3 |
myelencephalon | 8.00e-18 | 3 |
future myelencephalon | 8.00e-18 | 3 |
segmental subdivision of hindbrain | 1.33e-17 | 12 |
hindbrain | 1.33e-17 | 12 |
presumptive hindbrain | 1.33e-17 | 12 |
segmental subdivision of nervous system | 2.43e-16 | 13 |
posterior neural tube | 2.58e-14 | 15 |
chordal neural plate | 2.58e-14 | 15 |
regional part of metencephalon | 7.48e-07 | 9 |
metencephalon | 7.48e-07 | 9 |
future metencephalon | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.44e-09 | 6 |