FFCP PHASE1:Hg19::chr19:36630883..36630903,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=826 | |EntrezGene=826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1481 | |HGNC=1481 | ||
|TSSclassifier=strong | |||
|UniProt=P04632 | |UniProt=P04632 | ||
|association_with_transcript=-14bp_to_ENST00000246533,NM_001003962,NM_001749,uc002odi.1,uc002odj.2,uc002odk.2_5end | |association_with_transcript=-14bp_to_ENST00000246533,NM_001003962,NM_001749,uc002odi.1,uc002odj.2,uc002odk.2_5end | ||
|cluster_id=chr19:36630883..36630903,+ | |||
|description=CAGE_peak_3_at_CAPNS1_5end | |description=CAGE_peak_3_at_CAPNS1_5end | ||
|id=chr19:36630883..36630903,+ | |id=chr19:36630883..36630903,+ | ||
|ontology_enrichment_celltype=CL:0000084!7.44e-11!25;CL:0000827!7.44e-11!25;CL:0000791!4.25e-10!18;CL:0000789!4.25e-10!18;CL:0002420!4.25e-10!18;CL:0002419!4.25e-10!18;CL:0000790!4.25e-10!18;CL:0000542!4.11e-09!53;CL:0000051!4.11e-09!53;CL:0000838!6.34e-09!52;CL:0000625!5.04e-07!11 | |ontology_enrichment_celltype=CL:0000084!7.44e-11!25;CL:0000827!7.44e-11!25;CL:0000791!4.25e-10!18;CL:0000789!4.25e-10!18;CL:0002420!4.25e-10!18;CL:0002419!4.25e-10!18;CL:0000790!4.25e-10!18;CL:0000542!4.11e-09!53;CL:0000051!4.11e-09!53;CL:0000838!6.34e-09!52;CL:0000625!5.04e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.87e-11;25!CL:0000791;2.41e-10;18!CL:0000789;2.41e-10;18!CL:0002419;2.41e-10;18!CL:0000625;3.19e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.29e-11,25;CL:0000827,6.29e-11,25;CL:0000791,3.64e-10,18;CL:0000789,3.64e-10,18;CL:0002420,3.64e-10,18;CL:0002419,3.64e-10,18;CL:0000790,3.64e-10,18;CL:0000542,3.86e-09,53;CL:0000051,3.86e-09,53;CL:0000838,5.98e-09,52;CL:0000625,4.56e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.41e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!6.16e-11!32;UBERON:0001893!4.74e-10!34;UBERON:0002020!6.31e-10!34;UBERON:0003528!6.31e-10!34;UBERON:0002619!1.13e-09!22;UBERON:0002791!1.41e-09!33;UBERON:0001950!9.63e-09!20;UBERON:0000956!1.47e-08!25;UBERON:0000203!1.47e-08!25;UBERON:0002346!1.69e-08!90;UBERON:0002780!8.18e-08!41;UBERON:0001890!8.18e-08!41;UBERON:0006240!8.18e-08!41;UBERON:0003080!1.16e-07!42;UBERON:0001049!1.82e-07!57;UBERON:0005068!1.82e-07!57;UBERON:0006241!1.82e-07!57;UBERON:0007135!1.82e-07!57;UBERON:0003075!3.87e-07!86;UBERON:0007284!3.87e-07!86;UBERON:0002616!5.05e-07!59;UBERON:0005743!6.67e-07!86;UBERON:0003056!7.41e-07!61 | |ontology_enrichment_uberon=UBERON:0001869!6.16e-11!32;UBERON:0001893!4.74e-10!34;UBERON:0002020!6.31e-10!34;UBERON:0003528!6.31e-10!34;UBERON:0002619!1.13e-09!22;UBERON:0002791!1.41e-09!33;UBERON:0001950!9.63e-09!20;UBERON:0000956!1.47e-08!25;UBERON:0000203!1.47e-08!25;UBERON:0002346!1.69e-08!90;UBERON:0002780!8.18e-08!41;UBERON:0001890!8.18e-08!41;UBERON:0006240!8.18e-08!41;UBERON:0003080!1.16e-07!42;UBERON:0001049!1.82e-07!57;UBERON:0005068!1.82e-07!57;UBERON:0006241!1.82e-07!57;UBERON:0007135!1.82e-07!57;UBERON:0003075!3.87e-07!86;UBERON:0007284!3.87e-07!86;UBERON:0002616!5.05e-07!59;UBERON:0005743!6.67e-07!86;UBERON:0003056!7.41e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.28e-10;32!UBERON:0002619;2.37e-09;22!UBERON:0003528;6.41e-09;34!UBERON:0002020;6.41e-09;34!UBERON:0002791;7.50e-09;32!UBERON:0001893;1.18e-08;34!UBERON:0001950;2.18e-08;20!UBERON:0000956;2.55e-08;25!UBERON:0000203;2.55e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.25e-11,32;UBERON:0001893,5.97e-10,34;UBERON:0003528,7.95e-10,34;UBERON:0002020,7.95e-10,34;UBERON:0002619,9.75e-10,22;UBERON:0002791,1.62e-09,32;UBERON:0001950,8.45e-09,20;UBERON:0000956,1.30e-08,25;UBERON:0000203,1.30e-08,25;UBERON:0002780,1.19e-07,41;UBERON:0001890,1.19e-07,41;UBERON:0003080,1.19e-07,41;UBERON:0006240,1.19e-07,41;UBERON:0000073,1.54e-07,53;UBERON:0002616,1.54e-07,53;UBERON:0002346,1.71e-07,86;UBERON:0001049,1.85e-07,56;UBERON:0005068,1.85e-07,56;UBERON:0006241,1.85e-07,56;UBERON:0007135,1.85e-07,56;UBERON:0003056,8.67e-07,61 | |||
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| ||
|short_description=p3@CAPNS1 | |short_description=p3@CAPNS1 | ||
}} | }} |
Latest revision as of 15:49, 17 September 2015
Short description: | p3@CAPNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAPNS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000246533, NM_001003962, NM_001749, uc002odi.1, uc002odj.2, uc002odk.2_5end |
EntrezGene: | CAPNS1 |
HGNC: | 1481 |
UniProt: | P04632 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.29e-11 | 25 |
pro-T cell | 6.29e-11 | 25 |
mature alpha-beta T cell | 3.64e-10 | 18 |
alpha-beta T cell | 3.64e-10 | 18 |
immature T cell | 3.64e-10 | 18 |
mature T cell | 3.64e-10 | 18 |
immature alpha-beta T cell | 3.64e-10 | 18 |
lymphocyte | 3.86e-09 | 53 |
common lymphoid progenitor | 3.86e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.98e-09 | 52 |
CD8-positive, alpha-beta T cell | 4.56e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 6.25e-11 | 32 |
telencephalon | 5.97e-10 | 34 |
brain grey matter | 7.95e-10 | 34 |
gray matter | 7.95e-10 | 34 |
regional part of cerebral cortex | 9.75e-10 | 22 |
regional part of telencephalon | 1.62e-09 | 32 |
neocortex | 8.45e-09 | 20 |
cerebral cortex | 1.30e-08 | 25 |
pallium | 1.30e-08 | 25 |
regional part of forebrain | 1.19e-07 | 41 |
forebrain | 1.19e-07 | 41 |
anterior neural tube | 1.19e-07 | 41 |
future forebrain | 1.19e-07 | 41 |
regional part of nervous system | 1.54e-07 | 53 |
regional part of brain | 1.54e-07 | 53 |
neurectoderm | 1.71e-07 | 86 |
neural tube | 1.85e-07 | 56 |
neural rod | 1.85e-07 | 56 |
future spinal cord | 1.85e-07 | 56 |
neural keel | 1.85e-07 | 56 |
pre-chordal neural plate | 8.67e-07 | 61 |