FFCP PHASE1:Hg19::chr12:16500571..16500598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4257 | |EntrezGene=4257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7061 | |HGNC=7061 | ||
|TSSclassifier=strong | |||
|UniProt=P10620,F5H760 | |UniProt=P10620,F5H760 | ||
|association_with_transcript=0bp_to_ENST00000396210,ENST00000534835,ENST00000537878,ENST00000539036,ENST00000539708,ENST00000542256,ENST00000543076,NM_020300,uc001rdg.2,uc009zih.1_5end | |association_with_transcript=0bp_to_ENST00000396210,ENST00000534835,ENST00000537878,ENST00000539036,ENST00000539708,ENST00000542256,ENST00000543076,NM_020300,uc001rdg.2,uc009zih.1_5end | ||
|cluster_id=chr12:16500571..16500598,+ | |||
|coexpression_cluster_id=C892 | |coexpression_cluster_id=C892 | ||
|description=CAGE_peak_1_at_MGST1_5end | |description=CAGE_peak_1_at_MGST1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.57e-13!180;CL:0000136!9.76e-11!15;CL:0000548!1.74e-10!679;CL:0000004!1.74e-10!679;CL:0000255!1.74e-10!679;CL:0000057!2.43e-10!75;CL:0000012!3.07e-10!682;CL:0000680!5.18e-10!57;CL:0000056!5.18e-10!57;CL:0000355!5.18e-10!57;CL:0000187!4.20e-09!54;CL:0000393!1.39e-08!60;CL:0000211!1.39e-08!60;CL:0000183!2.00e-07!59 | |ontology_enrichment_celltype=CL:0000055!4.57e-13!180;CL:0000136!9.76e-11!15;CL:0000548!1.74e-10!679;CL:0000004!1.74e-10!679;CL:0000255!1.74e-10!679;CL:0000057!2.43e-10!75;CL:0000012!3.07e-10!682;CL:0000680!5.18e-10!57;CL:0000056!5.18e-10!57;CL:0000355!5.18e-10!57;CL:0000187!4.20e-09!54;CL:0000393!1.39e-08!60;CL:0000211!1.39e-08!60;CL:0000183!2.00e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.87e-10;13 | |ontology_enrichment_celltype_v019=CL:0000136;4.87e-10;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.64e-11,15;CL:0000057,1.66e-10,76;CL:0000680,3.43e-10,58;CL:0000056,3.43e-10,58;CL:0000355,3.43e-10,58;CL:0000187,2.80e-09,55;CL:0000393,9.32e-09,61;CL:0000211,9.32e-09,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!8.12e-17!216;UBERON:0005256!2.00e-13!143;UBERON:0003104!1.07e-12!238;UBERON:0009142!1.07e-12!238;UBERON:0000475!5.06e-12!365;UBERON:0000481!6.41e-12!347;UBERON:0000490!3.88e-11!138;UBERON:0000914!4.80e-11!83;UBERON:0002329!4.80e-11!83;UBERON:0003077!4.80e-11!83;UBERON:0003059!4.80e-11!83;UBERON:0007282!4.80e-11!83;UBERON:0009618!4.80e-11!83;UBERON:0007285!4.80e-11!83;UBERON:0001048!8.34e-11!168;UBERON:0000486!8.67e-11!82;UBERON:0000468!1.08e-10!659;UBERON:0004290!2.59e-10!70;UBERON:0000119!1.25e-09!312;UBERON:0000483!1.59e-09!309;UBERON:0004119!2.17e-09!169;UBERON:0000925!2.17e-09!169;UBERON:0006595!2.17e-09!169;UBERON:0001013!1.03e-08!14;UBERON:0001134!1.77e-08!61;UBERON:0002036!1.77e-08!61;UBERON:0003082!1.77e-08!61;UBERON:0002385!3.37e-08!63;UBERON:0001015!3.37e-08!63;UBERON:0000383!3.37e-08!63;UBERON:0000922!3.47e-08!612;UBERON:0001007!3.94e-08!155;UBERON:0001555!3.94e-08!155;UBERON:0007026!3.94e-08!155;UBERON:0000926!1.28e-07!448;UBERON:0004120!1.28e-07!448;UBERON:0006603!1.28e-07!448;UBERON:0000923!1.49e-07!604;UBERON:0005291!1.49e-07!604;UBERON:0006598!1.49e-07!604;UBERON:0002532!1.49e-07!604;UBERON:0004921!1.74e-07!129;UBERON:0004185!1.74e-07!129;UBERON:0002050!1.77e-07!605;UBERON:0005423!1.77e-07!605;UBERON:0000466!2.60e-07!126;UBERON:0000480!3.35e-07!626;UBERON:0000077!3.94e-07!130;UBERON:0000467!5.13e-07!625 | |ontology_enrichment_uberon=UBERON:0002100!8.12e-17!216;UBERON:0005256!2.00e-13!143;UBERON:0003104!1.07e-12!238;UBERON:0009142!1.07e-12!238;UBERON:0000475!5.06e-12!365;UBERON:0000481!6.41e-12!347;UBERON:0000490!3.88e-11!138;UBERON:0000914!4.80e-11!83;UBERON:0002329!4.80e-11!83;UBERON:0003077!4.80e-11!83;UBERON:0003059!4.80e-11!83;UBERON:0007282!4.80e-11!83;UBERON:0009618!4.80e-11!83;UBERON:0007285!4.80e-11!83;UBERON:0001048!8.34e-11!168;UBERON:0000486!8.67e-11!82;UBERON:0000468!1.08e-10!659;UBERON:0004290!2.59e-10!70;UBERON:0000119!1.25e-09!312;UBERON:0000483!1.59e-09!309;UBERON:0004119!2.17e-09!169;UBERON:0000925!2.17e-09!169;UBERON:0006595!2.17e-09!169;UBERON:0001013!1.03e-08!14;UBERON:0001134!1.77e-08!61;UBERON:0002036!1.77e-08!61;UBERON:0003082!1.77e-08!61;UBERON:0002385!3.37e-08!63;UBERON:0001015!3.37e-08!63;UBERON:0000383!3.37e-08!63;UBERON:0000922!3.47e-08!612;UBERON:0001007!3.94e-08!155;UBERON:0001555!3.94e-08!155;UBERON:0007026!3.94e-08!155;UBERON:0000926!1.28e-07!448;UBERON:0004120!1.28e-07!448;UBERON:0006603!1.28e-07!448;UBERON:0000923!1.49e-07!604;UBERON:0005291!1.49e-07!604;UBERON:0006598!1.49e-07!604;UBERON:0002532!1.49e-07!604;UBERON:0004921!1.74e-07!129;UBERON:0004185!1.74e-07!129;UBERON:0002050!1.77e-07!605;UBERON:0005423!1.77e-07!605;UBERON:0000466!2.60e-07!126;UBERON:0000480!3.35e-07!626;UBERON:0000077!3.94e-07!130;UBERON:0000467!5.13e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.02e-08;14 | |ontology_enrichment_uberon_v019=UBERON:0001013;1.02e-08;14 | ||
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| ||
|short_description=p1@MGST1 | |short_description=p1@MGST1 | ||
}} | }} |
Latest revision as of 15:52, 17 September 2015
Short description: | p1@MGST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MGST1_5end |
Coexpression cluster: | C892_mature_Adipocyte_liver_Hepatocyte_bile_lung_gall |
Association with transcript: | 0bp_to_ENST00000396210, ENST00000534835, ENST00000537878, ENST00000539036, ENST00000539708, ENST00000542256, ENST00000543076, NM_020300, uc001rdg.2, uc009zih.1_5end |
EntrezGene: | MGST1 |
HGNC: | 7061 |
UniProt: | P10620F5H760 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.64e-11 | 15 |
fibroblast | 1.66e-10 | 76 |
muscle precursor cell | 3.43e-10 | 58 |
myoblast | 3.43e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.43e-10 | 58 |
muscle cell | 2.80e-09 | 55 |
electrically responsive cell | 9.32e-09 | 61 |
electrically active cell | 9.32e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.90e-15 | 199 |
trunk mesenchyme | 1.34e-13 | 122 |
unilaminar epithelium | 4.35e-13 | 148 |
mesenchyme | 7.65e-12 | 160 |
entire embryonic mesenchyme | 7.65e-12 | 160 |
multilaminar epithelium | 5.62e-11 | 83 |
somite | 1.72e-10 | 71 |
presomitic mesoderm | 1.72e-10 | 71 |
presumptive segmental plate | 1.72e-10 | 71 |
dermomyotome | 1.72e-10 | 71 |
trunk paraxial mesoderm | 1.72e-10 | 71 |
paraxial mesoderm | 3.16e-10 | 72 |
presumptive paraxial mesoderm | 3.16e-10 | 72 |
dense mesenchyme tissue | 7.90e-10 | 73 |
cell layer | 9.49e-10 | 309 |
epithelium | 1.20e-09 | 306 |
primordium | 1.40e-09 | 160 |
adipose tissue | 1.02e-08 | 14 |
skeletal muscle tissue | 1.19e-08 | 62 |
striated muscle tissue | 1.19e-08 | 62 |
myotome | 1.19e-08 | 62 |
epithelial vesicle | 1.80e-08 | 78 |
muscle tissue | 2.27e-08 | 64 |
musculature | 2.27e-08 | 64 |
musculature of body | 2.27e-08 | 64 |
endoderm-derived structure | 5.75e-08 | 160 |
endoderm | 5.75e-08 | 160 |
presumptive endoderm | 5.75e-08 | 160 |
embryo | 5.73e-07 | 592 |