FFCP PHASE1:Hg19::chr1:15653374..15653410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114827 | |EntrezGene=114827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29408 | |HGNC=29408 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_ENST00000472131_5end | |association_with_transcript=61bp_to_ENST00000472131_5end | ||
|cluster_id=chr1:15653374..15653410,+ | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_5_at_FHAD1_5end | |description=CAGE_peak_5_at_FHAD1_5end | ||
|id=chr1:15653374..15653410,+ | |id=chr1:15653374..15653410,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.51e-15!75;CL:0000055!9.69e-10!180;CL:0002556!1.18e-09!6;CL:0000188!1.61e-08!9;CL:0002582!2.37e-07!3;CL:0002620!2.67e-07!23 | |ontology_enrichment_celltype=CL:0000057!1.51e-15!75;CL:0000055!9.69e-10!180;CL:0002556!1.18e-09!6;CL:0000188!1.61e-08!9;CL:0002582!2.37e-07!3;CL:0002620!2.67e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.93e-16;1!CL:0000062;4.54e-16;9!CL:0002363;6.93e-09;2!CL:0002575;6.93e-09;2!CL:0000188;7.13e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.93e-16,1;CL:0000062,2.83e-13,11;CL:0000375,2.83e-13,11;CL:0000335,2.83e-13,11;CL:0002363,8.09e-09,2;CL:0000008,8.09e-09,2;CL:0002575,8.74e-09,2;CL:0000188,7.25e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000335;2.89e-13;11!CL:0000008;6.93e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!1.18e-09!6;UBERON:0003672!1.18e-09!6;UBERON:0003102!5.28e-07!95;UBERON:0000078!6.27e-07!18 | |ontology_enrichment_uberon=UBERON:0001758!1.18e-09!6;UBERON:0003672!1.18e-09!6;UBERON:0003102!5.28e-07!95;UBERON:0000078!6.27e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.72e-09;16!UBERON:0002036;2.72e-09;16!UBERON:0003566;6.93e-09;2!UBERON:0000078;6.93e-09;2!UBERON:0001777;6.93e-09;2!UBERON:0002012;6.93e-09;2!UBERON:0008886;6.93e-09;2!UBERON:0001474;2.48e-08;18!UBERON:0010313;5.59e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,6.94e-09,2;UBERON:0007497,6.94e-09,2;UBERON:0003643,6.94e-09,2;UBERON:0003504,6.94e-09,2;UBERON:0003469,6.94e-09,2;UBERON:0003496,6.94e-09,2;UBERON:0002012,6.94e-09,2;UBERON:0008886,6.94e-09,2;UBERON:0007303,6.94e-09,2;UBERON:0002061,6.94e-09,2;UBERON:0005432,6.94e-09,2;UBERON:0004363,6.94e-09,2;UBERON:0003566,8.09e-09,2;UBERON:0001777,8.09e-09,2;UBERON:0010313,5.94e-07,10;UBERON:0002342,5.94e-07,10;UBERON:0005062,5.94e-07,10 | |||
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| ||
|short_description=p5@FHAD1 | |short_description=p5@FHAD1 | ||
}} | }} |
Latest revision as of 16:23, 17 September 2015
Short description: | p5@FHAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FHAD1_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 61bp_to_ENST00000472131_5end |
EntrezGene: | FHAD1 |
HGNC: | 29408 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.93e-16 | 1 |
osteoblast | 2.83e-13 | 11 |
osteoprogenitor cell | 2.83e-13 | 11 |
mesenchyme condensation cell | 2.83e-13 | 11 |
keratocyte | 8.09e-09 | 2 |
migratory cranial neural crest cell | 8.09e-09 | 2 |
central nervous system pericyte | 8.74e-09 | 2 |
cell of skeletal muscle | 7.25e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 6.94e-09 | 2 |
developing epithelial placode | 6.94e-09 | 2 |
respiratory system arterial blood vessel | 6.94e-09 | 2 |
respiratory system blood vessel | 6.94e-09 | 2 |
respiratory system artery | 6.94e-09 | 2 |
head blood vessel | 6.94e-09 | 2 |
pulmonary artery | 6.94e-09 | 2 |
pulmonary vascular system | 6.94e-09 | 2 |
pharyngeal vasculature | 6.94e-09 | 2 |
truncus arteriosus | 6.94e-09 | 2 |
aortic sac | 6.94e-09 | 2 |
pharyngeal arch artery | 6.94e-09 | 2 |
head connective tissue | 8.09e-09 | 2 |
substantia propria of cornea | 8.09e-09 | 2 |
neural crest-derived structure | 5.94e-07 | 10 |
neural crest | 5.94e-07 | 10 |
neural fold | 5.94e-07 | 10 |