FFCP PHASE1:Hg19::chr16:71392619..71392635,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=794 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1435 | |||
|TSSclassifier=strong | |||
|UniProt=P22676 | |||
|association_with_transcript=0bp_to_ENST00000302628,uc002faa.3,uc002fac.3,uc010vme.1_5end | |||
|cluster_id=chr16:71392619..71392635,+ | |||
|coexpression_cluster_id=C2386 | |||
|description=CAGE_peak_1_at_CALB2_5end | |||
|id=chr16:71392619..71392635,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.29e-07;82 | |||
|ontology_enrichment_disease=DOID:2394!8.58e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.80e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.79e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-23!115;UBERON:0001017!6.04e-23!82;UBERON:0001049!1.02e-22!57;UBERON:0005068!1.02e-22!57;UBERON:0006241!1.02e-22!57;UBERON:0007135!1.02e-22!57;UBERON:0005743!1.81e-22!86;UBERON:0000073!1.10e-20!94;UBERON:0001016!1.10e-20!94;UBERON:0002616!4.41e-19!59;UBERON:0000955!5.34e-19!69;UBERON:0006238!5.34e-19!69;UBERON:0003075!1.22e-17!86;UBERON:0007284!1.22e-17!86;UBERON:0000025!2.63e-17!194;UBERON:0003080!1.42e-16!42;UBERON:0002780!5.57e-16!41;UBERON:0001890!5.57e-16!41;UBERON:0006240!5.57e-16!41;UBERON:0000475!1.50e-15!365;UBERON:0004111!1.85e-15!241;UBERON:0002346!2.60e-15!90;UBERON:0002020!9.67e-15!34;UBERON:0003528!9.67e-15!34;UBERON:0004121!1.40e-14!169;UBERON:0001893!2.50e-14!34;UBERON:0001869!5.12e-14!32;UBERON:0002791!8.42e-14!33;UBERON:0000924!3.62e-13!173;UBERON:0006601!3.62e-13!173;UBERON:0000477!6.75e-13!286;UBERON:0000481!8.88e-13!347;UBERON:0002619!1.54e-12!22;UBERON:0000062!1.09e-11!511;UBERON:0003056!1.43e-11!61;UBERON:0001950!1.56e-11!20;UBERON:0000033!3.48e-11!123;UBERON:0000153!4.97e-11!129;UBERON:0007811!4.97e-11!129;UBERON:0000956!1.02e-10!25;UBERON:0000203!1.02e-10!25;UBERON:0000483!1.95e-09!309;UBERON:0000468!6.67e-09!659;UBERON:0000119!8.20e-09!312;UBERON:0000467!1.47e-08!625;UBERON:0000480!2.24e-08!626;UBERON:0001048!7.79e-08!168;UBERON:0002323!1.01e-07!46;UBERON:0000064!1.05e-07!219;UBERON:0000922!1.80e-07!612;UBERON:0003076!2.22e-07!15;UBERON:0003057!2.22e-07!15;UBERON:0004458!2.97e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.68e-15;22!UBERON:0003528;2.12e-14;34!UBERON:0002020;2.12e-14;34!UBERON:0001869;2.37e-14;32!UBERON:0001893;5.56e-14;34!UBERON:0002791;8.60e-14;32!UBERON:0001950;1.26e-13;20!UBERON:0002780;3.35e-13;41!UBERON:0001890;3.35e-13;41!UBERON:0000073;4.89e-13;53!UBERON:0002616;4.89e-13;53!UBERON:0000956;5.96e-12;25!UBERON:0000203;5.96e-12;25!UBERON:0000955;1.72e-09;68!UBERON:0001017;3.29e-09;75!UBERON:0007023;1.36e-08;114!UBERON:0001016;5.36e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.97e-27,114;UBERON:0001049,1.19e-23,56;UBERON:0005068,1.19e-23,56;UBERON:0006241,1.19e-23,56;UBERON:0007135,1.19e-23,56;UBERON:0001017,3.15e-23,81;UBERON:0000073,5.87e-22,53;UBERON:0002616,5.87e-22,53;UBERON:0001016,1.19e-20,89;UBERON:0000955,1.40e-18,68;UBERON:0006238,1.40e-18,68;UBERON:0002780,9.39e-18,41;UBERON:0001890,9.39e-18,41;UBERON:0003080,9.39e-18,41;UBERON:0006240,9.39e-18,41;UBERON:0000025,1.26e-17,192;UBERON:0003528,8.09e-17,34;UBERON:0002020,8.09e-17,34;UBERON:0001893,2.50e-16,34;UBERON:0001869,6.11e-16,32;UBERON:0003075,1.06e-15,82;UBERON:0007284,1.06e-15,82;UBERON:0002791,2.78e-15,32;UBERON:0002619,7.31e-15,22;UBERON:0004111,1.66e-14,240;UBERON:0002346,5.78e-14,86;UBERON:0001950,1.21e-13,20;UBERON:0010314,6.68e-13,132;UBERON:0011216,2.50e-12,223;UBERON:0000956,5.71e-12,25;UBERON:0000203,5.71e-12,25;UBERON:0010371,1.64e-10,104;UBERON:0003056,2.19e-10,61;UBERON:0004121,5.65e-09,171;UBERON:0000924,5.65e-09,171;UBERON:0006601,5.65e-09,171;UBERON:0002323,2.70e-08,46;UBERON:0004458,1.53e-07,49;UBERON:0003076,4.09e-07,15;UBERON:0003057,4.09e-07,15 | |||
|phase1_expression=1.09007027562334,39.8226974437229,7.61153782118244,8.00586386825043,10.7270662662549,0,32.9289841618804,3.79031924056099,19.0665508585882,0.737201809504527,0.697801167972428,0.218441372130172,0,0,0.331397375727916,18.8251041006497,23.5050865929351,22.6396128020086,32.691497518964,0.369363174230364,0.408001382488506,0.313454721478088,0.286235987131057,0.410623275218653,0,0.152826811495903,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,37.5592481434036,25.5725123687061,0,0,0.724232594804119,11.1340032587154,3.89307896242109,0.378139268656271,0.886917589850256,0.614843499851882,18.664518258424,2.5500670180478,6.3033355273353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42306505074684,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.886413581652058,4.50191214764944,0,13.4773985235376,17.9416832045538,0,8.6333641946006,1.8672662123986,0.134710672069688,0.653847612453835,0.756787138224657,0,0,0.312160076830321,0,0,0,0,0,0,0.491337269247072,0,3.56400857184616,1.48360157567134,0,0,0,0,0.277064115484183,2.63386572528503,0.919463387397059,2.25357088359895,0.680593098960126,0.179389635688862,0.213557388818567,0.847727604638247,0.900273288253207,0.309157587715317,0,0.18611685633159,4.89451363499672,3.50773218580315,0.757301322732344,0.828449087780694,0.161646056818812,0.355009592516614,3.62707553619505,0.508681776931463,0.386521706326594,0.272746120590835,0.286804595389004,2.43947412259191,2.25300606146525,4.76395165765025,2.59152637538426,4.79409616663694,2.91981887260664,0,1.28648187638577,1.38134921352481,0,0,0.236613600079688,0.674338760312407,0.241011029883482,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,28.810180793198,2.94017422771084,1.26755034821831,0,1.77236972004421,0.441463099414651,0,0.343135620597051,0.658501712451753,0,0.402115889646523,0,0,0,0,0.695582429850461,0.352226082707465,0,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0.0895585227028483,0.871901815541886,5.75074018747817,994.68707731191,313.276328219058,300.83309564966,189.373618789887,362.442026367137,0.126995788584338,0,0,3.4214489204541,0,0,0,0,0,0,37.23025413824,0,0,25.2641210755627,8.32059495290929,0,0,0.266422179016099,7.72081165753997,0,0,0,6.39705507736582,0,143.485143480363,258.845437204287,498.465334033736,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.179060963239896,5.38008691168931,0,0,0,1.77866236955724,18.219579540067,8.50617694055465,13.7363337574166,9.56908127479745,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.937131319941706,0.300946099727719,20.4666753650386,2.0694614258501,1.99267679560631,3.50301420229236,0.695068915744663,0.391602314925481,0,0,0,0,0.303127571446259,0,0.30239029332968,2.23297027036899,2.30192959932094,2.80660094433074,3.20347873139252,1.53512174720011,7.88184213603677,1.48418066444991,0.154209693802656,1.06537035187876,0.0821271560138091,1.55776328755086,0,0,1.80455823272956,4.9723734025384,1.37777337797528,0,0.262248829918848,13.0847887743149,0.385076685522074,0,2.92278449306521,0.105551628892876,0,0.170093705276516,0,0,0,0,1.78413391131527,5.81753206250107,0.447749509444357,0.219259876645935,0,0.769350375349168,0,0.650756789328606,0.824328093181778,0,0,0.574265537996172,6.50060246036521,3.21367859688319,0,0,0,0.137836572484531,0,0,0.596586391912706,1.4245125703478,0,0,0.127612712494584,0.4046311234222,9.761756535243,6.2962469366128,6.2733354314454,0.308033580176089,0,6.08953094452551,94.7006759621031,1.5743737541619,0,0.316379424718726,1.71567174531442,0.767693373934002,0,0,3.13979456079692,0.359744915166629,0,0.117812402345686,1.01091240786658,1.58510321173008,6.7401352998237,0,0.243713489631284,2.11300293513511,0.136499911407986,0.989838023675989,0,8.82184549673799,52.4116790440563,32.8838163940322,0,0,18.4648443036061,4.3375289733965,0.563391205064483,0.286822704408103,0,24.253631500725,0,0.844430541190656,0,0,0,0.192444225451024,4.02181365321472,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,1.96032172784825,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,2.43410110628385,0,0,31.6267513289891,110.174150812464,0,0,7.10340367016033,0.71623345421307,4.45447021248958,1.22864280839693,86.4908453556679,52.0476840718897,2.00355669041231,0,0.844501632511974,9.76315142430242,17.9584545095246,1.76352923497993,0.306806047506464,0.246169610922139,0.311039587661807,1.88723537409386,1.25314822272926,0,1.87422470710174,0,0,45.5586390664753,24.0269374239195,79.8455192004777,1.04171104434093,0,84.8249503258708,5.68967241427498,2.03402920234213,16.3107500419876,21.3740891409708,0,4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| |||
|short_description=p1@CALB2 | |||
}} |
Latest revision as of 17:29, 17 September 2015
Short description: | p1@CALB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CALB2_5end |
Coexpression cluster: | C2386_mesothelioma_Mast_pons_mature_endometrial_Mesothelial_medulla |
Association with transcript: | 0bp_to_ENST00000302628, uc002faa.3, uc002fac.3, uc010vme.1_5end |
EntrezGene: | CALB2 |
HGNC: | 1435 |
UniProt: | P22676 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.79e-07 | 14 |