FFCP PHASE2:Hg19::chr10:26505329..26505346,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2572 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4093 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4093 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q05329,Q5VZ30 | ||
|association_with_transcript=93bp_to_ENST00000376261,NM_000818,NM_001134366,uc001isp.2,uc001isq.2,uc009xkr.2_5end | |association_with_transcript=93bp_to_ENST00000376261,NM_000818,NM_001134366,uc001isp.2,uc001isq.2,uc009xkr.2_5end | ||
|cluster_id=chr10:26505329..26505346,+ | |cluster_id=chr10:26505329..26505346,+ |
Latest revision as of 17:38, 17 September 2015
Short description: | p6@GAD2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GAD2_5end |
Coexpression cluster: | C3010_caudate_putamen_argyrophil_temporal_parietal_globus_duodenum |
Association with transcript: | 93bp_to_ENST00000376261, NM_000818, NM_001134366, uc001isp.2, uc001isq.2, uc009xkr.2_5end |
EntrezGene: | GAD2 |
HGNC: | 4093 |
UniProt: | Q05329Q5VZ30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@GAD2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.66e-09 | 8 |
neuron | 1.29e-07 | 6 |
neuroblast | 1.29e-07 | 6 |
electrically signaling cell | 1.29e-07 | 6 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.60e-84 | 32 |
regional part of forebrain | 4.31e-82 | 41 |
forebrain | 4.31e-82 | 41 |
anterior neural tube | 4.31e-82 | 41 |
future forebrain | 4.31e-82 | 41 |
telencephalon | 2.45e-79 | 34 |
regional part of telencephalon | 4.25e-78 | 32 |
brain grey matter | 2.72e-73 | 34 |
gray matter | 2.72e-73 | 34 |
central nervous system | 3.88e-73 | 81 |
Showing 1 to 10 of 65 entries