FFCP PHASE1:Hg19::chr19:3786354..3786421,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4145 | |EntrezGene=4145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6906 | |HGNC=6906 | ||
|TSSclassifier=strong | |||
|UniProt=F1T0G6,P42679,Q9NST8 | |UniProt=F1T0G6,P42679,Q9NST8 | ||
|association_with_transcript=0bp_to_ENST00000310132,ENST00000395040,NM_139354,NM_139355,uc002lyt.2,uc002lyu.2,uc010dtq.2_5end | |association_with_transcript=0bp_to_ENST00000310132,ENST00000395040,NM_139354,NM_139355,uc002lyt.2,uc002lyu.2,uc010dtq.2_5end | ||
|cluster_id=chr19:3786354..3786421,- | |||
|description=CAGE_peak_2_at_MATK_5end | |description=CAGE_peak_2_at_MATK_5end | ||
|id=chr19:3786354..3786421,- | |id=chr19:3786354..3786421,- | ||
|ontology_enrichment_celltype=CL:0000791!7.11e-12!18;CL:0000789!7.11e-12!18;CL:0002420!7.11e-12!18;CL:0002419!7.11e-12!18;CL:0000790!7.11e-12!18;CL:0000037!1.22e-11!172;CL:0000566!1.22e-11!172;CL:0002032!2.55e-10!165;CL:0000837!2.55e-10!165;CL:0000084!5.98e-10!25;CL:0000827!5.98e-10!25;CL:0000988!8.07e-10!182;CL:0000625!1.75e-09!11 | |ontology_enrichment_celltype=CL:0000791!7.11e-12!18;CL:0000789!7.11e-12!18;CL:0002420!7.11e-12!18;CL:0002419!7.11e-12!18;CL:0000790!7.11e-12!18;CL:0000037!1.22e-11!172;CL:0000566!1.22e-11!172;CL:0002032!2.55e-10!165;CL:0000837!2.55e-10!165;CL:0000084!5.98e-10!25;CL:0000827!5.98e-10!25;CL:0000988!8.07e-10!182;CL:0000625!1.75e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.01e-13;18!CL:0000789;3.01e-13;18!CL:0002419;3.01e-13;18!CL:0000625;1.81e-12;11!CL:0000084;4.31e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.94e-13,18;CL:0000789,2.94e-13,18;CL:0002420,2.94e-13,18;CL:0002419,2.94e-13,18;CL:0000790,2.94e-13,18;CL:0000625,1.56e-12,11;CL:0000084,5.07e-12,25;CL:0000827,5.07e-12,25;CL:0000037,1.38e-10,168;CL:0002032,1.19e-09,161;CL:0000837,1.19e-09,161;CL:0000988,3.77e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000790;3.01e-13;18 | |||
|ontology_enrichment_disease=DOID:8692!1.05e-09!31;DOID:1240!1.38e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.70e-11;31!DOID:1240;1.07e-09;39!DOID:1036;1.19e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.51e-12,39;DOID:8692,1.63e-11,31;DOID:1036,1.01e-08,8;DOID:2531,1.72e-07,51;DOID:0060083,1.72e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.95e-25!115;UBERON:0001049!5.24e-23!57;UBERON:0005068!5.24e-23!57;UBERON:0006241!5.24e-23!57;UBERON:0007135!5.24e-23!57;UBERON:0002780!7.72e-22!41;UBERON:0001890!7.72e-22!41;UBERON:0006240!7.72e-22!41;UBERON:0003080!6.53e-21!42;UBERON:0002020!1.58e-19!34;UBERON:0003528!1.58e-19!34;UBERON:0001893!1.75e-19!34;UBERON:0001869!3.38e-19!32;UBERON:0002791!1.18e-18!33;UBERON:0002616!1.24e-18!59;UBERON:0002619!3.85e-18!22;UBERON:0000955!8.71e-18!69;UBERON:0006238!8.71e-18!69;UBERON:0001017!9.91e-18!82;UBERON:0005743!2.58e-17!86;UBERON:0001950!1.20e-16!20;UBERON:0003075!9.14e-16!86;UBERON:0007284!9.14e-16!86;UBERON:0002346!3.09e-15!90;UBERON:0000956!9.72e-15!25;UBERON:0000203!9.72e-15!25;UBERON:0000073!5.32e-14!94;UBERON:0001016!5.32e-14!94;UBERON:0003056!1.11e-13!61;UBERON:0000153!3.30e-08!129;UBERON:0007811!3.30e-08!129;UBERON:0000033!3.01e-07!123;UBERON:0001871!3.52e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!3.95e-25!115;UBERON:0001049!5.24e-23!57;UBERON:0005068!5.24e-23!57;UBERON:0006241!5.24e-23!57;UBERON:0007135!5.24e-23!57;UBERON:0002780!7.72e-22!41;UBERON:0001890!7.72e-22!41;UBERON:0006240!7.72e-22!41;UBERON:0003080!6.53e-21!42;UBERON:0002020!1.58e-19!34;UBERON:0003528!1.58e-19!34;UBERON:0001893!1.75e-19!34;UBERON:0001869!3.38e-19!32;UBERON:0002791!1.18e-18!33;UBERON:0002616!1.24e-18!59;UBERON:0002619!3.85e-18!22;UBERON:0000955!8.71e-18!69;UBERON:0006238!8.71e-18!69;UBERON:0001017!9.91e-18!82;UBERON:0005743!2.58e-17!86;UBERON:0001950!1.20e-16!20;UBERON:0003075!9.14e-16!86;UBERON:0007284!9.14e-16!86;UBERON:0002346!3.09e-15!90;UBERON:0000956!9.72e-15!25;UBERON:0000203!9.72e-15!25;UBERON:0000073!5.32e-14!94;UBERON:0001016!5.32e-14!94;UBERON:0003056!1.11e-13!61;UBERON:0000153!3.30e-08!129;UBERON:0007811!3.30e-08!129;UBERON:0000033!3.01e-07!123;UBERON:0001871!3.52e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.35e-23;22!UBERON:0001869;8.35e-23;32!UBERON:0001893;4.05e-22;34!UBERON:0003528;1.78e-21;34!UBERON:0002020;1.78e-21;34!UBERON:0002791;4.83e-21;32!UBERON:0001950;7.38e-21;20!UBERON:0000956;2.87e-19;25!UBERON:0000203;2.87e-19;25!UBERON:0002780;6.93e-19;41!UBERON:0001890;6.93e-19;41!UBERON:0000073;7.54e-14;53!UBERON:0002616;7.54e-14;53!UBERON:0000955;2.03e-10;68!UBERON:0001017;1.30e-09;75!UBERON:0000200;1.65e-08;6!UBERON:0001871;3.50e-08;6!UBERON:0002420;3.09e-07;9!UBERON:0007245;3.09e-07;9!UBERON:0010009;3.09e-07;9!UBERON:0010011;3.09e-07;9!UBERON:0000454;3.09e-07;9!UBERON:0001016;3.79e-07;83!UBERON:0000125;5.19e-07;9!UBERON:0002308;5.19e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,5.12e-26,41;UBERON:0001890,5.12e-26,41;UBERON:0003080,5.12e-26,41;UBERON:0006240,5.12e-26,41;UBERON:0001049,1.35e-25,56;UBERON:0005068,1.35e-25,56;UBERON:0006241,1.35e-25,56;UBERON:0007135,1.35e-25,56;UBERON:0001869,1.71e-25,32;UBERON:0000073,2.49e-25,53;UBERON:0002616,2.49e-25,53;UBERON:0003528,6.48e-25,34;UBERON:0002020,6.48e-25,34;UBERON:0001893,7.46e-25,34;UBERON:0002791,2.90e-23,32;UBERON:0002619,5.54e-23,22;UBERON:0000955,1.68e-21,68;UBERON:0006238,1.68e-21,68;UBERON:0001950,6.47e-21,20;UBERON:0001017,2.39e-20,81;UBERON:0000956,2.56e-19,25;UBERON:0000203,2.56e-19,25;UBERON:0007023,2.53e-17,114;UBERON:0001016,1.03e-16,89;UBERON:0003056,1.11e-15,61;UBERON:0003075,8.67e-15,82;UBERON:0007284,8.67e-15,82;UBERON:0002346,1.89e-13,86;UBERON:0010371,1.71e-09,104;UBERON:0000200,1.68e-08,6;UBERON:0001871,3.44e-08,6;UBERON:0002420,2.50e-07,9;UBERON:0007245,2.50e-07,9;UBERON:0010009,2.50e-07,9;UBERON:0010011,2.50e-07,9;UBERON:0000454,2.50e-07,9;UBERON:0000125,4.85e-07,9;UBERON:0002308,4.85e-07,9;UBERON:0000349,9.90e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,3.93364276848904,6.52509976765262,3.09632246632152,0,0,0,0,0,1.17440175733939,2.21598163412751,3.60980005446255,4.55722828503289,0,1.94336199611388,0.515151135268373,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0,0,0.56738522469114,0,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,0,0,0.574752439954483,0,0,0,1.17447437874188,0,0,0,0.263384084775077,2.16380747125216,1.57204305099666,2.05601498999509,1.00311897234407,0.651844533267181,0.473447805734733,0,2.00538822393312,0.589211814949674,0.221533894583621,0,1.0247305578054,1.1705341280389,9.04408475320219,7.18510046243206,6.95527405764126,0.444859689486181,1.33770414044857,1.04535523804977,3.51258962362455,1.53288197440768,2.74901956386104,3.28925599625354,4.45991580053735,11.7195021694155,9.50452044448374,6.32415500126646,5.88738411310325,4.99722906209383,9.94464458584871,10.6746639599736,12.0964045934839,13.3720097891754,6.95157138637435,0,0,0,0,0,0,0,0,0,0,0.087834785693126,3.33996642519167,0,0.370784442784429,4.86821090482025,4.70150290708022,8.90818335476397,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,1.52054421143703,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,1.24864030732128,0.570471821544449,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0.286804595389004,2.92736894711029,2.12047629314376,1.85910308591229,1.34759371519982,1.26160425437814,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,1.58040879591855,1.71697232418975,1.96973604869918,20.8263795973922,9.95828787334479,0,0,0.141775097242386,0,0,0,0.492663237895943,1.05658120815871,4.14656231081544,1.58531948758658,3.91351543621778,3.6828778689458,3.81988425558278,1.17217447210047,0,0.308482478109971,2.40274446275134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.399891964728228,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,16.1402607350679,13.595122453933,19.8377368870756,17.839682042885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,3.23571301227925,7.36420148843766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,1.28225062558195,0,0,0.824328093181778,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8589409885985,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.03558180854457,0,0,0,0,3.55213326462519,3.82318603571188,3.98753031021914,4.04994018278241,4.11362273086194,0.648473311192717,2.70015718619057,7.13812658664843,1.70918513803957,2.88743956579008,2.20536194382929,0,0,0,1.11598390910176,8.18275422874548,4.5961288831768,5.08016598537319,4.86932910411833,0.280797178113459,2.51058146936511,7.05059530978605,0,4.40158622284169,0,2.42159648629257,2.12923118845163,6.18309620560377,1.53620382154229,0.894704431569664,2.66958626739054,0,0,0,3.78637949866376,5.32915148796512,0,0,1.61158997199083,4.24761826123297,0,0,0,0,0,4.97073823883149,11.8162309784831,0,0,0.422250816255987,0,1.65770349318689,0,0,0.615424027305347,0,0,0,4.09257896181497,0.197286811273867,4.7896618469388,0,11.6319929531426,9.64788220883253,9.98068990005971,4.16684417736373,0,0,0,0,1.18193840883968,0.344743373241465,0.583209226766509,0,4.42870692906919,8.80354001965478,1.52581736317083,0.884634079449797,0.886642856860642,12.2855822406225,0,0.557694977114413,0.230850775511391,0,0.46112780877612,0,0.651884231532048,0,0,0.533034776018635,9.19739683761629,9.57579564009651,0.332423363800313,9.47501774592159,5.88187602953219,9.06236569669551,6.07211944717392,3.33766815858795,0,0,0,0,0.995261931078505,0.265372693510018,0.611030144933625,0,0,0,1.48282492557489,0.802577647298789,5.85661114313348,0,1.56531695145672,1.94224303627274,0,3.62972148145992,2.14250933141343,0.252746318513952,0,0.103688191397247,2.65861549082874,2.31694369112849,1.88359751044335,0,0,0,0.173559738335131,0,0,0,0,11.1269780982448,6.79730648901526,15.1913595548437,0.484945082442097,1.76512253383001,5.19755703795225,0,0,13.2319563547786,1.56441106187842,0,0.85381197895741,0.999048047910651,6.48406877193477,3.6651710773093,0,0,0,1.41416420770077,0,0,0,0,2.40168115483916,1.64286454670392,0,0,7.36084591982081,0.558564802544508,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,6.36183751847443,12.530713362265,0.803765742325096,2.06309154895851,1.24632101408756,0.2249738915515,0,12.5751582282111,2.0126081255956,0.157611414598396,0.314727528809989,0,0,0,0,0,1.27134268827375,0,0,0,0,1.97022049798414,0,0.226624183040251,0,0,4.00777164720807,4.76037366273684,0,0,1.9221734262185,0.314408610199332,2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| ||
|short_description=p2@MATK | |short_description=p2@MATK | ||
}} | }} |
Latest revision as of 18:00, 17 September 2015
Short description: | p2@MATK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MATK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000310132, ENST00000395040, NM_139354, NM_139355, uc002lyt.2, uc002lyu.2, uc010dtq.2_5end |
EntrezGene: | MATK |
HGNC: | 6906 |
UniProt: | F1T0G6P42679Q9NST8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.94e-13 | 18 |
alpha-beta T cell | 2.94e-13 | 18 |
immature T cell | 2.94e-13 | 18 |
mature T cell | 2.94e-13 | 18 |
immature alpha-beta T cell | 2.94e-13 | 18 |
CD8-positive, alpha-beta T cell | 1.56e-12 | 11 |
T cell | 5.07e-12 | 25 |
pro-T cell | 5.07e-12 | 25 |
hematopoietic stem cell | 1.38e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.19e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-09 | 161 |
hematopoietic cell | 3.77e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.51e-12 | 39 |
myeloid leukemia | 1.63e-11 | 31 |
chronic leukemia | 1.01e-08 | 8 |
hematologic cancer | 1.72e-07 | 51 |
immune system cancer | 1.72e-07 | 51 |