FFCP PHASE1:Hg19::chr9:73029219..73029289,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:73029219..73029289,-
|short_description=p2@KLF9
|description=CAGE_peak_2_at_KLF9_5end
|association_with_transcript=250bp_to_ENST00000377126_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=687 | |EntrezGene=687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1123 | |HGNC=1123 | ||
|TSSclassifier=strong | |||
|UniProt=Q13886 | |UniProt=Q13886 | ||
|association_with_transcript=250bp_to_ENST00000377126_5end | |||
|cluster_id=chr9:73029219..73029289,- | |||
|description=CAGE_peak_2_at_KLF9_5end | |||
|id=chr9:73029219..73029289,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.63e-32!115;UBERON:0001049!4.46e-15!57;UBERON:0005068!4.46e-15!57;UBERON:0006241!4.46e-15!57;UBERON:0007135!4.46e-15!57;UBERON:0002616!4.76e-14!59;UBERON:0003075!4.27e-13!86;UBERON:0007284!4.27e-13!86;UBERON:0000955!4.32e-13!69;UBERON:0006238!4.32e-13!69;UBERON:0005743!8.54e-13!86;UBERON:0002346!4.28e-12!90;UBERON:0001017!7.40e-12!82;UBERON:0000073!2.90e-11!94;UBERON:0001016!2.90e-11!94;UBERON:0003080!1.71e-10!42;UBERON:0000062!3.53e-10!511;UBERON:0000033!3.57e-10!123;UBERON:0002780!4.91e-10!41;UBERON:0001890!4.91e-10!41;UBERON:0006240!4.91e-10!41;UBERON:0000153!7.54e-10!129;UBERON:0007811!7.54e-10!129;UBERON:0000475!9.54e-10!365;UBERON:0000481!1.21e-08!347;UBERON:0002020!1.28e-08!34;UBERON:0003528!1.28e-08!34;UBERON:0001893!2.92e-08!34;UBERON:0000468!3.89e-08!659;UBERON:0002791!4.35e-08!33;UBERON:0003056!1.05e-07!61;UBERON:0004121!1.61e-07!169;UBERON:0001869!1.99e-07!32;UBERON:0000924!4.18e-07!173;UBERON:0006601!4.18e-07!173;UBERON:0000477!5.38e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.48e-09;114!UBERON:0000073;5.27e-08;53!UBERON:0002616;5.27e-08;53!UBERON:0002780;1.28e-07;41!UBERON:0001890;1.28e-07;41!UBERON:0003528;1.80e-07;34!UBERON:0002020;1.80e-07;34!UBERON:0001893;2.62e-07;34!UBERON:0002791;3.47e-07;32!UBERON:0001869;6.67e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.71e-32,114;UBERON:0010314,9.28e-19,132;UBERON:0001049,5.02e-15,56;UBERON:0005068,5.02e-15,56;UBERON:0006241,5.02e-15,56;UBERON:0007135,5.02e-15,56;UBERON:0003075,2.08e-14,82;UBERON:0007284,2.08e-14,82;UBERON:0000073,6.61e-14,53;UBERON:0002616,6.61e-14,53;UBERON:0002346,3.41e-13,86;UBERON:0000955,8.92e-13,68;UBERON:0006238,8.92e-13,68;UBERON:0001017,8.23e-12,81;UBERON:0001016,2.72e-10,89;UBERON:0002780,2.78e-10,41;UBERON:0001890,2.78e-10,41;UBERON:0003080,2.78e-10,41;UBERON:0006240,2.78e-10,41;UBERON:0010371,5.21e-10,104;UBERON:0011216,2.20e-09,223;UBERON:0003528,8.29e-09,34;UBERON:0002020,8.29e-09,34;UBERON:0001893,1.95e-08,34;UBERON:0004121,2.45e-08,171;UBERON:0000924,2.45e-08,171;UBERON:0006601,2.45e-08,171;UBERON:0003056,5.08e-08,61;UBERON:0002791,6.55e-08,32;UBERON:0001869,1.43e-07,32;UBERON:0000119,2.36e-07,309;UBERON:0000483,4.09e-07,306;UBERON:0004111,8.42e-07,240 | |||
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| ||
|short_description=p2@KLF9 | |||
}} | }} |
Latest revision as of 18:19, 17 September 2015
Short description: | p2@KLF9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLF9_5end |
Coexpression cluster: | NA |
Association with transcript: | 250bp_to_ENST00000377126_5end |
EntrezGene: | KLF9 |
HGNC: | 1123 |
UniProt: | Q13886 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.71e-32 | 114 |
structure with developmental contribution from neural crest | 9.28e-19 | 132 |
neural tube | 5.02e-15 | 56 |
neural rod | 5.02e-15 | 56 |
future spinal cord | 5.02e-15 | 56 |
neural keel | 5.02e-15 | 56 |
neural plate | 2.08e-14 | 82 |
presumptive neural plate | 2.08e-14 | 82 |
regional part of nervous system | 6.61e-14 | 53 |
regional part of brain | 6.61e-14 | 53 |
neurectoderm | 3.41e-13 | 86 |
brain | 8.92e-13 | 68 |
future brain | 8.92e-13 | 68 |
central nervous system | 8.23e-12 | 81 |
nervous system | 2.72e-10 | 89 |
regional part of forebrain | 2.78e-10 | 41 |
forebrain | 2.78e-10 | 41 |
anterior neural tube | 2.78e-10 | 41 |
future forebrain | 2.78e-10 | 41 |
ecto-epithelium | 5.21e-10 | 104 |
organ system subdivision | 2.20e-09 | 223 |
brain grey matter | 8.29e-09 | 34 |
gray matter | 8.29e-09 | 34 |
telencephalon | 1.95e-08 | 34 |
ectoderm-derived structure | 2.45e-08 | 171 |
ectoderm | 2.45e-08 | 171 |
presumptive ectoderm | 2.45e-08 | 171 |
pre-chordal neural plate | 5.08e-08 | 61 |
regional part of telencephalon | 6.55e-08 | 32 |
cerebral hemisphere | 1.43e-07 | 32 |
cell layer | 2.36e-07 | 309 |
epithelium | 4.09e-07 | 306 |
anatomical conduit | 8.42e-07 | 240 |