FFCP PHASE1:Hg19::chr4:41362615..41362659,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:41362615..41362659,+
|short_description=p4@LIMCH1
|description=CAGE_peak_4_at_LIMCH1_5end
|association_with_transcript=0bp_to_ENST00000509638_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22998 | |EntrezGene=22998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29191 | |HGNC=29191 | ||
|TSSclassifier=strong | |||
|UniProt=D6RJ93 | |UniProt=D6RJ93 | ||
|association_with_transcript=0bp_to_ENST00000509638_5end | |||
|cluster_id=chr4:41362615..41362659,+ | |||
|description=CAGE_peak_4_at_LIMCH1_5end | |||
|id=chr4:41362615..41362659,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.27e-11;82!UBERON:0008947;5.91e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.21e-37!115;UBERON:0001049!2.21e-30!57;UBERON:0005068!2.21e-30!57;UBERON:0006241!2.21e-30!57;UBERON:0007135!2.21e-30!57;UBERON:0005743!4.07e-30!86;UBERON:0000073!2.73e-29!94;UBERON:0001016!2.73e-29!94;UBERON:0001017!1.87e-28!82;UBERON:0000477!1.24e-25!286;UBERON:0002780!1.41e-25!41;UBERON:0001890!1.41e-25!41;UBERON:0006240!1.41e-25!41;UBERON:0003075!2.13e-25!86;UBERON:0007284!2.13e-25!86;UBERON:0004111!3.00e-25!241;UBERON:0000955!6.03e-25!69;UBERON:0006238!6.03e-25!69;UBERON:0000025!1.19e-24!194;UBERON:0002346!1.51e-24!90;UBERON:0003080!2.18e-24!42;UBERON:0002616!8.29e-24!59;UBERON:0001893!2.20e-22!34;UBERON:0002020!3.41e-22!34;UBERON:0003528!3.41e-22!34;UBERON:0002791!1.13e-21!33;UBERON:0001869!6.13e-21!32;UBERON:0003056!2.71e-18!61;UBERON:0000956!2.51e-16!25;UBERON:0000203!2.51e-16!25;UBERON:0002619!5.33e-16!22;UBERON:0000475!1.66e-15!365;UBERON:0004121!4.15e-15!169;UBERON:0000153!6.19e-15!129;UBERON:0007811!6.19e-15!129;UBERON:0000924!6.43e-15!173;UBERON:0006601!6.43e-15!173;UBERON:0000033!7.78e-15!123;UBERON:0001950!1.16e-14!20;UBERON:0000483!1.37e-14!309;UBERON:0000481!5.30e-14!347;UBERON:0000119!7.18e-14!312;UBERON:0000468!7.75e-14!659;UBERON:0000064!2.15e-13!219;UBERON:0000467!1.00e-11!625;UBERON:0000480!1.54e-11!626;UBERON:0000062!3.72e-09!511;UBERON:0000922!3.25e-08!612;UBERON:0002420!1.74e-07!9;UBERON:0007245!1.74e-07!9;UBERON:0010009!1.74e-07!9;UBERON:0010011!1.74e-07!9;UBERON:0000454!1.74e-07!9;UBERON:0002308!2.47e-07!9;UBERON:0000125!2.47e-07!9;UBERON:0003076!3.09e-07!15;UBERON:0003057!3.09e-07!15;UBERON:0002050!3.27e-07!605;UBERON:0005423!3.27e-07!605;UBERON:0000923!4.10e-07!604;UBERON:0005291!4.10e-07!604;UBERON:0006598!4.10e-07!604;UBERON:0002532!4.10e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.07e-24;34!UBERON:0003528;8.13e-24;34!UBERON:0002020;8.13e-24;34!UBERON:0001869;1.01e-23;32!UBERON:0002791;1.07e-23;32!UBERON:0002780;3.71e-23;41!UBERON:0001890;3.71e-23;41!UBERON:0000073;1.32e-20;53!UBERON:0002616;1.32e-20;53!UBERON:0000956;3.00e-20;25!UBERON:0000203;3.00e-20;25!UBERON:0002619;9.04e-20;22!UBERON:0001950;4.47e-18;20!UBERON:0000955;1.30e-14;68!UBERON:0001017;3.34e-13;75!UBERON:0001016;9.04e-13;83!UBERON:0007023;9.60e-12;114!UBERON:0002420;4.98e-09;9!UBERON:0007245;4.98e-09;9!UBERON:0010009;4.98e-09;9!UBERON:0010011;4.98e-09;9!UBERON:0000454;4.98e-09;9!UBERON:0000125;7.35e-09;9!UBERON:0002308;7.35e-09;9!UBERON:0009663;2.56e-07;7!UBERON:0001871;7.70e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.42e-41,114;UBERON:0001049,1.04e-37,56;UBERON:0005068,1.04e-37,56;UBERON:0006241,1.04e-37,56;UBERON:0007135,1.04e-37,56;UBERON:0000073,1.15e-35,53;UBERON:0002616,1.15e-35,53;UBERON:0001017,4.16e-33,81;UBERON:0002780,5.44e-32,41;UBERON:0001890,5.44e-32,41;UBERON:0003080,5.44e-32,41;UBERON:0006240,5.44e-32,41;UBERON:0001016,1.39e-31,89;UBERON:0000955,3.07e-30,68;UBERON:0006238,3.07e-30,68;UBERON:0003075,1.39e-29,82;UBERON:0007284,1.39e-29,82;UBERON:0001893,6.12e-28,34;UBERON:0002346,6.72e-28,86;UBERON:0003528,1.07e-27,34;UBERON:0002020,1.07e-27,34;UBERON:0001869,4.17e-26,32;UBERON:0002791,4.21e-26,32;UBERON:0000025,1.37e-24,192;UBERON:0011216,3.23e-24,223;UBERON:0003056,4.47e-23,61;UBERON:0004111,1.01e-22,240;UBERON:0000956,2.94e-20,25;UBERON:0000203,2.94e-20,25;UBERON:0010314,3.70e-20,132;UBERON:0002619,7.66e-20,22;UBERON:0010371,1.30e-19,104;UBERON:0001950,3.80e-18,20;UBERON:0004121,1.96e-14,171;UBERON:0000924,1.96e-14,171;UBERON:0006601,1.96e-14,171;UBERON:0000483,1.94e-12,306;UBERON:0000119,5.94e-12,309;UBERON:0002420,4.59e-09,9;UBERON:0007245,4.59e-09,9;UBERON:0010009,4.59e-09,9;UBERON:0010011,4.59e-09,9;UBERON:0000454,4.59e-09,9;UBERON:0000125,7.13e-09,9;UBERON:0002308,7.13e-09,9;UBERON:0009663,2.49e-07,7;UBERON:0003076,2.68e-07,15;UBERON:0003057,2.68e-07,15;UBERON:0001871,6.85e-07,6 | |||
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|short_description=p4@LIMCH1 | |||
}} | }} |
Latest revision as of 19:34, 17 September 2015
Short description: | p4@LIMCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LIMCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000509638_5end |
EntrezGene: | LIMCH1 |
HGNC: | 29191 |
UniProt: | D6RJ93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data