FFCP PHASE1:Hg19::chr4:41362776..41362792,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:41362776..41362792,+ to FFCP PHASE1:Hg19::chr4:41362776..41362792,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22998 | |EntrezGene=22998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29191 | |HGNC=29191 | ||
|TSSclassifier=strong | |||
|UniProt=E9PHM7 | |UniProt=E9PHM7 | ||
|association_with_transcript=-9bp_to_ENST00000508501,ENST00000512946_5end | |||
|cluster_id=chr4:41362776..41362792,+ | |||
|coexpression_cluster_id=C4413 | |||
|description=CAGE_peak_2_at_LIMCH1_5end | |||
|id=chr4:41362776..41362792,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.04e-10;82!UBERON:0002532;1.99e-07;206!UBERON:0010316;1.99e-07;206 | |||
|ontology_enrichment_disease=DOID:0050687!1.91e-08!143;DOID:305!3.32e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.81e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-32!115;UBERON:0001049!2.22e-26!57;UBERON:0005068!2.22e-26!57;UBERON:0006241!2.22e-26!57;UBERON:0007135!2.22e-26!57;UBERON:0004111!4.00e-25!241;UBERON:0000025!3.36e-24!194;UBERON:0000477!3.69e-24!286;UBERON:0005743!1.60e-23!86;UBERON:0000073!3.74e-23!94;UBERON:0001016!3.74e-23!94;UBERON:0003075!4.38e-23!86;UBERON:0007284!4.38e-23!86;UBERON:0002346!1.74e-22!90;UBERON:0001017!2.60e-22!82;UBERON:0000955!9.52e-22!69;UBERON:0006238!9.52e-22!69;UBERON:0003080!1.20e-21!42;UBERON:0002780!2.64e-21!41;UBERON:0001890!2.64e-21!41;UBERON:0006240!2.64e-21!41;UBERON:0002616!3.41e-20!59;UBERON:0000475!1.05e-19!365;UBERON:0002020!7.29e-19!34;UBERON:0003528!7.29e-19!34;UBERON:0001893!8.97e-19!34;UBERON:0002791!2.97e-18!33;UBERON:0000483!1.23e-17!309;UBERON:0001869!1.43e-17!32;UBERON:0000481!2.43e-17!347;UBERON:0003056!9.59e-17!61;UBERON:0000119!1.15e-16!312;UBERON:0000468!3.27e-15!659;UBERON:0000064!8.72e-15!219;UBERON:0000956!9.15e-14!25;UBERON:0000203!9.15e-14!25;UBERON:0000033!3.61e-13!123;UBERON:0000153!4.29e-13!129;UBERON:0007811!4.29e-13!129;UBERON:0002619!1.06e-12!22;UBERON:0000467!1.80e-12!625;UBERON:0004121!2.21e-12!169;UBERON:0000924!2.52e-12!173;UBERON:0006601!2.52e-12!173;UBERON:0000480!3.12e-12!626;UBERON:0001950!1.15e-11!20;UBERON:0000062!1.84e-09!511;UBERON:0000922!8.74e-09!612;UBERON:0002050!2.77e-08!605;UBERON:0005423!2.77e-08!605;UBERON:0000923!4.20e-08!604;UBERON:0005291!4.20e-08!604;UBERON:0006598!4.20e-08!604;UBERON:0002532!4.20e-08!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.91e-18;34!UBERON:0002020;5.91e-18;34!UBERON:0001893;6.34e-18;34!UBERON:0002791;1.05e-17;32!UBERON:0001869;1.25e-17;32!UBERON:0002780;3.16e-17;41!UBERON:0001890;3.16e-17;41!UBERON:0000073;2.16e-15;53!UBERON:0002616;2.16e-15;53!UBERON:0000956;3.34e-15;25!UBERON:0000203;3.34e-15;25!UBERON:0002619;5.60e-14;22!UBERON:0001950;7.56e-13;20!UBERON:0000955;3.55e-11;68!UBERON:0001017;1.05e-10;75!UBERON:0001016;2.37e-10;83!UBERON:0007023;2.61e-10;114!UBERON:0000125;3.34e-07;9!UBERON:0002308;3.34e-07;9!UBERON:0002420;3.84e-07;9!UBERON:0007245;3.84e-07;9!UBERON:0010009;3.84e-07;9!UBERON:0010011;3.84e-07;9!UBERON:0000454;3.84e-07;9 | |||
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| ||
|short_description=p2@LIMCH1 | |||
}} | }} |
Latest revision as of 19:36, 17 September 2015
Short description: | p2@LIMCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LIMCH1_5end |
Coexpression cluster: | C4413_Preadipocyte_optic_globus_thalamus_somatostatinoma_spinal_substantia |
Association with transcript: | -9bp_to_ENST00000508501, ENST00000512946_5end |
EntrezGene: | LIMCH1 |
HGNC: | 29191 |
UniProt: | E9PHM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.81e-07 | 143 |