FFCP PHASE1:Hg19::chr4:41540295..41540302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22998 | |EntrezGene=22998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29191 | |HGNC=29191 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=104bp_to_ENST00000511496,uc003gvz.3,uc003gwa.3_5end | |association_with_transcript=104bp_to_ENST00000511496,uc003gvz.3,uc003gwa.3_5end | ||
|cluster_id=chr4:41540295..41540302,+ | |||
|coexpression_cluster_id=C2793 | |||
|description=CAGE_peak_16_at_LIMCH1_5end | |description=CAGE_peak_16_at_LIMCH1_5end | ||
|id=chr4:41540295..41540302,+ | |id=chr4:41540295..41540302,+ | ||
|ontology_enrichment_celltype=CL:0000077!5.04e-08!19 | |ontology_enrichment_celltype=CL:0000077!5.04e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0002580;5.17e-10;3!CL:0002616;3.96e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,2.84e-10,3;CL:0002616,2.50e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0004872;8.87e-10;7!UBERON:0000358;1.69e-08;1!UBERON:0010227;1.69e-08;1!UBERON:0010226;3.96e-08;1!UBERON:0004140;3.96e-08;1!UBERON:0005062;1.01e-07;4!UBERON:0007284;1.01e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.87e-18!115;UBERON:0001737!2.97e-14!9;UBERON:0001557!4.35e-12!19;UBERON:0008947!6.12e-08!38;UBERON:0003258!6.12e-08!38;UBERON:0000065!9.61e-08!53 | |ontology_enrichment_uberon=UBERON:0007023!3.87e-18!115;UBERON:0001737!2.97e-14!9;UBERON:0001557!4.35e-12!19;UBERON:0008947!6.12e-08!38;UBERON:0003258!6.12e-08!38;UBERON:0000065!9.61e-08!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.79e-12;9!UBERON:0001557;2.79e-12;9!UBERON:0002106;8.73e-11;3!UBERON:0001723;2.97e-10;3!UBERON:0004151;2.97e-10;3!UBERON:0001033;2.97e-10;3!UBERON:0003978;5.17e-10;3!UBERON:0000946;5.17e-10;3!UBERON:0007100;2.29e-09;25!UBERON:0001389;1.22e-08;1!UBERON:0000026;1.22e-08;1!UBERON:0008784;1.22e-08;1!UBERON:0006058;1.22e-08;1!UBERON:0003663;1.22e-08;1!UBERON:0004256;1.22e-08;1!UBERON:0004708;1.22e-08;1!UBERON:0002101;1.22e-08;1!UBERON:0004709;1.22e-08;1!UBERON:0002529;1.22e-08;1!UBERON:0010538;1.22e-08;1!UBERON:0003661;1.22e-08;1!UBERON:0010890;1.22e-08;1!UBERON:0002471;1.22e-08;1!UBERON:0001383;1.22e-08;1!UBERON:0010758;1.22e-08;1!UBERON:0010707;1.22e-08;1!UBERON:0000978;1.22e-08;1!UBERON:0002103;1.22e-08;1!UBERON:0001665;1.22e-08;1!UBERON:0003823;1.22e-08;1!UBERON:0000154;1.22e-08;1!UBERON:0010709;1.22e-08;1!UBERON:0002079;1.69e-08;1!UBERON:0002084;3.96e-08;1!UBERON:0002135;3.96e-08;1!UBERON:0002146;3.96e-08;1!UBERON:0002082;3.96e-08;1!UBERON:0005623;3.96e-08;1!UBERON:0000948;1.25e-07;22!UBERON:0004177;8.57e-07;5!UBERON:0005057;8.57e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,2.26e-12,19;UBERON:0001737,3.55e-12,9;UBERON:0002106,8.75e-11,3;UBERON:0004854,8.75e-11,3;UBERON:0009034,8.75e-11,3;UBERON:0002095,8.75e-11,3;UBERON:0004782,8.75e-11,3;UBERON:0003281,8.75e-11,3;UBERON:0009664,8.75e-11,3;UBERON:0002296,8.75e-11,3;UBERON:0005602,8.75e-11,3;UBERON:0001179,8.75e-11,3;UBERON:0006293,8.75e-11,3;UBERON:0004151,2.25e-10,3;UBERON:0001723,3.58e-10,3;UBERON:0001033,3.58e-10,3;UBERON:0010056,3.58e-10,3;UBERON:0003978,5.94e-10,3;UBERON:0009751,5.94e-10,3;UBERON:0000946,5.94e-10,3;UBERON:0002523,5.94e-10,3;UBERON:0005983,5.94e-10,3;UBERON:0002165,5.94e-10,3;UBERON:0002062,5.94e-10,3;UBERON:0007280,5.94e-10,3;UBERON:0005418,1.13e-08,1;UBERON:0001389,1.13e-08,1;UBERON:0000026,1.13e-08,1;UBERON:0008784,1.13e-08,1;UBERON:0006058,1.13e-08,1;UBERON:0003663,1.13e-08,1;UBERON:0004256,1.13e-08,1;UBERON:0004708,1.13e-08,1;UBERON:0002101,1.13e-08,1;UBERON:0004709,1.13e-08,1;UBERON:0002529,1.13e-08,1;UBERON:0010538,1.13e-08,1;UBERON:0003661,1.13e-08,1;UBERON:0010890,1.13e-08,1;UBERON:0002471,1.13e-08,1;UBERON:0001383,1.13e-08,1;UBERON:0004357,1.13e-08,1;UBERON:0004347,1.13e-08,1;UBERON:0005420,1.13e-08,1;UBERON:0005732,1.13e-08,1;UBERON:0010758,1.13e-08,1;UBERON:0010707,1.13e-08,1;UBERON:0000978,1.13e-08,1;UBERON:0002103,1.13e-08,1;UBERON:0001665,1.13e-08,1;UBERON:0003823,1.13e-08,1;UBERON:0000154,1.13e-08,1;UBERON:0010709,1.13e-08,1;UBERON:0005733,1.13e-08,1;UBERON:0005730,1.13e-08,1;UBERON:0007100,1.24e-08,27;UBERON:0002079,2.02e-08,1;UBERON:0002084,2.17e-08,1;UBERON:0002082,2.17e-08,1;UBERON:0010226,2.17e-08,1;UBERON:0002146,3.33e-08,1;UBERON:0005623,3.33e-08,1;UBERON:0002135,5.82e-08,1;UBERON:0000948,5.48e-07,24;UBERON:0005498,5.48e-07,24;UBERON:0004140,5.48e-07,24;UBERON:0009881,5.48e-07,24;UBERON:0004141,5.48e-07,24;UBERON:0003084,5.48e-07,24;UBERON:0007005,5.48e-07,24;UBERON:0004139,5.48e-07,24;UBERON:0004291,5.48e-07,24 | |||
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| ||
|short_description=p16@LIMCH1 | |short_description=p16@LIMCH1 | ||
}} | }} |
Latest revision as of 19:40, 17 September 2015
Short description: | p16@LIMCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_LIMCH1_5end |
Coexpression cluster: | C2793_spleen_left_giant_lung_tongue_heart_mesothelioma |
Association with transcript: | 104bp_to_ENST00000511496, uc003gvz.3, uc003gwa.3_5end |
EntrezGene: | LIMCH1 |
HGNC: | 29191 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 2.84e-10 | 3 |
perirenal adipocyte cell | 2.50e-08 | 1 |