FFCP PHASE1:Hg19::chr19:38924316..38924346,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:38924316..38924346,+
|short_description=p1@RYR1
|description=CAGE_peak_1_at_RYR1_5end
|association_with_transcript=0bp_to_ENST00000355481,ENST00000359596,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6261 | |EntrezGene=6261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10483 | |HGNC=10483 | ||
|TSSclassifier=strong | |||
|UniProt=P21817 | |UniProt=P21817 | ||
|association_with_transcript=0bp_to_ENST00000355481,ENST00000359596,ENST00000360985,NM_000540,NM_001042723,uc002oit.2,uc002oiu.2_5end | |||
|cluster_id=chr19:38924316..38924346,+ | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_1_at_RYR1_5end | |||
|id=chr19:38924316..38924346,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.01e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.02e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.01e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.06e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.23e-56!115;UBERON:0001049!7.84e-33!57;UBERON:0005068!7.84e-33!57;UBERON:0006241!7.84e-33!57;UBERON:0007135!7.84e-33!57;UBERON:0002616!2.97e-27!59;UBERON:0001017!5.11e-27!82;UBERON:0005743!6.97e-26!86;UBERON:0003080!1.61e-24!42;UBERON:0002780!7.08e-24!41;UBERON:0001890!7.08e-24!41;UBERON:0006240!7.08e-24!41;UBERON:0000073!9.76e-24!94;UBERON:0001016!9.76e-24!94;UBERON:0000955!1.93e-23!69;UBERON:0006238!1.93e-23!69;UBERON:0003075!7.54e-21!86;UBERON:0007284!7.54e-21!86;UBERON:0002020!2.75e-20!34;UBERON:0003528!2.75e-20!34;UBERON:0001893!2.88e-20!34;UBERON:0002346!9.26e-20!90;UBERON:0002791!1.53e-19!33;UBERON:0001869!1.47e-18!32;UBERON:0002619!1.67e-16!22;UBERON:0001950!4.89e-15!20;UBERON:0000956!1.35e-13!25;UBERON:0000203!1.35e-13!25;UBERON:0003056!1.85e-13!61;UBERON:0000153!2.54e-12!129;UBERON:0007811!2.54e-12!129;UBERON:0000033!3.32e-11!123;UBERON:0004121!8.44e-11!169;UBERON:0000924!1.85e-10!173;UBERON:0006601!1.85e-10!173;UBERON:0003076!2.33e-09!15;UBERON:0003057!2.33e-09!15;UBERON:0002308!2.11e-08!9;UBERON:0002420!2.11e-08!9;UBERON:0000125!2.11e-08!9;UBERON:0007245!2.11e-08!9;UBERON:0010009!2.11e-08!9;UBERON:0010011!2.11e-08!9;UBERON:0000454!2.11e-08!9;UBERON:0002298!6.00e-08!8;UBERON:0004732!1.09e-07!13;UBERON:0000922!1.88e-07!612;UBERON:0004733!4.41e-07!12;UBERON:0002028!4.41e-07!12;UBERON:0007277!4.41e-07!12;UBERON:0009663!9.80e-07!7;UBERON:0001871!9.97e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.81e-21;34!UBERON:0003528;4.11e-21;34!UBERON:0002020;4.11e-21;34!UBERON:0002780;5.41e-21;41!UBERON:0001890;5.41e-21;41!UBERON:0000073;1.66e-20;53!UBERON:0002616;1.66e-20;53!UBERON:0002791;1.88e-20;32!UBERON:0001869;2.64e-20;32!UBERON:0002619;2.23e-18;22!UBERON:0001950;2.76e-16;20!UBERON:0007023;1.01e-15;114!UBERON:0000956;1.48e-15;25!UBERON:0000203;1.48e-15;25!UBERON:0000955;1.14e-12;68!UBERON:0001017;1.36e-12;75!UBERON:0000125;1.02e-11;9!UBERON:0002308;1.02e-11;9!UBERON:0002420;1.13e-11;9!UBERON:0007245;1.13e-11;9!UBERON:0010009;1.13e-11;9!UBERON:0010011;1.13e-11;9!UBERON:0000454;1.13e-11;9!UBERON:0001134;3.03e-11;16!UBERON:0002036;3.03e-11;16!UBERON:0001016;1.97e-10;83!UBERON:0004732;8.87e-10;13!UBERON:0009663;3.07e-09;7!UBERON:0002298;6.27e-09;6!UBERON:0004733;6.32e-09;12!UBERON:0002028;6.32e-09;12!UBERON:0000349;2.65e-07;5!UBERON:0000200;3.75e-07;6!UBERON:0002784;5.44e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.80e-62,114;UBERON:0001049,1.01e-40,56;UBERON:0005068,1.01e-40,56;UBERON:0006241,1.01e-40,56;UBERON:0007135,1.01e-40,56;UBERON:0000073,3.24e-37,53;UBERON:0002616,3.24e-37,53;UBERON:0001017,1.67e-33,81;UBERON:0001016,7.76e-30,89;UBERON:0002780,1.97e-29,41;UBERON:0001890,1.97e-29,41;UBERON:0003080,1.97e-29,41;UBERON:0006240,1.97e-29,41;UBERON:0000955,1.98e-28,68;UBERON:0006238,1.98e-28,68;UBERON:0003075,2.49e-28,82;UBERON:0007284,2.49e-28,82;UBERON:0002346,2.79e-26,86;UBERON:0003528,3.28e-25,34;UBERON:0002020,3.28e-25,34;UBERON:0001893,3.49e-25,34;UBERON:0002791,7.31e-23,32;UBERON:0001869,9.75e-23,32;UBERON:0010371,2.54e-20,104;UBERON:0003056,7.85e-19,61;UBERON:0002619,1.78e-18,22;UBERON:0010314,3.14e-18,132;UBERON:0001950,2.27e-16,20;UBERON:0004121,4.24e-16,171;UBERON:0000924,4.24e-16,171;UBERON:0006601,4.24e-16,171;UBERON:0000956,1.22e-15,25;UBERON:0000203,1.22e-15,25;UBERON:0011216,3.97e-13,223;UBERON:0003076,3.43e-12,15;UBERON:0003057,3.43e-12,15;UBERON:0002420,1.07e-11,9;UBERON:0000125,1.07e-11,9;UBERON:0007245,1.07e-11,9;UBERON:0002308,1.07e-11,9;UBERON:0010009,1.07e-11,9;UBERON:0010011,1.07e-11,9;UBERON:0000454,1.07e-11,9;UBERON:0004732,8.99e-10,13;UBERON:0009663,3.08e-09,7;UBERON:0002298,6.70e-09,6;UBERON:0004733,6.93e-09,12;UBERON:0002028,6.93e-09,12;UBERON:0007277,6.93e-09,12;UBERON:0000349,2.44e-07,5;UBERON:0000200,2.59e-07,6;UBERON:0002784,5.29e-07,4;UBERON:0000922,5.52e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0.383829398097213,1.85779347979291,0,0,0,0.154934401160603,0,0,0,1.00272223735071,0.868043482863407,3.13481663935894,1.29557466407592,2.06060454107349,1.01778767145695,1.51150377475524,0.485168122375632,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0.941211697713023,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0.659702600373432,0.598390972864896,0.852449501065388,0.290209238628584,0,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,4.23779651843358,0.368277635987565,0.316462387440884,1.05627643155971,1.70083439972035,1.46761051855863,0.561643155732475,0.450530678524519,0.32145117339416,0.570025487482497,0.99458338599545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,4.68122187093899,0.32592226663359,0.473447805734733,0,6.01616467179937,1.47302953737419,1.10766947291811,0.812411591295047,14.0900451698243,16.3874777925447,0.164437904603676,0,0,0,0,0,1.69964014046349,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8565817968474,16.0361019668997,8.94693360095292,6.53064646596834,3.02785021050754,4.74470566798579,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,8.82052268313252,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0.985326475791887,1.67292024625129,1.65862492432618,4.61183850934277,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,2.60606352001643,2.05476322550383,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,22.6474659715165,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,12.9538762511443,0.154048617114644,3.68408819342711,5.78913604435028,0.429680979473094,2.46528379654188,6.39199705620757,78.2591593334821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,32.3783076190886,0,0.445773537109913,0,0,4.45447021248958,0,5.96488588659779,13.5042639754092,0,0,0.211125408127993,1.9924798825107,1.10513566212459,0,0,2.09244169283818,0,0,0,0,0.789147245095469,0,0,5.81599647657131,4.36010061360701,0,0,0,2.89999830173917,0,0,0,0,0,0,4.42870692906919,3.85908603601305,9.15490417902499,8.29344449484185,9.16197618755997,1.97446857438575,0,0,1.07730361905316,0,0,0,2.06430006651815,0,0,0,0,0.156980256395025,0,7.21906113974978,5.68581349521445,6.37722030508202,0,0.158936578980379,0,0,0.141353071433941,0,2.98578579323551,1.23840590304675,0.611030144933625,0,0,0,15.5022605855557,247.996493015326,7.96499115466153,0,0,0,0.789168805698781,1.20990716048664,0.61214552326098,4.48624715362264,0,0,0,0,0,0,0,0,0,0,0,39.8376803591829,0,0,0,0,13.3844842754019,0,9.49119111278236,0,0,6.96418755514666,0.782205530939212,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,4.20294202096853,10.8155249324675,0,0,4.20619766846903,2.23425921017803,3.20824593616357,0.717873024576814,0.599037001496973,0,0,0.604651252380536,0,0,0,0,0,0,0,2.38568906942791,10.896272488926,13.5032644710616,12.1034704205566,12.0477698028464,0,0,8.20119014883333,0,0.236417121897595,1.10154635083496,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.339936274560377,0.293104467356165,0,7.23984555624683,10.1819103341871,0,0,0.427149650270779,0.943225830597996,0,1.48849806543585,0,0,0,0,0,0.306345576763462,0,0,1.77213635993397,1.70836770862748,4.00610978260799,3.44045517414043,9.20711127755874,11.177352529449,0.553394539744923,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,4.70078682915885,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,18.6623178009892,0,0,0.157265941855896,0.109209638192014,0.33946505990805,0,0,0,0,0,0,0,0,5.7164010335849,1.41696576325585,6.8642559394575,2.46139637088906,0.756215088665154,6.08583821685117,6.13607453401034,2.85538840518309,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,4.9977812617612,4.68646859168308,5.1671699125296,5.32692805628817,0.546974809018219,7.67560873600055,187.567825431153,0,0,77.6767662023516,107.274507387805,0,0.227662191351298,1.50794029276486,0.115233987555779,0,10.2634296795016,4.73563969652513,0,0,2.43328587836593,4.71346769748006,0.560544326627578,0.913158720509496,0,0,3.71678029718613,0,0,59.4595291274822,0,0,0,0,2.15113679410139,0,0,0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.423387050190929,0,0,0,0,0,0,747.780306952018,982.791050034853,242.401216149684,40.7997234169677,0,0,0,0,2.41869136839944,0,0.926089897295336,0.874238242015829,0,1.22574160876953,0,6.28187094767825,8.91139200981258,6.339835913751,0,0.375935671919414,2.06265241515447,0,0,0,0,0.730336388246517,18.3491713361816,8.88705415538998,0,7.54705541119153,0.436350690340377,1.0580536810308,0,0,0,0.126166424835079,2.4038425832013,0,2.34574308406558,3.47382626845229,6.61643276650883,0.250707539292375,3.25848402338429,0.535928260312357,5.80418607621146,11.4810625406704,240.954399548108,64.2773964952099,0.129177819672012,1.24149428591716,0,9.99260384967189,15.7651407387411,302.190846080982,212.52687997396,19.5320953742304,10.3279975765454,39.5865824289756,0,0,0,0,4.69281884806909,1.833621662743,0.813792356631477,1.99727032255654,12.6802489962347,0 | ||
|short_description=p1@RYR1 | |||
}} | }} |
Latest revision as of 19:48, 17 September 2015
Short description: | p1@RYR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RYR1_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 0bp_to_ENST00000355481, ENST00000359596, ENST00000360985, NM_000540, NM_001042723, uc002oit.2, uc002oiu.2_5end |
EntrezGene: | RYR1 |
HGNC: | 10483 |
UniProt: | P21817 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.01e-07 | 5 |