FFCP PHASE1:Hg19::chr4:41992513..41992561,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10463 | |EntrezGene=10463 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1329 | |HGNC=1329 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9M6,F5H489,Q6PML9 | |UniProt=D6R9M6,F5H489,Q6PML9 | ||
|association_with_transcript=0bp_to_ENST00000510460,ENST00000513699,ENST00000536881,NM_006345,uc003gwl.2,uc011byx.1_5end | |association_with_transcript=0bp_to_ENST00000510460,ENST00000513699,ENST00000536881,NM_006345,uc003gwl.2,uc011byx.1_5end | ||
|cluster_id=chr4:41992513..41992561,+ | |||
|description=CAGE_peak_1_at_SLC30A9_5end | |description=CAGE_peak_1_at_SLC30A9_5end | ||
|id=chr4:41992513..41992561,+ | |id=chr4:41992513..41992561,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.53e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;4.53e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.16e-26!94;UBERON:0001016!6.16e-26!94;UBERON:0005743!2.33e-23!86;UBERON:0001017!2.79e-23!82;UBERON:0001049!1.48e-20!57;UBERON:0005068!1.48e-20!57;UBERON:0006241!1.48e-20!57;UBERON:0007135!1.48e-20!57;UBERON:0002780!1.73e-20!41;UBERON:0001890!1.73e-20!41;UBERON:0006240!1.73e-20!41;UBERON:0000955!2.07e-19!69;UBERON:0006238!2.07e-19!69;UBERON:0003080!3.30e-19!42;UBERON:0002616!1.28e-18!59;UBERON:0000033!2.78e-18!123;UBERON:0004121!1.41e-17!169;UBERON:0000153!2.10e-17!129;UBERON:0007811!2.10e-17!129;UBERON:0000924!1.44e-16!173;UBERON:0006601!1.44e-16!173;UBERON:0002020!1.79e-16!34;UBERON:0003528!1.79e-16!34;UBERON:0003075!1.94e-16!86;UBERON:0007284!1.94e-16!86;UBERON:0001893!2.48e-16!34;UBERON:0001869!2.55e-16!32;UBERON:0002791!1.05e-15!33;UBERON:0003056!5.10e-15!61;UBERON:0002346!6.07e-15!90;UBERON:0007023!9.69e-15!115;UBERON:0000956!1.28e-12!25;UBERON:0000203!1.28e-12!25;UBERON:0002619!4.73e-12!22;UBERON:0001950!5.38e-11!20 | |ontology_enrichment_uberon=UBERON:0000073!6.16e-26!94;UBERON:0001016!6.16e-26!94;UBERON:0005743!2.33e-23!86;UBERON:0001017!2.79e-23!82;UBERON:0001049!1.48e-20!57;UBERON:0005068!1.48e-20!57;UBERON:0006241!1.48e-20!57;UBERON:0007135!1.48e-20!57;UBERON:0002780!1.73e-20!41;UBERON:0001890!1.73e-20!41;UBERON:0006240!1.73e-20!41;UBERON:0000955!2.07e-19!69;UBERON:0006238!2.07e-19!69;UBERON:0003080!3.30e-19!42;UBERON:0002616!1.28e-18!59;UBERON:0000033!2.78e-18!123;UBERON:0004121!1.41e-17!169;UBERON:0000153!2.10e-17!129;UBERON:0007811!2.10e-17!129;UBERON:0000924!1.44e-16!173;UBERON:0006601!1.44e-16!173;UBERON:0002020!1.79e-16!34;UBERON:0003528!1.79e-16!34;UBERON:0003075!1.94e-16!86;UBERON:0007284!1.94e-16!86;UBERON:0001893!2.48e-16!34;UBERON:0001869!2.55e-16!32;UBERON:0002791!1.05e-15!33;UBERON:0003056!5.10e-15!61;UBERON:0002346!6.07e-15!90;UBERON:0007023!9.69e-15!115;UBERON:0000956!1.28e-12!25;UBERON:0000203!1.28e-12!25;UBERON:0002619!4.73e-12!22;UBERON:0001950!5.38e-11!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.98e-15;32!UBERON:0002780;1.13e-14;41!UBERON:0001890;1.13e-14;41!UBERON:0002791;2.05e-14;32!UBERON:0003528;2.45e-14;34!UBERON:0002020;2.45e-14;34!UBERON:0001893;2.99e-14;34!UBERON:0000073;1.35e-12;53!UBERON:0002616;1.35e-12;53!UBERON:0000956;1.44e-12;25!UBERON:0000203;1.44e-12;25!UBERON:0002619;4.77e-12;22!UBERON:0001950;5.35e-11;20!UBERON:0001016;3.74e-10;83!UBERON:0001017;4.72e-10;75!UBERON:0000955;1.40e-09;68 | |ontology_enrichment_uberon_v019=UBERON:0001869;7.98e-15;32!UBERON:0002780;1.13e-14;41!UBERON:0001890;1.13e-14;41!UBERON:0002791;2.05e-14;32!UBERON:0003528;2.45e-14;34!UBERON:0002020;2.45e-14;34!UBERON:0001893;2.99e-14;34!UBERON:0000073;1.35e-12;53!UBERON:0002616;1.35e-12;53!UBERON:0000956;1.44e-12;25!UBERON:0000203;1.44e-12;25!UBERON:0002619;4.77e-12;22!UBERON:0001950;5.35e-11;20!UBERON:0001016;3.74e-10;83!UBERON:0001017;4.72e-10;75!UBERON:0000955;1.40e-09;68 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.61e-27,89;UBERON:0001017,3.20e-24,81;UBERON:0001049,1.18e-21,56;UBERON:0005068,1.18e-21,56;UBERON:0006241,1.18e-21,56;UBERON:0007135,1.18e-21,56;UBERON:0000073,9.48e-21,53;UBERON:0002616,9.48e-21,53;UBERON:0002780,1.73e-20,41;UBERON:0001890,1.73e-20,41;UBERON:0003080,1.73e-20,41;UBERON:0006240,1.73e-20,41;UBERON:0000955,2.44e-20,68;UBERON:0006238,2.44e-20,68;UBERON:0003075,1.52e-17,82;UBERON:0007284,1.52e-17,82;UBERON:0004121,2.56e-17,171;UBERON:0000924,2.56e-17,171;UBERON:0006601,2.56e-17,171;UBERON:0003528,1.79e-16,34;UBERON:0002020,1.79e-16,34;UBERON:0001893,2.48e-16,34;UBERON:0001869,2.55e-16,32;UBERON:0002346,6.36e-16,86;UBERON:0003056,6.38e-16,61;UBERON:0002791,9.05e-16,32;UBERON:0010314,9.15e-15,132;UBERON:0007023,2.29e-14,114;UBERON:0011216,8.44e-14,223;UBERON:0000956,1.28e-12,25;UBERON:0000203,1.28e-12,25;UBERON:0010371,1.79e-12,104;UBERON:0002619,4.73e-12,22;UBERON:0001950,5.38e-11,20 | |||
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| ||
|short_description=p1@SLC30A9 | |short_description=p1@SLC30A9 | ||
}} | }} |
Latest revision as of 20:08, 17 September 2015
Short description: | p1@SLC30A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC30A9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000510460, ENST00000513699, ENST00000536881, NM_006345, uc003gwl.2, uc011byx.1_5end |
EntrezGene: | SLC30A9 |
HGNC: | 1329 |
UniProt: | D6R9M6F5H489Q6PML9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data