FFCP PHASE1:Hg19::chr1:158224298..158224321,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=909 | |EntrezGene=909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1634 | |HGNC=1634 | ||
|TSSclassifier=strong | |||
|UniProt=P06126 | |UniProt=P06126 | ||
|association_with_transcript=371bp_to_ENST00000289429,NM_001763,uc001frt.2_5end | |association_with_transcript=371bp_to_ENST00000289429,NM_001763,uc001frt.2_5end | ||
|cluster_id=chr1:158224298..158224321,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_6_at_CD1A_5end | |description=CAGE_peak_6_at_CD1A_5end | ||
|id=chr1:158224298..158224321,+ | |id=chr1:158224298..158224321,+ | ||
|ontology_enrichment_celltype=CL:0000840!7.24e-41!5;CL:0001029!7.24e-41!5;CL:0000990!2.95e-27!8;CL:0000451!2.69e-22!10;CL:0001014!1.39e-20!2;CL:0001016!1.39e-20!2;CL:0000453!8.67e-09!5 | |ontology_enrichment_celltype=CL:0000840!7.24e-41!5;CL:0001029!7.24e-41!5;CL:0000990!2.95e-27!8;CL:0000451!2.69e-22!10;CL:0001014!1.39e-20!2;CL:0001016!1.39e-20!2;CL:0000453!8.67e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000840;1.31e-75;5!CL:0000990;1.50e-50;8!CL:0000451;2.00e-41;10!CL:0001014;3.94e-37;2!CL:0001016;3.94e-37;2!CL:0000453;1.62e-15;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.31e-75,5;CL:0001029,1.31e-75,5;CL:0000990,1.50e-50,8;CL:0000451,2.00e-41,10;CL:0001014,3.94e-37,2;CL:0001016,3.94e-37,2;CL:0000453,1.62e-15,5;CL:0000738,5.80e-08,136;CL:0002009,1.91e-07,61;CL:0002031,5.39e-07,120;CL:0000557,8.70e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.88e-13!7;UBERON:0002171!7.46e-11!1;UBERON:0006518!7.46e-11!1;UBERON:0008949!7.46e-11!1;UBERON:0000101!7.46e-11!1;UBERON:0002167!7.46e-11!1;UBERON:0002372!1.10e-10!1;UBERON:0001961!1.10e-10!1;UBERON:0001744!1.10e-10!1;UBERON:0001735!1.10e-10!1;UBERON:0002370!1.10e-10!4;UBERON:0005058!1.10e-10!4;UBERON:0009113!1.10e-10!4;UBERON:0003295!1.10e-10!4;UBERON:0005562!1.10e-10!4;UBERON:0000974!3.22e-09!10;UBERON:0001042!3.31e-09!10;UBERON:0009145!3.31e-09!10;UBERON:0006562!2.05e-08!11;UBERON:0003351!2.09e-07!6;UBERON:0002193!4.84e-07!112;UBERON:0002405!8.04e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.20e-37;2!UBERON:0005058;8.20e-37;2!UBERON:0009113;8.20e-37;2!UBERON:0004177;2.17e-15;5!UBERON:0005057;2.17e-15;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.64e-19,4;UBERON:0005058,5.64e-19,4;UBERON:0009113,5.64e-19,4;UBERON:0003295,5.64e-19,4;UBERON:0005562,5.64e-19,4;UBERON:0003351,5.42e-13,6;UBERON:0004177,2.83e-11,7;UBERON:0005057,2.83e-11,7;UBERON:0002405,3.61e-09,93;UBERON:0002390,1.10e-08,98;UBERON:0003061,1.10e-08,98;UBERON:0000974,3.63e-08,10;UBERON:0003408,3.63e-08,10;UBERON:0001042,3.63e-08,10;UBERON:0009145,3.63e-08,10;UBERON:0002193,7.50e-08,108;UBERON:0006562,1.67e-07,11;UBERON:0009722,1.67e-07,11;UBERON:0007690,1.67e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.057774956563,70.5225436062032,62.7561573649044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78841148289775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84968792705877,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.6201699370276,43.3329094552452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,14.1449712540853,7.57311514409466,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.057774956563,70.5225436062032,62.7561573649044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78841148289775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84968792705877,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.6201699370276,43.3329094552452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,14.1449712540853,7.57311514409466,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p6@CD1A | |short_description=p6@CD1A | ||
}} | }} |
Latest revision as of 20:10, 17 September 2015
Short description: | p6@CD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD1A_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 371bp_to_ENST00000289429, NM_001763, uc001frt.2_5end |
EntrezGene: | CD1A |
HGNC: | 1634 |
UniProt: | P06126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.31e-75 | 5 |
common dendritic progenitor | 1.31e-75 | 5 |
conventional dendritic cell | 1.50e-50 | 8 |
dendritic cell | 2.00e-41 | 10 |
CD1a-positive Langerhans cell | 3.94e-37 | 2 |
immature CD1a-positive Langerhans cell | 3.94e-37 | 2 |
Langerhans cell | 1.62e-15 | 5 |
leukocyte | 5.80e-08 | 136 |
macrophage dendritic cell progenitor | 1.91e-07 | 61 |
hematopoietic lineage restricted progenitor cell | 5.39e-07 | 120 |
granulocyte monocyte progenitor cell | 8.70e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.64e-19 | 4 |
hemolymphoid system gland | 5.64e-19 | 4 |
thymic region | 5.64e-19 | 4 |
pharyngeal gland | 5.64e-19 | 4 |
thymus primordium | 5.64e-19 | 4 |
pharyngeal epithelium | 5.42e-13 | 6 |
hemopoietic organ | 2.83e-11 | 7 |
immune organ | 2.83e-11 | 7 |
immune system | 3.61e-09 | 93 |
hematopoietic system | 1.10e-08 | 98 |
blood island | 1.10e-08 | 98 |
neck | 3.63e-08 | 10 |
gland of gut | 3.63e-08 | 10 |
chordate pharynx | 3.63e-08 | 10 |
pharyngeal region of foregut | 3.63e-08 | 10 |
hemolymphoid system | 7.50e-08 | 108 |
pharynx | 1.67e-07 | 11 |
entire pharyngeal arch endoderm | 1.67e-07 | 11 |
early pharyngeal endoderm | 1.67e-07 | 11 |