FFCP PHASE1:Hg19::chr1:158326285..158326296,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |EntrezGene=913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1638 | |HGNC=1638 | ||
|TSSclassifier=strong | |||
|UniProt=Q13974 | |UniProt=Q13974 | ||
|association_with_transcript=0bp_to_X79519_5end | |association_with_transcript=0bp_to_X79519_5end | ||
|cluster_id=chr1:158326285..158326296,+ | |||
|coexpression_cluster_id=C419 | |||
|description=CAGE_peak_15_at_CD1E_5end | |description=CAGE_peak_15_at_CD1E_5end | ||
|id=chr1:158326285..158326296,+ | |id=chr1:158326285..158326296,+ | ||
|ontology_enrichment_celltype=CL:0000840!9.14e-52!5;CL:0001029!9.14e-52!5;CL:0000990!1.42e-34!8;CL:0000451!2.59e-28!10;CL:0001014!1.12e-25!2;CL:0001016!1.12e-25!2;CL:0000453!7.14e-11!5;CL:0000738!2.53e-09!140;CL:0000037!2.49e-07!172;CL:0000566!2.49e-07!172;CL:0002031!4.54e-07!124;CL:0000988!7.56e-07!182 | |ontology_enrichment_celltype=CL:0000840!9.14e-52!5;CL:0001029!9.14e-52!5;CL:0000990!1.42e-34!8;CL:0000451!2.59e-28!10;CL:0001014!1.12e-25!2;CL:0001016!1.12e-25!2;CL:0000453!7.14e-11!5;CL:0000738!2.53e-09!140;CL:0000037!2.49e-07!172;CL:0000566!2.49e-07!172;CL:0002031!4.54e-07!124;CL:0000988!7.56e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000840;1.42e-42;5!CL:0000990;1.05e-28;8!CL:0000451;1.18e-23;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.76e-42,5;CL:0001029,1.76e-42,5;CL:0000990,1.21e-28,8;CL:0000451,1.33e-23,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.04e-13!4;UBERON:0005058!1.04e-13!4;UBERON:0009113!1.04e-13!4;UBERON:0003295!1.04e-13!4;UBERON:0005562!1.04e-13!4;UBERON:0000974!5.81e-12!10;UBERON:0003351!1.91e-09!6;UBERON:0002390!8.68e-09!102;UBERON:0003061!8.68e-09!102;UBERON:0004177!3.21e-08!7;UBERON:0002193!6.47e-08!112;UBERON:0000341!1.64e-07!2 | |ontology_enrichment_uberon=UBERON:0002370!1.04e-13!4;UBERON:0005058!1.04e-13!4;UBERON:0009113!1.04e-13!4;UBERON:0003295!1.04e-13!4;UBERON:0005562!1.04e-13!4;UBERON:0000974!5.81e-12!10;UBERON:0003351!1.91e-09!6;UBERON:0002390!8.68e-09!102;UBERON:0003061!8.68e-09!102;UBERON:0004177!3.21e-08!7;UBERON:0002193!6.47e-08!112;UBERON:0000341!1.64e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.51e-57;2!UBERON:0005058;5.51e-57;2!UBERON:0009113;5.51e-57;2!UBERON:0004177;1.52e-23;5!UBERON:0005057;1.52e-23;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.16e-29,4;UBERON:0005058,3.16e-29,4;UBERON:0009113,3.16e-29,4;UBERON:0003295,3.16e-29,4;UBERON:0005562,3.16e-29,4;UBERON:0003351,7.13e-20,6;UBERON:0004177,3.42e-17,7;UBERON:0005057,3.42e-17,7;UBERON:0000974,2.37e-12,10;UBERON:0003408,2.37e-12,10;UBERON:0001042,2.37e-12,10;UBERON:0009145,2.37e-12,10;UBERON:0006562,2.55e-11,11;UBERON:0009722,2.55e-11,11;UBERON:0007690,2.55e-11,11;UBERON:0002405,8.10e-08,93;UBERON:0002390,1.96e-07,98;UBERON:0003061,1.96e-07,98;UBERON:0008814,2.77e-07,18;UBERON:0001557,6.01e-07,19;UBERON:0002193,9.00e-07,108 | |||
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|short_description=p15@CD1E | |short_description=p15@CD1E | ||
}} | }} |
Latest revision as of 21:10, 17 September 2015
Short description: | p15@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CD1E_5end |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | 0bp_to_X79519_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | Q13974 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.76e-42 | 5 |
common dendritic progenitor | 1.76e-42 | 5 |
conventional dendritic cell | 1.21e-28 | 8 |
dendritic cell | 1.33e-23 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.16e-29 | 4 |
hemolymphoid system gland | 3.16e-29 | 4 |
thymic region | 3.16e-29 | 4 |
pharyngeal gland | 3.16e-29 | 4 |
thymus primordium | 3.16e-29 | 4 |
pharyngeal epithelium | 7.13e-20 | 6 |
hemopoietic organ | 3.42e-17 | 7 |
immune organ | 3.42e-17 | 7 |
neck | 2.37e-12 | 10 |
gland of gut | 2.37e-12 | 10 |
chordate pharynx | 2.37e-12 | 10 |
pharyngeal region of foregut | 2.37e-12 | 10 |
pharynx | 2.55e-11 | 11 |
entire pharyngeal arch endoderm | 2.55e-11 | 11 |
early pharyngeal endoderm | 2.55e-11 | 11 |
immune system | 8.10e-08 | 93 |
hematopoietic system | 1.96e-07 | 98 |
blood island | 1.96e-07 | 98 |
pharyngeal arch system | 2.77e-07 | 18 |
upper respiratory tract | 6.01e-07 | 19 |
hemolymphoid system | 9.00e-07 | 108 |