FFCP PHASE1:Hg19::chr9:79009215..79009226,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:79009215..79009226,-
|short_description=p6@RFK
|description=CAGE_peak_6_at_RFK_5end
|association_with_transcript=-167bp_to_ENST00000490113_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55312 | |EntrezGene=55312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30324 | |HGNC=30324 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-167bp_to_ENST00000490113_5end | |||
|cluster_id=chr9:79009215..79009226,- | |||
|description=CAGE_peak_6_at_RFK_5end | |||
|id=chr9:79009215..79009226,- | |||
|ontology_enrichment_celltype=CL:0000066!1.08e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002605;6.03e-12;3!CL:0002253;2.89e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.08e-12,3;CL:0002253,4.06e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.20e-09;29!UBERON:0001041;1.13e-08;30 | |||
|ontology_enrichment_disease=DOID:305!3.80e-21!106;DOID:0050687!1.41e-18!143;DOID:162!7.15e-15!235;DOID:14566!1.99e-14!239;DOID:0050615!3.69e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:4468;8.65e-09;2!DOID:0050615;4.23e-08;16!DOID:305;2.79e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.40e-20,106;DOID:0050687,5.42e-16,143;DOID:162,7.94e-14,235;DOID:14566,2.35e-13,239;DOID:0050686,7.74e-09,137;DOID:4468,8.42e-09,2;DOID:0050615,2.54e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.70e-07!155;UBERON:0001555!1.70e-07!155;UBERON:0007026!1.70e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.81e-09;4!UBERON:0004907;4.18e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,6.78e-09,4;UBERON:0004907,3.40e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0.313454721478088,2.28988789704845,1.09499540058307,1.50651167513763,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.309868802321207,0.284338464974843,0.293600439334847,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.434539556882471,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0,0.348259474598534,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.892997282840798,0,0.450445921933289,0,0,0.732806975721629,0,0,0,0,0.379891534993739,0,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0.61246251376468,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.500474079487857,0,0.438977620880838,0,0.150238058906597,0.453728732640084,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0.184099797284599,0.161646056818812,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0.860413786167011,0.243947412259191,0.132529768321485,0.580969714347592,0.414644220061482,1.7662459561294,1.09493207722749,0,0,0,0,0.721879481669586,1.0647612003586,1.01150814046861,0.241011029883482,1.10293972732394,0,1.18635309555548,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0.737930631258681,0.514703430895577,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.469634776943287,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0.268675568108545,0,0,0,0.176096868026452,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.51336800074665,0.129271715757778,0,0,1.06375246633948,0,0.257207374262142,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.723906533337896,0.410952645100767,0.179060963239896,0,0,0,0,1.01637849688985,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.521301686808497,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0,0.483437798366489,0.40101294060657,0.0920809889358963,0.574072240823034,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0.438519753291869,0,0.769350375349168,0,0.650756789328606,0.309123034943167,0.183138929636687,0.247528499761764,0.574265537996172,0,0,0.096670718292122,0,0.15350367472613,0.275673144969061,0.214840489736547,0.145016693914229,0,0.0890320356467374,0.330569830721956,0,0,0.2023155617111,0,0,1.3940745403212,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0.404364963146632,1.58510321173008,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0.563391205064483,0.430234056612155,0.196498082026242,0.35667105148125,0,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0.962479855263359,0,0.371606350251437,1.00988449083511,0.0711418433484141,0,0,0.191505370132367,0.211673582723883,0,0,0,0.313359791546046,0,0.169291777801603,0,0,0,0.687010689511529,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0.561421621224659,0,0.121360521749513,0.111443384277478,0.568272293612826,0.47748896947538,0,0,0.994147647766298,0.140669416410513,1.11308705022906,0,0.211125408127993,0,0,0.503865495708552,0.306806047506464,0,0.622079175323615,0.629078458031288,0.537063524026827,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,1.5255219017566,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0.658156191461918,1.19832309870889,0.41827123283581,0.153900517007594,0.455768223388005,0.69169171316418,4.57763986489838,0.434589487688032,0.957003479195758,1.09917112082235,1.06606955203727,0,0,0.498635045700469,1.35357396370308,0.392125068635479,0.503464760927528,0.37950746544837,1.11255605286265,5.06395354867265,1.14262965711403,1.13082457147153,1.08194319871046,0,0.176915129006678,0,0.296521128680622,0.247127877893006,0.417687798021821,0,0,0.234264445725339,0.182454789215666,0.978323094660449,0.485560759068186,0.394584402849391,0,0,0.063186579628488,0.60129367765797,0.311064574191741,0,0,0.627865836814451,0,0.284609546029793,0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| ||
|short_description=p6@RFK | |||
}} | }} |
Latest revision as of 21:40, 17 September 2015
Short description: | p6@RFK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RFK_5end |
Coexpression cluster: | NA |
Association with transcript: | -167bp_to_ENST00000490113_5end |
EntrezGene: | RFK |
HGNC: | 30324 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.08e-12 | 3 |
epithelial cell of large intestine | 4.06e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
rectum | 6.78e-09 | 4 |
lower digestive tract | 3.40e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.40e-20 | 106 |
cell type cancer | 5.42e-16 | 143 |
cancer | 7.94e-14 | 235 |
disease of cellular proliferation | 2.35e-13 | 239 |
organ system cancer | 7.74e-09 | 137 |
clear cell adenocarcinoma | 8.42e-09 | 2 |
respiratory system cancer | 2.54e-08 | 16 |