FFCP PHASE1:Hg19::chr9:79009244..79009257,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55312 | |EntrezGene=55312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30324 | |HGNC=30324 | ||
|TSSclassifier=strong | |||
|UniProt=Q969G6 | |UniProt=Q969G6 | ||
|association_with_transcript=163bp_to_ENST00000376736_5end | |association_with_transcript=163bp_to_ENST00000376736_5end | ||
|cluster_id=chr9:79009244..79009257,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_4_at_RFK_5end | |description=CAGE_peak_4_at_RFK_5end | ||
|id=chr9:79009244..79009257,- | |id=chr9:79009244..79009257,- | ||
|ontology_enrichment_celltype=CL:0000066!2.36e-09!254 | |ontology_enrichment_celltype=CL:0000066!2.36e-09!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.78e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.53e-07;29 | |||
|ontology_enrichment_disease=DOID:305!5.98e-18!106;DOID:0050687!6.86e-14!143;DOID:14566!3.05e-12!239;DOID:162!8.80e-12!235 | |ontology_enrichment_disease=DOID:305!5.98e-18!106;DOID:0050687!6.86e-14!143;DOID:14566!3.05e-12!239;DOID:162!8.80e-12!235 | ||
|ontology_enrichment_disease_v019=DOID:299;5.95e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.49e-19,106;DOID:0050687,3.88e-15,143;DOID:162,1.16e-12,235;DOID:14566,1.76e-12,239;DOID:299,2.40e-07,25;DOID:3119,9.46e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.44e-10!155;UBERON:0001555!3.44e-10!155;UBERON:0007026!3.44e-10!155;UBERON:0000467!2.06e-09!625;UBERON:0000480!3.42e-09!626;UBERON:0000481!8.94e-09!347;UBERON:0000468!1.70e-08!659;UBERON:0004119!1.85e-08!169;UBERON:0000925!1.85e-08!169;UBERON:0006595!1.85e-08!169;UBERON:0000477!1.59e-07!286;UBERON:0000922!1.67e-07!612;UBERON:0004921!2.77e-07!129;UBERON:0004185!2.77e-07!129;UBERON:0000077!5.57e-07!130;UBERON:0000062!7.52e-07!511 | |ontology_enrichment_uberon=UBERON:0001007!3.44e-10!155;UBERON:0001555!3.44e-10!155;UBERON:0007026!3.44e-10!155;UBERON:0000467!2.06e-09!625;UBERON:0000480!3.42e-09!626;UBERON:0000481!8.94e-09!347;UBERON:0000468!1.70e-08!659;UBERON:0004119!1.85e-08!169;UBERON:0000925!1.85e-08!169;UBERON:0006595!1.85e-08!169;UBERON:0000477!1.59e-07!286;UBERON:0000922!1.67e-07!612;UBERON:0004921!2.77e-07!129;UBERON:0004185!2.77e-07!129;UBERON:0000077!5.57e-07!130;UBERON:0000062!7.52e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.60e-10;9!UBERON:0001557;7.60e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.03e-10,9;UBERON:0001007,1.07e-08,145;UBERON:0001555,1.07e-08,145;UBERON:0007026,1.07e-08,145;UBERON:0004921,6.18e-08,118;UBERON:0004119,3.06e-07,160;UBERON:0000925,3.06e-07,160;UBERON:0006595,3.06e-07,160 | |||
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| ||
|short_description=p4@RFK | |short_description=p4@RFK | ||
}} | }} |
Latest revision as of 21:40, 17 September 2015
Short description: | p4@RFK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RFK_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 163bp_to_ENST00000376736_5end |
EntrezGene: | RFK |
HGNC: | 30324 |
UniProt: | Q969G6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.78e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.03e-10 | 9 |
digestive system | 1.07e-08 | 145 |
digestive tract | 1.07e-08 | 145 |
primitive gut | 1.07e-08 | 145 |
subdivision of digestive tract | 6.18e-08 | 118 |
endoderm-derived structure | 3.06e-07 | 160 |
endoderm | 3.06e-07 | 160 |
presumptive endoderm | 3.06e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.49e-19 | 106 |
cell type cancer | 3.88e-15 | 143 |
cancer | 1.16e-12 | 235 |
disease of cellular proliferation | 1.76e-12 | 239 |
adenocarcinoma | 2.40e-07 | 25 |
gastrointestinal system cancer | 9.46e-07 | 14 |