FFCP PHASE1:Hg19::chr5:40909592..40909608,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1346 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPA5,Q05CI3,P10643 | |||
|association_with_transcript=0bp_to_ENST00000440677,ENST00000515157,NM_000587,uc003jmh.2,uc011cpn.1_5end | |||
|cluster_id=chr5:40909592..40909608,+ | |||
|coexpression_cluster_id=C4499 | |||
|description=CAGE_peak_1_at_C7_5end | |||
|id=chr5:40909592..40909608,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.48e-08;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;6.83e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.51e-57!115;UBERON:0000481!1.62e-16!347;UBERON:0002616!8.61e-16!59;UBERON:0000073!1.40e-15!94;UBERON:0001016!1.40e-15!94;UBERON:0000955!4.02e-15!69;UBERON:0006238!4.02e-15!69;UBERON:0005743!8.81e-15!86;UBERON:0001017!1.06e-14!82;UBERON:0001049!3.67e-14!57;UBERON:0005068!3.67e-14!57;UBERON:0006241!3.67e-14!57;UBERON:0007135!3.67e-14!57;UBERON:0000477!7.13e-14!286;UBERON:0003075!7.73e-13!86;UBERON:0007284!7.73e-13!86;UBERON:0002346!2.55e-12!90;UBERON:0000475!2.90e-12!365;UBERON:0004111!3.36e-12!241;UBERON:0000153!1.41e-11!129;UBERON:0007811!1.41e-11!129;UBERON:0000119!2.34e-11!312;UBERON:0000468!2.87e-11!659;UBERON:0000062!4.24e-11!511;UBERON:0000025!8.87e-11!194;UBERON:0000483!1.71e-10!309;UBERON:0000033!2.58e-10!123;UBERON:0000922!2.85e-10!612;UBERON:0007100!4.29e-10!27;UBERON:0002050!9.98e-10!605;UBERON:0005423!9.98e-10!605;UBERON:0003080!1.11e-09!42;UBERON:0000923!2.42e-09!604;UBERON:0005291!2.42e-09!604;UBERON:0006598!2.42e-09!604;UBERON:0002532!2.42e-09!604;UBERON:0002780!4.51e-09!41;UBERON:0001890!4.51e-09!41;UBERON:0006240!4.51e-09!41;UBERON:0000467!4.95e-09!625;UBERON:0000480!6.15e-09!626;UBERON:0003103!6.96e-09!69;UBERON:0004121!1.71e-08!169;UBERON:0000924!2.52e-08!173;UBERON:0006601!2.52e-08!173;UBERON:0002368!5.56e-08!35;UBERON:0005057!5.77e-08!26;UBERON:0000948!6.99e-08!24;UBERON:0005498!6.99e-08!24;UBERON:0004140!6.99e-08!24;UBERON:0009881!6.99e-08!24;UBERON:0004141!6.99e-08!24;UBERON:0003084!6.99e-08!24;UBERON:0007005!6.99e-08!24;UBERON:0004139!6.99e-08!24;UBERON:0004291!6.99e-08!24;UBERON:0004921!1.13e-07!129;UBERON:0004185!1.13e-07!129;UBERON:0000479!3.96e-07!787;UBERON:0002530!5.35e-07!59;UBERON:0002107!6.45e-07!19;UBERON:0006925!6.45e-07!19;UBERON:0008836!6.45e-07!19;UBERON:0003056!7.55e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.72e-14;25!UBERON:0007023;5.28e-12;114!UBERON:0000948;2.73e-11;22!UBERON:0002368;1.64e-07;33!UBERON:0000160;4.02e-07;17!UBERON:0004921;5.38e-07;33!UBERON:0000059;8.93e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.80e-44,114;UBERON:0007100,1.09e-14,27;UBERON:0011216,5.32e-13,223;UBERON:0003103,1.88e-12,68;UBERON:0000948,1.55e-11,24;UBERON:0005498,1.55e-11,24;UBERON:0004140,1.55e-11,24;UBERON:0009881,1.55e-11,24;UBERON:0004141,1.55e-11,24;UBERON:0003084,1.55e-11,24;UBERON:0007005,1.55e-11,24;UBERON:0004139,1.55e-11,24;UBERON:0004291,1.55e-11,24;UBERON:0004921,2.85e-09,118;UBERON:0002368,1.06e-07,35;UBERON:0000479,1.87e-07,773;UBERON:0005409,2.49e-07,25;UBERON:0001007,2.61e-07,145;UBERON:0001555,2.61e-07,145;UBERON:0007026,2.61e-07,145;UBERON:0004119,3.99e-07,160;UBERON:0000925,3.99e-07,160;UBERON:0006595,3.99e-07,160;UBERON:0000160,4.25e-07,17;UBERON:0002050,7.17e-07,564;UBERON:0000922,7.48e-07,592;UBERON:0001048,8.61e-07,160;UBERON:0005423,9.20e-07,581;UBERON:0000059,9.42e-07,11 | |||
|phase1_expression=1.09007027562334,0.428201047781966,12.6858963686374,4.00293193412522,46.9309149148652,3.48935409640147,0,71.3843456972319,6.52964070499596,0,0,0,0,2.84662611808107,2.98257638155124,0,0,0,0,0,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,514.432487922459,88.53251348088,227.08390983411,0,0,0.144846518960824,0,0,0,0,0,78.6529348363764,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,2.29469296599051,0.709336764396714,6.16745360156538,0,0,1996.1075810541,37.4495668353733,218.712026365808,784.18283262839,512.220396862719,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,1.82032272387605,7.18618141816238,0,0,0,0,0,0,21.665546983564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,69.5560079150066,144.068537157831,2.53510069643662,3.9313088667105,202.640937991722,0,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45770409648969,5.23152082599936,0.5867062865676,0,0,0.845302752556,0,0,0.257207374262142,0,0,236.342623516918,0,0,0,216.078304835468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5620645323037,13.0044335475516,10.8506009479894,0,0,0,0,3.31040709700491,0,0,0,0.184369168541703,0,30.3491794067248,41.1772108573027,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,134.674602223573,0,0,0,0,0,0.386682873168488,3.38906957652218,6.29365066377131,0,3.75970857038958,0.725083469571143,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,64.0112395298628,0.316379424718726,7.05331717518152,2.04718233049067,88.5833705230215,0,0,3.05783177891635,9.88333307049797,6.00843251963001,0,0,0,0.975267478179181,0,0,0.136499911407986,0,0,0,0,0,2.31510213706675,46.5685273953109,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,138.485530942642,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.1687983754022,0,0,0,0,0,0,1.9882952955326,0.844016498463076,0,0,0,48.0187651685078,20.1687258337738,0,0,0,0,0,0,0,110.381970907729,0,0,0.969332746095218,2.50473865036998,0,0,0,28.2749834419569,0,0,0,0,0.291604613383254,0,1.77148277162768,0.723578631752448,0,0.995213339381022,0.886642856860642,1.09692698576986,0,0,90.8782552929843,0.341826167541004,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,8.95735737970654,98.9840146792365,34.8287182612167,0,0,0,7.41412462787447,94.7041623812571,0.234264445725339,0,0,0,39.4584402849391,64.1250795057919,0,151.710977688,0,0,0,0,0,0,0,0,0,0,0,146.945127991547,0,0,0,0,157.025217694751,0,3.16373037092745,0,0,0.633107959558787,0,0,142.586600485888,0,0,0,0,0,0,0,0,0,0,0,0,1.50595916781192,0,0.859530882839914,0,194.939116088033,58.2067476989676,68.9158103593741,25.5589120638709,52.7948039207982,116.272329327216,212.702873892975,0,0,0.157566364614447,0.247247575143499,0.26961417541674,0.196854963029498,0,0,0.817220436669454,0,0,0,0,0,0.242998226632099,0,229.95505389906,331.460542425053,0,0,0,217.982074543877,180.751107909763,0.76280561296425,0,0,0,0,0,0,0,101.707250172589,25.1763088933221,0.646414781807753,0.66116300871345,0,0,106.253475504856,183.45742405131,53.8510771951354,197.970242702968,0,0,0,3.80812462358632,0,3.36980134439808,5.90170735277648,0,0,0.122026264901963,0.751145584238999,11.4681839138014,8.65246601987448,7.1410863382591,0.138348634936231,0.874862855734746,0,0,0,0,0,0,0,0,0,0,0,0,4.53692771289717,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61711666268562,2.18419276384028,0,0,1.73510069962603,0,0,0,0,0.705351887381368,0,2.56916900385838,0,0.478901577171454,0.41023272848151,0,0.553258019713743,1.77623210195036,1.42769420259154,0,0,0,0,0,0,0,581.074996826361,0,82.8404851907078,0,0,0,0.405225507710368,0,0.206686796501184,0.760989722326882,0,2.19303106742873,9.92422356778589,0,0,11.249738553444,25.8938466108494,4.24875922965642,12.2937583329701,100.677190134595,0,0,0.475788130837822,0.526182188502793,0,0,153.218517244203,0.314231179832004,0,23.7421267332469,0,0,2.07281978112303,0.158013611732727,0,0,0,0,0.85359238546975,0.691259661814092,13.3370481234286,0.828324005113957,0.766920642832419,26.6733841620285,0,0,0,0,0,0,0.647428837187895,3.69586104682489,3.4794432940146,7.28566489588709,0,0,0.118920090777569,0.22589216407792,0,0,38.9729498445121,25.1343494579551,0,119.87752933766,0,5.69294554633341,6.53502080719589,2.113278637917,0,94.8297732416723,31.6488229950264,0,0,0,0,19.719082482656,12.8444199353271,8.17035623963272,0,0.475940431336403,0,49.1994961679322,0,0,0,0,0,0,0,0,0,0,176.867481641371,26.7964130156178,0,0.413731983447581,8.31612529413825,13.8077370248969,5.94217970491256,23.6504661467219,0,83.3141301861179,27.8921720762343,1.30630048738177,0.684466602170562,18.2524063669532,55.2978203577535,18.6289799665768,0,0,0,0,14.0784565442073,109.528333987848,39.8758254749424,76.5620290313339,67.0241732658117,0 | |||
|short_description=p1@C7 | |||
}} |
Latest revision as of 22:21, 17 September 2015
Short description: | p1@C7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C7_5end |
Coexpression cluster: | C4499_Fibroblast_ovary_Cardiac_kidney_Mesenchymal_left_heart |
Association with transcript: | 0bp_to_ENST00000440677, ENST00000515157, NM_000587, uc003jmh.2, uc011cpn.1_5end |
EntrezGene: | C7 |
HGNC: | 1346 |
UniProt: | E7EPA5Q05CI3P10643 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 9.80e-44 | 114 |
primary circulatory organ | 1.09e-14 | 27 |
organ system subdivision | 5.32e-13 | 223 |
compound organ | 1.88e-12 | 68 |
heart | 1.55e-11 | 24 |
primitive heart tube | 1.55e-11 | 24 |
primary heart field | 1.55e-11 | 24 |
anterior lateral plate mesoderm | 1.55e-11 | 24 |
heart tube | 1.55e-11 | 24 |
heart primordium | 1.55e-11 | 24 |
cardiac mesoderm | 1.55e-11 | 24 |
cardiogenic plate | 1.55e-11 | 24 |
heart rudiment | 1.55e-11 | 24 |
subdivision of digestive tract | 2.85e-09 | 118 |
endocrine gland | 1.06e-07 | 35 |
tissue | 1.87e-07 | 773 |
gastrointestinal system | 2.49e-07 | 25 |
digestive system | 2.61e-07 | 145 |
digestive tract | 2.61e-07 | 145 |
primitive gut | 2.61e-07 | 145 |
endoderm-derived structure | 3.99e-07 | 160 |
endoderm | 3.99e-07 | 160 |
presumptive endoderm | 3.99e-07 | 160 |
intestine | 4.25e-07 | 17 |
embryonic structure | 7.17e-07 | 564 |
embryo | 7.48e-07 | 592 |
primordium | 8.61e-07 | 160 |
developing anatomical structure | 9.20e-07 | 581 |
large intestine | 9.42e-07 | 11 |