FFCP PHASE2:Hg19::chr12:25205155..25205214,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4033 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6690 |TSSclass...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6690 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8W9L6,F8VRE4,Q12912 | ||
|association_with_transcript=0bp_to_ENST00000361433,ENST00000550945,ENST00000555141,NM_001204126,NM_001204127,NM_006152_5end | |association_with_transcript=0bp_to_ENST00000361433,ENST00000550945,ENST00000555141,NM_001204126,NM_001204127,NM_006152_5end | ||
|cluster_id=chr12:25205155..25205214,+ | |cluster_id=chr12:25205155..25205214,+ | ||
Latest revision as of 22:22, 17 September 2015
| Short description: | p3@LRMP |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_LRMP_5end |
| Coexpression cluster: | C3269_Hodgkin_thymus_acute_Burkitt_mycosis_non_B |
| Association with transcript: | 0bp_to_ENST00000361433, ENST00000550945, ENST00000555141, NM_001204126, NM_001204127, NM_006152_5end |
| EntrezGene: | LRMP |
| HGNC: | 6690 |
| UniProt: | F8W9L6F8VRE4Q12912 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@LRMP |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 2.29e-69 | 168 |
| leukocyte | 1.47e-65 | 136 |
| hematopoietic cell | 2.08e-65 | 177 |
| hematopoietic oligopotent progenitor cell | 3.37e-62 | 161 |
| hematopoietic multipotent progenitor cell | 3.37e-62 | 161 |
| hematopoietic lineage restricted progenitor cell | 8.69e-51 | 120 |
| nongranular leukocyte | 7.27e-49 | 115 |
| lymphocyte | 1.30e-46 | 53 |
| common lymphoid progenitor | 1.30e-46 | 53 |
| lymphoid lineage restricted progenitor cell | 1.14e-45 | 52 |
Showing 1 to 10 of 44 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.38e-22 | 98 |
| blood island | 1.38e-22 | 98 |
| hemolymphoid system | 8.54e-21 | 108 |
| immune system | 1.24e-12 | 93 |
| connective tissue | 1.66e-12 | 371 |
| blood | 2.49e-12 | 15 |
| haemolymphatic fluid | 2.49e-12 | 15 |
| organism substance | 2.49e-12 | 15 |
| bone marrow | 1.32e-09 | 76 |
| hemopoietic organ | 1.43e-08 | 7 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 2.99e-15 | 51 |
| immune system cancer | 2.99e-15 | 51 |
| lymphoma | 4.62e-10 | 10 |
| leukemia | 2.18e-09 | 39 |
Showing 1 to 4 of 4 entries
