FFCP PHASE1:Hg19::chr4:48485501..48485512,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:48485501..48485512,+
|short_description=p7@SLC10A4
|description=CAGE_peak_7_at_SLC10A4_5end
|association_with_transcript=141bp_to_ENST00000273861,NM_152679...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=201780 | |EntrezGene=201780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22980 | |HGNC=22980 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EP9 | |UniProt=Q96EP9 | ||
|association_with_transcript=141bp_to_ENST00000273861,NM_152679,uc003gyc.2_5end | |||
|cluster_id=chr4:48485501..48485512,+ | |||
|description=CAGE_peak_7_at_SLC10A4_5end | |||
|id=chr4:48485501..48485512,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.55e-98;2!CL:0000333;2.80e-11;5!CL:0002319;2.14e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.11e-25,8;CL:0002319,2.14e-08,25;CL:0000133,3.34e-08,59;CL:0000221,6.64e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.10e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.27e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.32e-09,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001873;8.10e-26;2!UBERON:0005383;1.03e-17;3!UBERON:0005382;1.03e-17;3!UBERON:0000369;1.21e-13;4!UBERON:0002435;1.21e-13;4!UBERON:0000204;1.21e-13;4!UBERON:0000013;2.80e-11;5!UBERON:0002410;2.80e-11;5!UBERON:0009663;2.26e-08;7!UBERON:0000010;7.69e-07;8!UBERON:0002420;8.61e-07;9!UBERON:0000125;8.61e-07;9!UBERON:0007245;8.61e-07;9!UBERON:0002308;8.61e-07;9!UBERON:0010009;8.61e-07;9!UBERON:0010011;8.61e-07;9!UBERON:0000454;8.61e-07;9 | |||
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| ||
|short_description=p7@SLC10A4 | |||
}} | }} |
Latest revision as of 22:48, 17 September 2015
Short description: | p7@SLC10A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC10A4_5end |
Coexpression cluster: | NA |
Association with transcript: | 141bp_to_ENST00000273861, NM_152679, uc003gyc.2_5end |
EntrezGene: | SLC10A4 |
HGNC: | 22980 |
UniProt: | Q96EP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.11e-25 | 8 |
neural cell | 2.14e-08 | 25 |
neurectodermal cell | 3.34e-08 | 59 |
ectodermal cell | 6.64e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 7.14e-26 | 2 |
future caudate nucleus | 7.14e-26 | 2 |
caudate-putamen | 9.46e-18 | 3 |
dorsal striatum | 9.46e-18 | 3 |
corpus striatum | 1.13e-13 | 4 |
striatum | 1.13e-13 | 4 |
ventral part of telencephalon | 1.13e-13 | 4 |
future corpus striatum | 1.13e-13 | 4 |
sympathetic nervous system | 2.94e-11 | 5 |
autonomic nervous system | 2.94e-11 | 5 |
nervous system | 1.88e-09 | 89 |
telencephalic nucleus | 2.18e-08 | 7 |
peripheral nervous system | 7.91e-07 | 8 |
basal ganglion | 8.37e-07 | 9 |
neural nucleus | 8.37e-07 | 9 |
nuclear complex of neuraxis | 8.37e-07 | 9 |
nucleus of brain | 8.37e-07 | 9 |
aggregate regional part of brain | 8.37e-07 | 9 |
collection of basal ganglia | 8.37e-07 | 9 |
cerebral subcortex | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.32e-09 | 6 |