FFCP PHASE1:Hg19::chr5:41870495..41870512,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5019 | |EntrezGene=5019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8527 | |HGNC=8527 | ||
|TSSclassifier=strong | |||
|UniProt=P55809 | |UniProt=P55809 | ||
|association_with_transcript=108bp_to_ENST00000196371_5end | |association_with_transcript=108bp_to_ENST00000196371_5end | ||
|cluster_id=chr5:41870495..41870512,- | |||
|coexpression_cluster_id=C4500 | |coexpression_cluster_id=C4500 | ||
|description=CAGE_peak_4_at_OXCT1_5end | |description=CAGE_peak_4_at_OXCT1_5end | ||
|id=chr5:41870495..41870512,- | |id=chr5:41870495..41870512,- | ||
|ontology_enrichment_celltype=CL:0000838!3.04e-07!52;CL:0000542!5.43e-07!53;CL:0000051!5.43e-07!53 | |ontology_enrichment_celltype=CL:0000838!3.04e-07!52;CL:0000542!5.43e-07!53;CL:0000051!5.43e-07!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.00e-07,52;CL:0000542,5.38e-07,53;CL:0000051,5.38e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!9.82e-12!32;UBERON:0001893!8.93e-11!34;UBERON:0002020!2.59e-10!34;UBERON:0003528!2.59e-10!34;UBERON:0002791!3.25e-10!33;UBERON:0000956!6.60e-10!25;UBERON:0000203!6.60e-10!25;UBERON:0002780!7.35e-10!41;UBERON:0001890!7.35e-10!41;UBERON:0006240!7.35e-10!41;UBERON:0003080!2.28e-09!42;UBERON:0000955!3.05e-09!69;UBERON:0006238!3.05e-09!69;UBERON:0002619!3.20e-09!22;UBERON:0001049!3.97e-09!57;UBERON:0005068!3.97e-09!57;UBERON:0006241!3.97e-09!57;UBERON:0007135!3.97e-09!57;UBERON:0001017!4.96e-09!82;UBERON:0005743!6.87e-09!86;UBERON:0000073!8.37e-09!94;UBERON:0001016!8.37e-09!94;UBERON:0002616!1.30e-08!59;UBERON:0001950!1.39e-08!20;UBERON:0001737!1.28e-07!9;UBERON:0000153!3.85e-07!129;UBERON:0007811!3.85e-07!129;UBERON:0001557!5.45e-07!19 | |ontology_enrichment_uberon=UBERON:0001869!9.82e-12!32;UBERON:0001893!8.93e-11!34;UBERON:0002020!2.59e-10!34;UBERON:0003528!2.59e-10!34;UBERON:0002791!3.25e-10!33;UBERON:0000956!6.60e-10!25;UBERON:0000203!6.60e-10!25;UBERON:0002780!7.35e-10!41;UBERON:0001890!7.35e-10!41;UBERON:0006240!7.35e-10!41;UBERON:0003080!2.28e-09!42;UBERON:0000955!3.05e-09!69;UBERON:0006238!3.05e-09!69;UBERON:0002619!3.20e-09!22;UBERON:0001049!3.97e-09!57;UBERON:0005068!3.97e-09!57;UBERON:0006241!3.97e-09!57;UBERON:0007135!3.97e-09!57;UBERON:0001017!4.96e-09!82;UBERON:0005743!6.87e-09!86;UBERON:0000073!8.37e-09!94;UBERON:0001016!8.37e-09!94;UBERON:0002616!1.30e-08!59;UBERON:0001950!1.39e-08!20;UBERON:0001737!1.28e-07!9;UBERON:0000153!3.85e-07!129;UBERON:0007811!3.85e-07!129;UBERON:0001557!5.45e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.65e-11;32!UBERON:0001893;3.59e-10;34!UBERON:0000956;3.74e-10;25!UBERON:0000203;3.74e-10;25!UBERON:0002791;4.01e-10;32!UBERON:0003528;7.91e-10;34!UBERON:0002020;7.91e-10;34!UBERON:0002619;1.69e-09;22!UBERON:0001950;8.37e-09;20!UBERON:0001737;9.40e-08;9!UBERON:0001557;9.40e-08;9!UBERON:0002780;1.99e-07;41!UBERON:0001890;1.99e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.38e-12,32;UBERON:0001893,7.73e-11,34;UBERON:0002791,2.08e-10,32;UBERON:0003528,2.26e-10,34;UBERON:0002020,2.26e-10,34;UBERON:0000073,5.71e-10,53;UBERON:0002616,5.71e-10,53;UBERON:0000956,5.79e-10,25;UBERON:0000203,5.79e-10,25;UBERON:0002780,6.45e-10,41;UBERON:0001890,6.45e-10,41;UBERON:0003080,6.45e-10,41;UBERON:0006240,6.45e-10,41;UBERON:0000955,1.19e-09,68;UBERON:0006238,1.19e-09,68;UBERON:0001049,1.40e-09,56;UBERON:0005068,1.40e-09,56;UBERON:0006241,1.40e-09,56;UBERON:0007135,1.40e-09,56;UBERON:0001017,2.14e-09,81;UBERON:0002619,2.84e-09,22;UBERON:0001016,3.26e-09,89;UBERON:0001950,1.24e-08,20;UBERON:0010314,3.21e-08,132;UBERON:0010371,1.08e-07,104;UBERON:0001737,1.17e-07,9;UBERON:0003075,1.17e-07,82;UBERON:0007284,1.17e-07,82;UBERON:0001557,5.00e-07,19;UBERON:0002346,9.17e-07,86;UBERON:0003056,9.90e-07,61 | |||
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| ||
|short_description=p4@OXCT1 | |short_description=p4@OXCT1 | ||
}} | }} |
Latest revision as of 22:54, 17 September 2015
Short description: | p4@OXCT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OXCT1_5end |
Coexpression cluster: | C4500_small_frontal_insula_Hep2_non_amygdala_paracentral |
Association with transcript: | 108bp_to_ENST00000196371_5end |
EntrezGene: | OXCT1 |
HGNC: | 8527 |
UniProt: | P55809 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.00e-07 | 52 |
lymphocyte | 5.38e-07 | 53 |
common lymphoid progenitor | 5.38e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 8.38e-12 | 32 |
telencephalon | 7.73e-11 | 34 |
regional part of telencephalon | 2.08e-10 | 32 |
brain grey matter | 2.26e-10 | 34 |
gray matter | 2.26e-10 | 34 |
regional part of nervous system | 5.71e-10 | 53 |
regional part of brain | 5.71e-10 | 53 |
cerebral cortex | 5.79e-10 | 25 |
pallium | 5.79e-10 | 25 |
regional part of forebrain | 6.45e-10 | 41 |
forebrain | 6.45e-10 | 41 |
anterior neural tube | 6.45e-10 | 41 |
future forebrain | 6.45e-10 | 41 |
brain | 1.19e-09 | 68 |
future brain | 1.19e-09 | 68 |
neural tube | 1.40e-09 | 56 |
neural rod | 1.40e-09 | 56 |
future spinal cord | 1.40e-09 | 56 |
neural keel | 1.40e-09 | 56 |
central nervous system | 2.14e-09 | 81 |
regional part of cerebral cortex | 2.84e-09 | 22 |
nervous system | 3.26e-09 | 89 |
neocortex | 1.24e-08 | 20 |
structure with developmental contribution from neural crest | 3.21e-08 | 132 |
ecto-epithelium | 1.08e-07 | 104 |
larynx | 1.17e-07 | 9 |
neural plate | 1.17e-07 | 82 |
presumptive neural plate | 1.17e-07 | 82 |
upper respiratory tract | 5.00e-07 | 19 |
neurectoderm | 9.17e-07 | 86 |
pre-chordal neural plate | 9.90e-07 | 61 |