FFCP PHASE1:Hg19::chr4:48782195..48782206,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:48782195..48782206,- to FFCP PHASE1:Hg19::chr4:48782195..48782206,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285527 | |EntrezGene=285527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29127 | |HGNC=29127 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_ENST00000515684_5end | |||
|cluster_id=chr4:48782195..48782206,- | |||
|description=CAGE_peak_7_at_FRYL_5end | |||
|id=chr4:48782195..48782206,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.02e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.88e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.89e-13!94;UBERON:0001016!7.89e-13!94;UBERON:0001017!9.51e-13!82;UBERON:0005743!7.06e-12!86;UBERON:0000955!3.31e-11!69;UBERON:0006238!3.31e-11!69;UBERON:0003080!2.10e-09!42;UBERON:0000924!3.89e-09!173;UBERON:0006601!3.89e-09!173;UBERON:0002616!4.09e-09!59;UBERON:0004121!4.33e-09!169;UBERON:0002780!5.70e-09!41;UBERON:0001890!5.70e-09!41;UBERON:0006240!5.70e-09!41;UBERON:0001049!1.05e-08!57;UBERON:0005068!1.05e-08!57;UBERON:0006241!1.05e-08!57;UBERON:0007135!1.05e-08!57;UBERON:0001893!5.52e-08!34;UBERON:0002020!6.96e-08!34;UBERON:0003528!6.96e-08!34;UBERON:0002791!1.15e-07!33;UBERON:0000153!1.22e-07!129;UBERON:0007811!1.22e-07!129;UBERON:0000033!2.46e-07!123;UBERON:0007023!5.24e-07!115;UBERON:0001869!6.20e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;5.20e-11;4!UBERON:0001897;3.02e-10;2!UBERON:0010225;3.02e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,3.39e-11,4;UBERON:0001897,8.78e-11,2;UBERON:0010225,8.78e-11,2;UBERON:0003056,4.21e-10,61;UBERON:0001016,1.84e-09,89;UBERON:0001017,2.02e-09,81;UBERON:0002780,2.85e-09,41;UBERON:0001890,2.85e-09,41;UBERON:0003080,2.85e-09,41;UBERON:0006240,2.85e-09,41;UBERON:0003075,3.98e-08,82;UBERON:0007284,3.98e-08,82;UBERON:0004121,4.53e-08,171;UBERON:0000924,4.53e-08,171;UBERON:0006601,4.53e-08,171;UBERON:0001049,8.73e-08,56;UBERON:0005068,8.73e-08,56;UBERON:0006241,8.73e-08,56;UBERON:0007135,8.73e-08,56;UBERON:0002346,1.27e-07,86;UBERON:0010314,2.06e-07,132;UBERON:0010371,7.34e-07,104;UBERON:0000073,8.15e-07,53;UBERON:0002616,8.15e-07,53 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0,0,0,0.572471974262113,0.273748850145768,0.376627918784408,0,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0.232401601740905,0.142169232487422,0,0.553995408531877,0.200544447470142,0,0,0,0.515151135268373,0.436194716338694,0,0,0.232429036905685,0.822335776043652,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0,0,0.320929027076094,0,0.989553900560148,0.797854630486527,0,0,0,0.622822248995575,0.502497330513487,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0.300353785683013,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0.534880391567015,0.289648807765598,2.43806866313962,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0,0.351339142772504,0.392937226493138,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0,0,0.838998872419812,0.275118041940067,0.417989933073621,0.516833518338658,0.71153252537342,0.33472061276467,0,0.760272105718513,0,1.10298924103761,0,0.803697554556718,0.22452937262617,0.675668882899933,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0.538842688278752,0.490385709340376,0.151357427644931,0.576175924479999,0,0.312160076830321,0.570471821544449,0.149448680551801,0.352303495931295,0,0.280901613404497,0,0.245668634623536,0.309977343527296,2.37600571456411,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,1.20036438433761,0.103052529238439,0.257640540045629,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0.169560592310488,0,0.818238361772504,0.286804595389004,0,0.530119073285941,0.348581828608555,0.10366105501537,0.252320850875628,0.72995471815166,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0,0,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0.301586917234893,0.185176890317059,0,0,0,0.695582429850461,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.503946384596579,0.425325291727159,0.358234090811393,0.290633938513962,0,4.43396914106349,0.176096868026452,0.414656231081544,0.720599767084807,1.00993946741104,0.444485260045183,0.763976851116555,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.336255431980582,0,0,0.385029108839245,1.01637849688985,1.30139853857622,0,0.167516265334349,0.637938751653163,0,2.99161459204025,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.35142424497814,0.300946099727719,0,0,0,0,0.173767228936166,0,0.343143423810856,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0.61384789315225,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.577566499444116,0,0,0,0,0,0,0,0.429680979473094,0.290033387828457,0.255679882248303,0,0,0.576570202095319,1.27612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,1.08890984861323,0.847294206991012,0,0,0,0.229723400206959,0,0,0,0,0,0,1.08006287447623,0,0.427296284509893,0,0.245040215981032,0,1.15415370381156,0.711418433484141,0.637705090915289,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0.169291777801603,0,0,0,0,1.22896305723383,0.671028323677248,0.333698283423817,0.19538809540204,0,0,0,0,0,0.37428108081644,0.586032717087576,0.36408156524854,0.222886768554957,0.852408440419239,0.23874448473769,0,0,0,0.140669416410513,0.556543525114529,0.16480387422676,0.844501632511974,0.19924798825107,0.552567831062295,0.755798243562828,0.818149460017238,0.123084805461069,0,0.808815160325942,0.179021174675609,0.511572370226872,0.591860433821602,0,0,0.969332746095218,0.185536196323703,0,0,0.174919999992391,0.724999575434793,0.568967241427498,0,0,0,0.583209226766509,0.347249989866585,0,0.241192877250816,0,0.774054819518572,0,0.219385397153973,0.10893846351899,0.557694977114413,0.538651809526579,0.569710279235006,0.69169171316418,0.269272933229316,0,0.638002319463839,0.0915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| ||
|short_description=p7@FRYL | |||
}} | }} |
Latest revision as of 23:02, 17 September 2015
Short description: | p7@FRYL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FRYL_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000515684_5end |
EntrezGene: | FRYL |
HGNC: | 29127 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 3.39e-11 | 4 |
dorsal plus ventral thalamus | 8.78e-11 | 2 |
thalamic complex | 8.78e-11 | 2 |
pre-chordal neural plate | 4.21e-10 | 61 |
nervous system | 1.84e-09 | 89 |
central nervous system | 2.02e-09 | 81 |
regional part of forebrain | 2.85e-09 | 41 |
forebrain | 2.85e-09 | 41 |
anterior neural tube | 2.85e-09 | 41 |
future forebrain | 2.85e-09 | 41 |
neural plate | 3.98e-08 | 82 |
presumptive neural plate | 3.98e-08 | 82 |
ectoderm-derived structure | 4.53e-08 | 171 |
ectoderm | 4.53e-08 | 171 |
presumptive ectoderm | 4.53e-08 | 171 |
neural tube | 8.73e-08 | 56 |
neural rod | 8.73e-08 | 56 |
future spinal cord | 8.73e-08 | 56 |
neural keel | 8.73e-08 | 56 |
neurectoderm | 1.27e-07 | 86 |
structure with developmental contribution from neural crest | 2.06e-07 | 132 |
ecto-epithelium | 7.34e-07 | 104 |
regional part of nervous system | 8.15e-07 | 53 |
regional part of brain | 8.15e-07 | 53 |